Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:23:53 (32612): wrapper (7.7.26015): starting
10:23:53 (32612): wrapper: running run_atlas (--nthreads 8)
[2026-02-26 10:23:53] Arguments: --nthreads 8
[2026-02-26 10:23:53] Threads: 8
[2026-02-26 10:23:53] Checking for CVMFS
[2026-02-26 10:23:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 10:23:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 10:23:54] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 10:23:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 10:23:54] 2.11.2.0 11495 250356 150892 156659 1 50 11293452 18432001 1833 130560 0 156714398 99.982 9292179 26217 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-26 10:23:54] CVMFS is ok
[2026-02-26 10:23:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 10:23:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 10:23:54] Further information can be found at the LHC@home message board.
[2026-02-26 10:23:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 10:23:54] Checking for apptainer binary...
[2026-02-26 10:23:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 10:23:54] Running /usr/bin/apptainer --version
[2026-02-26 10:23:54] apptainer version 1.3.2-1.el7
[2026-02-26 10:23:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 10:23:55] c-206-31.aglt2.org
[2026-02-26 10:23:55] apptainer works
[2026-02-26 10:23:55] Set ATHENA_PROC_NUMBER=8
[2026-02-26 10:23:55] Set ATHENA_CORE_NUMBER=8
[2026-02-26 10:23:55] Starting ATLAS job with PandaID=7030651393
[2026-02-26 10:23:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 14:41:41]  *** The last 200 lines of the pilot log: ***
[2026-02-26 14:41:41] 2026-02-26 19:40:58,602 | INFO     | extracted standard info from prmon json
[2026-02-26 14:41:41] 2026-02-26 19:40:58,602 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 14:41:41] 2026-02-26 19:40:58,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 14:41:41] 2026-02-26 19:40:58,602 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 14:41:41] 2026-02-26 19:40:58,602 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 14:41:41] 2026-02-26 19:40:58,609 | INFO     | fitting pss+swap vs Time
[2026-02-26 14:41:41] 2026-02-26 19:40:58,610 | INFO     | sum of square deviations: 5021496942.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,613 | INFO     | sum of deviations: -44948110470.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,613 | INFO     | mean x: 1772127159.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,613 | INFO     | mean y: 2563745.7312252964
[2026-02-26 14:41:41] 2026-02-26 19:40:58,613 | INFO     | intersect: 15865117926.217123
[2026-02-26 14:41:41] 2026-02-26 19:40:58,614 | INFO     | chi2: 2.4446399420993234
[2026-02-26 14:41:41] 2026-02-26 19:40:58,614 | INFO     | sum of square deviations: 4729621702.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,617 | INFO     | sum of deviations: -26350194674.5
[2026-02-26 14:41:41] 2026-02-26 19:40:58,617 | INFO     | mean x: 1772127006.5
[2026-02-26 14:41:41] 2026-02-26 19:40:58,617 | INFO     | mean y: 2573316.52016129
[2026-02-26 14:41:41] 2026-02-26 19:40:58,617 | INFO     | intersect: 9875644473.451757
[2026-02-26 14:41:41] 2026-02-26 19:40:58,618 | INFO     | chi2: 1.632394346383677
[2026-02-26 14:41:41] 2026-02-26 19:40:58,618 | INFO     | current chi2=1.632394346383677 (change=33.2255716569097 %)
[2026-02-26 14:41:41] 2026-02-26 19:40:58,619 | INFO     | sum of square deviations: 4449281562.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,621 | INFO     | sum of deviations: -25547607579.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,621 | INFO     | mean x: 1772126854.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,622 | INFO     | mean y: 2573753.160493827
[2026-02-26 14:41:41] 2026-02-26 19:40:58,622 | INFO     | intersect: 10178059573.8081
[2026-02-26 14:41:41] 2026-02-26 19:40:58,622 | INFO     | chi2: 1.6310889918185738
[2026-02-26 14:41:41] 2026-02-26 19:40:58,622 | INFO     | current chi2=1.6310889918185738 (change=0.07996563869477881 %)
[2026-02-26 14:41:41] 2026-02-26 19:40:58,623 | INFO     | right removable region: 242
[2026-02-26 14:41:41] 2026-02-26 19:40:58,623 | INFO     | sum of square deviations: 4729621702.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,626 | INFO     | sum of deviations: -83082154635.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,626 | INFO     | mean x: 1772127311.5
[2026-02-26 14:41:41] 2026-02-26 19:40:58,626 | INFO     | mean y: 2583491.6370967743
[2026-02-26 14:41:41] 2026-02-26 19:40:58,626 | INFO     | intersect: 31132378769.912785
[2026-02-26 14:41:41] 2026-02-26 19:40:58,627 | INFO     | chi2: 1.0613168812063247
[2026-02-26 14:41:41] 2026-02-26 19:40:58,627 | INFO     | current chi2=1.0613168812063247 (change=56.58596331797951 %)
[2026-02-26 14:41:41] 2026-02-26 19:40:58,627 | INFO     | sum of square deviations: 4449281562.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,630 | INFO     | sum of deviations: -80898896986.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,630 | INFO     | mean x: 1772127464.0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,630 | INFO     | mean y: 2582278.576131687
[2026-02-26 14:41:41] 2026-02-26 19:40:58,631 | INFO     | intersect: 32224224168.04876
[2026-02-26 14:41:41] 2026-02-26 19:40:58,631 | INFO     | chi2: 1.048930653479599
[2026-02-26 14:41:41] 2026-02-26 19:40:58,631 | INFO     | current chi2=1.048930653479599 (change=1.1670621607984928 %)
[2026-02-26 14:41:41] 2026-02-26 19:40:58,631 | INFO     | left removable region: 20
[2026-02-26 14:41:41] 2026-02-26 19:40:58,632 | INFO     | sum of square deviations: 3392567795.5
[2026-02-26 14:41:41] 2026-02-26 19:40:58,634 | INFO     | sum of deviations: -48147121239.500015
[2026-02-26 14:41:41] 2026-02-26 19:40:58,634 | INFO     | mean x: 1772127433.5
[2026-02-26 14:41:41] 2026-02-26 19:40:58,634 | INFO     | mean y: 2585759.7702702703
[2026-02-26 14:41:41] 2026-02-26 19:40:58,635 | INFO     | intersect: 25152513347.28766
[2026-02-26 14:41:41] 2026-02-26 19:40:58,635 | INFO     | chi2: 0.20274219188627715
[2026-02-26 14:41:41] 2026-02-26 19:40:58,635 | INFO     | current memory leak: -14.19 B/s (using 222 data points, chi2=0.20)
[2026-02-26 14:41:41] 2026-02-26 19:40:58,636 | INFO     | could have reported an average CPU frequency of 2472 MHz (12 samples)
[2026-02-26 14:41:41] 2026-02-26 19:40:58,636 | INFO     | ..............................
[2026-02-26 14:41:41] 2026-02-26 19:40:58,636 | INFO     | . Timing measurements:
[2026-02-26 14:41:41] 2026-02-26 19:40:58,636 | INFO     | . get job = 0 s
[2026-02-26 14:41:41] 2026-02-26 19:40:58,636 | INFO     | . initial setup = 5 s
[2026-02-26 14:41:41] 2026-02-26 19:40:58,637 | INFO     | . payload setup = 4 s
[2026-02-26 14:41:41] 2026-02-26 19:40:58,637 | INFO     | . stage-in = 0 s
[2026-02-26 14:41:41] 2026-02-26 19:40:58,637 | INFO     | . payload execution = 15384 s
[2026-02-26 14:41:41] 2026-02-26 19:40:58,637 | INFO     | . stage-out = 2 s
[2026-02-26 14:41:41] 2026-02-26 19:40:58,637 | INFO     | . log creation = 0 s
[2026-02-26 14:41:41] 2026-02-26 19:40:58,637 | INFO     | ..............................
[2026-02-26 14:41:41] 2026-02-26 19:40:58,790 | INFO     | 
[2026-02-26 14:41:41] 2026-02-26 19:40:58,790 | INFO     | job summary report
[2026-02-26 14:41:41] 2026-02-26 19:40:58,790 | INFO     | --------------------------------------------------
[2026-02-26 14:41:41] 2026-02-26 19:40:58,790 | INFO     | PanDA job id: 7030651393
[2026-02-26 14:41:41] 2026-02-26 19:40:58,790 | INFO     | task id: 48841995
[2026-02-26 14:41:41] 2026-02-26 19:40:58,791 | INFO     | errors: (none)
[2026-02-26 14:41:41] 2026-02-26 19:40:58,791 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 14:41:41] 2026-02-26 19:40:58,791 | INFO     | pilot state: finished 
[2026-02-26 14:41:41] 2026-02-26 19:40:58,791 | INFO     | transexitcode: 0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,791 | INFO     | exeerrorcode: 0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,791 | INFO     | exeerrordiag: 
[2026-02-26 14:41:41] 2026-02-26 19:40:58,792 | INFO     | exitcode: 0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,792 | INFO     | exitmsg: OK
[2026-02-26 14:41:41] 2026-02-26 19:40:58,792 | INFO     | cpuconsumptiontime: 117438 s
[2026-02-26 14:41:41] 2026-02-26 19:40:58,792 | INFO     | nevents: 400
[2026-02-26 14:41:41] 2026-02-26 19:40:58,792 | INFO     | neventsw: 0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,792 | INFO     | pid: 8796
[2026-02-26 14:41:41] 2026-02-26 19:40:58,793 | INFO     | pgrp: 8796
[2026-02-26 14:41:41] 2026-02-26 19:40:58,793 | INFO     | corecount: 8
[2026-02-26 14:41:41] 2026-02-26 19:40:58,793 | INFO     | event service: False
[2026-02-26 14:41:41] 2026-02-26 19:40:58,793 | INFO     | sizes: {0: 2281735, 1: 2282196, 12: 2282196, 15392: 2313251, 15395: 2322249, 15397: 2322627}
[2026-02-26 14:41:41] 2026-02-26 19:40:58,793 | INFO     | --------------------------------------------------
[2026-02-26 14:41:41] 2026-02-26 19:40:58,793 | INFO     | 
[2026-02-26 14:41:41] 2026-02-26 19:40:58,794 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-26 14:41:41] 2026-02-26 19:40:58,813 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,813 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,813 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,814 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,816 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 14:41:41] 2026-02-26 19:40:58,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,816 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 14:41:41] 2026-02-26 19:40:58,817 | INFO     | job 7030651393 has completed (purged errors)
[2026-02-26 14:41:41] 2026-02-26 19:40:58,817 | INFO     | overall cleanup function is called
[2026-02-26 14:41:41] 2026-02-26 19:40:59,807 | WARNING  | process 8796 can no longer be monitored (due to stat problems) - aborting
[2026-02-26 14:41:41] 2026-02-26 19:40:59,831 | INFO     | --- collectZombieJob: --- 10, [8796]
[2026-02-26 14:41:41] 2026-02-26 19:40:59,831 | INFO     | zombie collector waiting for pid 8796
[2026-02-26 14:41:41] 2026-02-26 19:40:59,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 14:41:41] 2026-02-26 19:40:59,831 | INFO     | collected zombie processes
[2026-02-26 14:41:41] 2026-02-26 19:40:59,831 | INFO     | will attempt to kill all subprocesses of pid=8796
[2026-02-26 14:41:41] 2026-02-26 19:41:00,011 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 14:41:41] 2026-02-26 19:41:00,231 | INFO     | process IDs to be killed: [8796] (in reverse order)
[2026-02-26 14:41:41] 2026-02-26 19:41:00,255 | INFO     | number of running child processes to parent process 8796: 1
[2026-02-26 14:41:41] 2026-02-26 19:41:00,256 | INFO     | maximum number of monitored processes: 6
[2026-02-26 14:41:41] 2026-02-26 19:41:00,256 | INFO     | aborting job monitoring since job object (job id=7030651393) has expired
[2026-02-26 14:41:41] 2026-02-26 19:41:00,287 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 14:41:41] 2026-02-26 19:41:00,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 14:41:41] 2026-02-26 19:41:00,293 | INFO     | did not find any defunct processes belonging to 8796
[2026-02-26 14:41:41] 2026-02-26 19:41:00,297 | INFO     | did not find any defunct processes belonging to 8796
[2026-02-26 14:41:41] 2026-02-26 19:41:00,297 | INFO     | ready for new job
[2026-02-26 14:41:41] 2026-02-26 19:41:00,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 14:41:41] 2026-02-26 19:41:00,300 | INFO     | **************************************
[2026-02-26 14:41:41] 2026-02-26 19:41:00,300 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 14:41:41] 2026-02-26 19:41:00,300 | INFO     | **************************************
[2026-02-26 14:41:41] 2026-02-26 19:41:00,300 | INFO     | 
[2026-02-26 14:41:41] 2026-02-26 19:41:00,302 | INFO     | architecture information:
[2026-02-26 14:41:41] 2026-02-26 19:41:00,304 | INFO     | executing command: cat /etc/os-release
[2026-02-26 14:41:41] 2026-02-26 19:41:00,318 | INFO     | cat /etc/os-release:
[2026-02-26 14:41:41] NAME="CentOS Linux"
[2026-02-26 14:41:41] VERSION="7 (Core)"
[2026-02-26 14:41:41] ID="centos"
[2026-02-26 14:41:41] ID_LIKE="rhel fedora"
[2026-02-26 14:41:41] VERSION_ID="7"
[2026-02-26 14:41:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 14:41:41] ANSI_COLOR="0;31"
[2026-02-26 14:41:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 14:41:41] HOME_URL="https://www.centos.org/"
[2026-02-26 14:41:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 14:41:41] 
[2026-02-26 14:41:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 14:41:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 14:41:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 14:41:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 14:41:41] 
[2026-02-26 14:41:41] 2026-02-26 19:41:00,318 | INFO     | **************************************
[2026-02-26 14:41:41] 2026-02-26 19:41:00,821 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-26 14:41:41] 2026-02-26 19:41:00,843 | INFO     | sufficient remaining disk space (27799846912 B)
[2026-02-26 14:41:41] 2026-02-26 19:41:00,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 14:41:41] 2026-02-26 19:41:00,844 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 14:41:41] 2026-02-26 19:41:00,844 | INFO     | update_server=False
[2026-02-26 14:41:41] 2026-02-26 19:41:00,844 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 14:41:41] 2026-02-26 19:41:00,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 14:41:41] 2026-02-26 19:41:00,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 14:41:41] 2026-02-26 19:41:00,845 | INFO     | will abort loop
[2026-02-26 14:41:41] 2026-02-26 19:41:00,930 | INFO     | all data control threads have been joined
[2026-02-26 14:41:41] 2026-02-26 19:41:01,851 | INFO     | [job] retrieve thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:01,851 | INFO     | [job] job monitor thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:01,935 | INFO     | [data] control thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:02,070 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 14:41:41] 2026-02-26 19:41:02,133 | INFO     | all payload control threads have been joined
[2026-02-26 14:41:41] 2026-02-26 19:41:02,234 | INFO     | [payload] failed_post thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:02,235 | INFO     | all job control threads have been joined
[2026-02-26 14:41:41] 2026-02-26 19:41:02,445 | INFO     | [data] copytool_in thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:02,446 | INFO     | [job] validate thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:02,533 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:02,685 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:02,783 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:03,118 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:03,138 | INFO     | [payload] control thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:03,241 | INFO     | [job] control thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:03,265 | INFO     | [payload] validate_post thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:03,801 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 14:41:41] 2026-02-26 19:41:04,075 | INFO     | [data] copytool_out thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:04,806 | INFO     | [job] queue monitor thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:04,851 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 14:41:41] 2026-02-26 19:41:31,352 | INFO     | PID=4416 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-26 14:41:41] 2026-02-26 19:41:31,353 | INFO     | .. there are 3 such processes running
[2026-02-26 14:41:41] 2026-02-26 19:41:31,353 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 14:41:41] 2026-02-26 19:41:31,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 14:41:41] 2026-02-26 19:41:31,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 14:41:41] 2026-02-26 19:41:34,890 | INFO     | [monitor] cgroup control has ended
[2026-02-26 14:41:41] 2026-02-26 19:41:36,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139955583584064)>', '<ExcThread(monitor, started 139954923497216)>']
[2026-02-26 14:41:41] 2026-02-26 19:41:37,381 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 14:41:41] 2026-02-26 19:41:37,381 | INFO     | [monitor] control thread has ended
[2026-02-26 14:41:41] 2026-02-26 19:41:41,597 | INFO     | all workflow threads have been joined
[2026-02-26 14:41:41] 2026-02-26 19:41:41,597 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 14:41:41] 2026-02-26 19:41:41,597 | INFO     | traces error code: 0
[2026-02-26 14:41:41] 2026-02-26 19:41:41,597 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 14:41:41] 2026-02-26 19:41:41,686 [wrapper] ==== pilot stdout END ====
[2026-02-26 14:41:41] 2026-02-26 19:41:41,690 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 14:41:41] 2026-02-26 19:41:41,693 [wrapper] pilotpid: 4416
[2026-02-26 14:41:41] 2026-02-26 19:41:41,695 [wrapper] Pilot exit status: 0
[2026-02-26 14:41:41] 2026-02-26 19:41:41,706 [wrapper] pandaids: 7030651393
[2026-02-26 14:41:41] 2026-02-26 19:41:41,744 [wrapper] cleanup supervisor_pilot 15700 4417
[2026-02-26 14:41:41] 2026-02-26 19:41:41,746 [wrapper] Test setup, not cleaning
[2026-02-26 14:41:41] 2026-02-26 19:41:41,748 [wrapper] apfmon messages muted
[2026-02-26 14:41:41] 2026-02-26 19:41:41,751 [wrapper] ==== wrapper stdout END ====
[2026-02-26 14:41:41] 2026-02-26 19:41:41,753 [wrapper] ==== wrapper stderr END ====
[2026-02-26 14:41:41]  *** Error codes and diagnostics ***
[2026-02-26 14:41:41]     "exeErrorCode": 0,
[2026-02-26 14:41:41]     "exeErrorDiag": "",
[2026-02-26 14:41:41]     "pilotErrorCode": 0,
[2026-02-26 14:41:41]     "pilotErrorDiag": "",
[2026-02-26 14:41:41]  *** Listing of results directory ***
[2026-02-26 14:41:41] total 584340
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas    584627 Feb 26 04:18 pilot3.tar.gz
[2026-02-26 14:41:41] -rwx------ 1 boincer umatlas     36322 Feb 26 04:20 runpilot2-wrapper.sh
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas      5111 Feb 26 04:21 queuedata.json
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas       100 Feb 26 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 14:41:41] -rwxr-xr-x 1 boincer umatlas      7986 Feb 26 10:23 run_atlas
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas       105 Feb 26 10:23 job.xml
[2026-02-26 14:41:41] -rw-r--r-- 2 boincer umatlas 316571768 Feb 26 10:23 EVNT.48252743._000009.pool.root.1
[2026-02-26 14:41:41] -rw-r--r-- 2 boincer umatlas     15845 Feb 26 10:23 start_atlas.sh
[2026-02-26 14:41:41] drwxrwx--x 2 boincer umatlas      4096 Feb 26 10:23 shared
[2026-02-26 14:41:41] -rw-r--r-- 2 boincer umatlas    597943 Feb 26 10:23 input.tar.gz
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas         0 Feb 26 10:23 boinc_lockfile
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas      2490 Feb 26 10:23 pandaJob.out
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas        57 Feb 26 10:23 setup.sh.local
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas    998423 Feb 26 10:24 agis_schedconf.cvmfs.json
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas       435 Feb 26 10:24 workernode_map.json
[2026-02-26 14:41:41] drwx------ 5 boincer umatlas      4096 Feb 26 10:24 pilot3
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas      5953 Feb 26 14:36 init_data.xml
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas 272588006 Feb 26 14:40 HITS.48841995._000218.pool.root.1
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas       531 Feb 26 14:40 boinc_task_state.xml
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas      1068 Feb 26 14:40 memory_monitor_summary.json
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas   1513015 Feb 26 14:40 agis_ddmendpoints.agis.ALL.json
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas    484873 Feb 26 14:40 log.48841995._000218.job.log.tgz.1
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas      6417 Feb 26 14:40 heartbeat.json
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas      8192 Feb 26 14:41 boinc_mmap_file
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas        29 Feb 26 14:41 wrapper_checkpoint.txt
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas        95 Feb 26 14:41 pilot_heartbeat.json
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas      4818 Feb 26 14:41 pilotlog.txt
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas   2151740 Feb 26 14:41 log.48841995._000218.job.log.1
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas       357 Feb 26 14:41 output.list
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas       620 Feb 26 14:41 runtime_log
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas   2652160 Feb 26 14:41 result.tar.gz
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas      9342 Feb 26 14:41 runtime_log.err
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas       663 Feb 26 14:41 KCJMDmfimF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmdg2KDmAGL9Mn.diag
[2026-02-26 14:41:41] -rw-r--r-- 1 boincer umatlas     21010 Feb 26 14:41 stderr.txt
[2026-02-26 14:41:41] HITS file was successfully produced:
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas 272588006 Feb 26 14:40 shared/HITS.pool.root.1
[2026-02-26 14:41:41]  *** Contents of shared directory: ***
[2026-02-26 14:41:41] total 578552
[2026-02-26 14:41:41] -rw-r--r-- 2 boincer umatlas 316571768 Feb 26 10:23 ATLAS.root_0
[2026-02-26 14:41:41] -rw-r--r-- 2 boincer umatlas     15845 Feb 26 10:23 start_atlas.sh
[2026-02-26 14:41:41] -rw-r--r-- 2 boincer umatlas    597943 Feb 26 10:23 input.tar.gz
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas 272588006 Feb 26 14:40 HITS.pool.root.1
[2026-02-26 14:41:41] -rw------- 1 boincer umatlas   2652160 Feb 26 14:41 result.tar.gz
14:41:43 (32612): run_atlas exited; CPU time 117642.814590
14:41:43 (32612): called boinc_finish(0)

</stderr_txt>
]]>

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