Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:09:28 (3943998): wrapper (7.7.26015): starting
12:09:28 (3943998): wrapper: running run_atlas (--nthreads 12)
[2026-02-26 12:09:28] Arguments: --nthreads 12
[2026-02-26 12:09:28] Threads: 12
[2026-02-26 12:09:28] Checking for CVMFS
[2026-02-26 12:09:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 12:09:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 12:09:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 12:09:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 12:09:29] 2.11.5.0 143847 160997 249392 156665 2 198 26520710 45568001 15048 130560 0 1398697935 99.799 848185516 21539 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-26 12:09:29] CVMFS is ok
[2026-02-26 12:09:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 12:09:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 12:09:29] Further information can be found at the LHC@home message board.
[2026-02-26 12:09:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 12:09:29] Checking for apptainer binary...
[2026-02-26 12:09:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 12:09:29] Running /usr/bin/apptainer --version
[2026-02-26 12:09:29] apptainer version 1.4.1-1.el9
[2026-02-26 12:09:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 12:09:29] wns0057.triumf.lcg
[2026-02-26 12:09:29] apptainer works
[2026-02-26 12:09:29] Set ATHENA_PROC_NUMBER=12
[2026-02-26 12:09:29] Set ATHENA_CORE_NUMBER=12
[2026-02-26 12:09:29] Starting ATLAS job with PandaID=7030815139
[2026-02-26 12:09:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 12:13:31]  *** The last 200 lines of the pilot log: ***
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | WARNING  | found no stored workdir sizes
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | will not add max space = 0 B to job metrics
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | WARNING  | wrong length of table data, x=[1772136639.0], y=[985.0] (must be same and length>=4)
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | could have reported an average CPU frequency of 2602 MHz (4 samples)
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | ..............................
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . Timing measurements:
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . get job = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . initial setup = 19 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . payload setup = 17 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . stage-in = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | . payload execution = 22 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | . stage-out = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | . log creation = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | ..............................
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030815139/pilotlog.txt
[2026-02-26 12:13:31] 2026-02-26 20:12:57,320 | INFO     | time since job start (168s) is within the limit (349056.0s)
[2026-02-26 12:13:31] 2026-02-26 20:12:57,395 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-26 12:13:31] - Log from pilotlog.txt -
[2026-02-26 12:13:31] 2026-02-26 20:12:57,159 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 12:13:31] 2026-02-26 20:12:57,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 12:13:31] 2026-02-26 20:12:57,159 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | WARNING  | found no stored workdir sizes
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | will not add max space = 0 B to job metrics
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | WARNING  | wrong length of table data, x=[1772136639.0], y=[985.0] (must be same and length>=4)
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | could have reported an average CPU frequency of 2602 MHz (4 samples)
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | ..............................
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . Timing measurements:
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . get job = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . initial setup = 19 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . payload setup = 17 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . stage-in = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | . payload execution = 22 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | . stage-out = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | . log creation = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | ..............................
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030815139/pilotlog.txt
[2026-02-26 12:13:31] 2026-02-26 20:12:57,320 | INFO     | time since job start (168s) is within the limit (349056.0s)
[2026-02-26 12:13:31] 2026-02-26 20:12:57,395 | WARNING  | 
[2026-02-26 12:13:31] [begin log extracts]
[2026-02-26 12:13:31] - Log from pilotlog.txt -
[2026-02-26 12:13:31] 2026-02-26 20:12:57,159 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 12:13:31] 2026-02-26 20:12:57,159 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 12:13:31] 2026-02-26 20:12:57,159 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | WARNING  | found no stored workdir sizes
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | will not add max space = 0 B to job metrics
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | WARNING  | wrong length of table data, x=[1772136639.0], y=[985.0] (must be same and length>=4)
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | could have reported an average CPU frequency of 2602 MHz (4 samples)
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | ..............................
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . Timing measurements:
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . get job = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . initial setup = 19 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . payload setup = 17 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,160 | INFO     | . stage-in = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | . payload execution = 22 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | . stage-out = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | . log creation = 0 s
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | ..............................
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-26 12:13:31] 2026-02-26 20:12:57,161 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030815139/pilotlog.txt
[2026-02-26 12:13:31] 2026-02-26 20:12:57,320 | INFO     | time since job start (168s) is within the limit (349056.0s)
[2026-02-26 12:13:31] [end log extracts]
[2026-02-26 12:13:31] 2026-02-26 20:12:57,395 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-26 12:13:31] 2026-02-26 20:12:57,396 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | 
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | job summary report
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | --------------------------------------------------
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | PanDA job id: 7030815139
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | task id: 48842905
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-26 12:10:49,735 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | pilot state: failed 
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | transexitcode: 65
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | exeerrorcode: 65
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | exitcode: 65
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | cpuconsumptiontime: 12 s
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | nevents: 0
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | neventsw: 0
[2026-02-26 12:13:31] 2026-02-26 20:12:58,035 | INFO     | pid: 3952519
[2026-02-26 12:13:31] 2026-02-26 20:12:58,036 | INFO     | pgrp: 3952519
[2026-02-26 12:13:31] 2026-02-26 20:12:58,036 | INFO     | corecount: 12
[2026-02-26 12:13:31] 2026-02-26 20:12:58,036 | INFO     | event service: False
[2026-02-26 12:13:31] 2026-02-26 20:12:58,036 | INFO     | sizes: {0: 2281245, 1: 2281927, 2: 2281955, 3: 2243424, 4: 2282416, 5: 2282444, 44: 2305923, 45: 2305899, 46: 2310247, 163: 2310385}
[2026-02-26 12:13:31] 2026-02-26 20:12:58,036 | INFO     | --------------------------------------------------
[2026-02-26 12:13:31] 2026-02-26 20:12:58,036 | INFO     | 
[2026-02-26 12:13:31] 2026-02-26 20:12:58,036 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-26 12:13:31] 2026-02-26 20:12:58,138 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,138 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,138 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,138 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | job 7030815139 has completed (purged errors)
[2026-02-26 12:13:31] 2026-02-26 20:12:58,139 | INFO     | overall cleanup function is called
[2026-02-26 12:13:31] 2026-02-26 20:12:59,145 | INFO     | --- collectZombieJob: --- 10, [3952519]
[2026-02-26 12:13:31] 2026-02-26 20:12:59,146 | INFO     | zombie collector waiting for pid 3952519
[2026-02-26 12:13:31] 2026-02-26 20:12:59,146 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 12:13:31] 2026-02-26 20:12:59,146 | INFO     | collected zombie processes
[2026-02-26 12:13:31] 2026-02-26 20:12:59,146 | INFO     | will attempt to kill all subprocesses of pid=3952519
[2026-02-26 12:13:31] 2026-02-26 20:13:00,149 | INFO     | process IDs to be killed: [3952519] (in reverse order)
[2026-02-26 12:13:31] 2026-02-26 20:13:00,821 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 12:13:31] 2026-02-26 20:13:00,821 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 12:13:31] 2026-02-26 20:13:00,876 | INFO     | did not find any defunct processes belonging to 3952519
[2026-02-26 12:13:31] 2026-02-26 20:13:00,906 | INFO     | did not find any defunct processes belonging to 3952519
[2026-02-26 12:13:31] 2026-02-26 20:13:00,907 | INFO     | ready for new job
[2026-02-26 12:13:31] 2026-02-26 20:13:00,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 12:13:31] 2026-02-26 20:13:00,908 | INFO     | **************************************
[2026-02-26 12:13:31] 2026-02-26 20:13:00,908 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 12:13:31] 2026-02-26 20:13:00,908 | INFO     | **************************************
[2026-02-26 12:13:31] 2026-02-26 20:13:00,908 | INFO     | 
[2026-02-26 12:13:31] 2026-02-26 20:13:00,924 | INFO     | architecture information:
[2026-02-26 12:13:31] 2026-02-26 20:13:00,937 | INFO     | executing command: cat /etc/os-release
[2026-02-26 12:13:31] 2026-02-26 20:13:00,963 | INFO     | cat /etc/os-release:
[2026-02-26 12:13:31] NAME="CentOS Linux"
[2026-02-26 12:13:31] VERSION="7 (Core)"
[2026-02-26 12:13:31] ID="centos"
[2026-02-26 12:13:31] ID_LIKE="rhel fedora"
[2026-02-26 12:13:31] VERSION_ID="7"
[2026-02-26 12:13:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 12:13:31] ANSI_COLOR="0;31"
[2026-02-26 12:13:31] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 12:13:31] HOME_URL="https://www.centos.org/"
[2026-02-26 12:13:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 12:13:31] 
[2026-02-26 12:13:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 12:13:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 12:13:31] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 12:13:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 12:13:31] 
[2026-02-26 12:13:31] 2026-02-26 20:13:00,963 | INFO     | **************************************
[2026-02-26 12:13:31] 2026-02-26 20:13:01,467 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-26 12:13:31] 2026-02-26 20:13:01,577 | INFO     | sufficient remaining disk space (2140296708096 B)
[2026-02-26 12:13:31] 2026-02-26 20:13:01,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 12:13:31] 2026-02-26 20:13:01,577 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 12:13:31] 2026-02-26 20:13:01,578 | INFO     | update_server=False
[2026-02-26 12:13:31] 2026-02-26 20:13:01,578 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 12:13:31] 2026-02-26 20:13:01,578 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 12:13:31] 2026-02-26 20:13:01,579 | INFO     | aborting loop
[2026-02-26 12:13:31] 2026-02-26 20:13:02,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 12:13:31] 2026-02-26 20:13:02,584 | INFO     | [job] retrieve thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:02,585 | INFO     | [job] job monitor thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:02,609 | INFO     | all payload control threads have been joined
[2026-02-26 12:13:31] 2026-02-26 20:13:02,665 | INFO     | [payload] validate_post thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:02,679 | INFO     | all data control threads have been joined
[2026-02-26 12:13:31] 2026-02-26 20:13:02,697 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:02,743 | INFO     | [job] validate thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:02,908 | INFO     | [data] copytool_in thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:03,021 | INFO     | all job control threads have been joined
[2026-02-26 12:13:31] 2026-02-26 20:13:03,050 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 12:13:31] 2026-02-26 20:13:03,335 | INFO     | [payload] failed_post thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:03,616 | INFO     | [payload] control thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:03,686 | INFO     | [data] control thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:03,813 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:03,930 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:04,028 | INFO     | [job] control thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:04,056 | INFO     | [job] queue monitor thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:04,062 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:04,204 | INFO     | [data] copytool_out thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:04,662 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 12:13:31] 2026-02-26 20:13:08,671 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 12:13:31] 2026-02-26 20:13:08,984 | INFO     | [monitor] cgroup control has ended
[2026-02-26 12:13:31] 2026-02-26 20:13:09,347 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606415910720)>', '<ExcThread(monitor, started 140605862692608)>']
[2026-02-26 12:13:31] 2026-02-26 20:13:14,373 | INFO     | all workflow threads have been joined
[2026-02-26 12:13:31] 2026-02-26 20:13:14,374 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 12:13:31] 2026-02-26 20:13:14,374 | INFO     | traces error code: 0
[2026-02-26 12:13:31] 2026-02-26 20:13:14,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 12:13:31] 2026-02-26 20:13:30,864 | INFO     | PID=3947717 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-26 12:13:31] 2026-02-26 20:13:30,864 | INFO     | .. there are 28 such processes running
[2026-02-26 12:13:31] 2026-02-26 20:13:30,864 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 12:13:31] 2026-02-26 20:13:30,864 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 12:13:31] 2026-02-26 20:13:30,864 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 12:13:31] 2026-02-26 20:13:30,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 12:13:31] 2026-02-26 20:13:30,864 | INFO     | [monitor] control thread has ended
[2026-02-26 12:13:31] 2026-02-26 20:13:30,962 [wrapper] ==== pilot stdout END ====
[2026-02-26 12:13:31] 2026-02-26 20:13:30,964 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 12:13:31] 2026-02-26 20:13:30,966 [wrapper] pilotpid: 3947717
[2026-02-26 12:13:31] 2026-02-26 20:13:30,967 [wrapper] Pilot exit status: 0
[2026-02-26 12:13:31] 2026-02-26 20:13:30,976 [wrapper] pandaids: 7030815139
[2026-02-26 12:13:31] 2026-02-26 20:13:31,019 [wrapper] cleanup supervisor_pilot 3947723 3947718
[2026-02-26 12:13:31] 2026-02-26 20:13:31,020 [wrapper] Test setup, not cleaning
[2026-02-26 12:13:31] 2026-02-26 20:13:31,022 [wrapper] apfmon messages muted
[2026-02-26 12:13:31] 2026-02-26 20:13:31,024 [wrapper] ==== wrapper stdout END ====
[2026-02-26 12:13:31] 2026-02-26 20:13:31,026 [wrapper] ==== wrapper stderr END ====
[2026-02-26 12:13:31]  *** Error codes and diagnostics ***
[2026-02-26 12:13:31]     "exeErrorCode": 65,
[2026-02-26 12:13:31]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-26 12:13:31]     "pilotErrorCode": 1305,
[2026-02-26 12:13:31]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-26 12:13:31]  *** Listing of results directory ***
[2026-02-26 12:13:31] total 238268
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc    584627 Feb 26 06:24 pilot3.tar.gz
[2026-02-26 12:13:31] -rwx------. 1 boinc boinc     36322 Feb 26 06:25 runpilot2-wrapper.sh
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc      5111 Feb 26 06:28 queuedata.json
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc       100 Feb 26 12:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 12:13:31] -rwxr-xr-x. 1 boinc boinc      7986 Feb 26 12:09 run_atlas
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc       105 Feb 26 12:09 job.xml
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc      6593 Feb 26 12:09 init_data.xml
[2026-02-26 12:13:31] -rw-r--r--. 2 boinc boinc 239860355 Feb 26 12:09 EVNT.48449630._000003.pool.root.1
[2026-02-26 12:13:31] -rw-r--r--. 2 boinc boinc     15845 Feb 26 12:09 start_atlas.sh
[2026-02-26 12:13:31] drwxrwx--x. 2 boinc boinc      4096 Feb 26 12:09 shared
[2026-02-26 12:13:31] -rw-r--r--. 2 boinc boinc    597968 Feb 26 12:09 input.tar.gz
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc         0 Feb 26 12:09 boinc_lockfile
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc      2609 Feb 26 12:09 pandaJob.out
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc    997728 Feb 26 12:09 agis_schedconf.cvmfs.json
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc   1513015 Feb 26 12:09 agis_ddmendpoints.agis.ALL.json
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc       445 Feb 26 12:10 workernode_map.json
[2026-02-26 12:13:31] drwx------. 5 boinc boinc      4096 Feb 26 12:10 pilot3
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc       522 Feb 26 12:10 boinc_task_state.xml
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc       982 Feb 26 12:10 memory_monitor_summary.json
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc     20838 Feb 26 12:11 log.48842905._000058.job.log.tgz.1
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc        95 Feb 26 12:12 pilot_heartbeat.json
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc      7043 Feb 26 12:12 heartbeat.json
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc        22 Feb 26 12:13 wrapper_checkpoint.txt
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc       823 Feb 26 12:13 pilotlog.txt
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc      8192 Feb 26 12:13 boinc_mmap_file
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc     81512 Feb 26 12:13 log.48842905._000058.job.log.1
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc       188 Feb 26 12:13 output.list
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc       620 Feb 26 12:13 runtime_log
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc    122880 Feb 26 12:13 result.tar.gz
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc       643 Feb 26 12:13 tNcNDmPUrF9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4J1KDmSvyfGo.diag
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc      8635 Feb 26 12:13 runtime_log.err
[2026-02-26 12:13:31] -rw-r--r--. 1 boinc boinc     21712 Feb 26 12:13 stderr.txt
[2026-02-26 12:13:31] No HITS result produced
[2026-02-26 12:13:31]  *** Contents of shared directory: ***
[2026-02-26 12:13:31] total 234964
[2026-02-26 12:13:31] -rw-r--r--. 2 boinc boinc 239860355 Feb 26 12:09 ATLAS.root_0
[2026-02-26 12:13:31] -rw-r--r--. 2 boinc boinc     15845 Feb 26 12:09 start_atlas.sh
[2026-02-26 12:13:31] -rw-r--r--. 2 boinc boinc    597968 Feb 26 12:09 input.tar.gz
[2026-02-26 12:13:31] -rw-------. 1 boinc boinc    122880 Feb 26 12:13 result.tar.gz
12:13:32 (3943998): run_atlas exited; CPU time 18.512866
12:13:32 (3943998): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN