Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:44:19 (360445): wrapper (7.7.26015): starting
02:44:19 (360445): wrapper: running run_atlas (--nthreads 3)
[2026-02-27 02:44:19] Arguments: --nthreads 3
[2026-02-27 02:44:19] Threads: 3
[2026-02-27 02:44:19] Checking for CVMFS
[2026-02-27 02:44:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-27 02:44:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-27 02:44:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-27 02:44:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-27 02:44:20] 2.9.2.0 50752 2156 73416 156677 1 50 20105591 36864001 0 130560 0 883947 99.978 96845 12455 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-27 02:44:20] CVMFS is ok
[2026-02-27 02:44:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 02:44:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 02:44:20] Further information can be found at the LHC@home message board.
[2026-02-27 02:44:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 02:44:20] Checking for apptainer binary...
[2026-02-27 02:44:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-27 02:44:20] Running /usr/bin/apptainer --version
[2026-02-27 02:44:20] apptainer version 1.4.1-1.1
[2026-02-27 02:44:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 02:44:20] thA371b
[2026-02-27 02:44:20] apptainer works
[2026-02-27 02:44:20] Set ATHENA_PROC_NUMBER=3
[2026-02-27 02:44:20] Set ATHENA_CORE_NUMBER=3
[2026-02-27 02:44:20] Starting ATLAS job with PandaID=7030547316
[2026-02-27 02:44:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 04:18:42]  *** The last 200 lines of the pilot log: ***
[2026-02-27 04:18:42] 2026-02-27 03:17:50,022 | INFO     | [job] job monitor thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:50,022 | INFO     | [job] queue monitor thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:50,052 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:50,052 | INFO     | [payload] control thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:50,168 | INFO     | [payload] failed_post thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:50,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 04:18:42] 2026-02-27 03:17:50,375 | INFO     | [job] control thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:50,657 | INFO     | [payload] validate_post thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:50,777 | INFO     | [data] control thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:50,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 04:18:42] 2026-02-27 03:17:51,168 | INFO     | [job] validate thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:51,293 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:51,364 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:51,524 | INFO     | [data] copytool_in thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:52,330 | INFO     | [data] copytool_out thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:54,854 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:17:59,160 | INFO     | job.realtimelogging is not enabled
[2026-02-27 04:18:42] 2026-02-27 03:18:00,166 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 04:18:42] 2026-02-27 03:18:18,714 | INFO     | PID=364484 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-27 04:18:42] 2026-02-27 03:18:18,715 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 04:18:42] 2026-02-27 03:18:18,715 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 04:18:42] 2026-02-27 03:18:18,715 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 04:18:42] 2026-02-27 03:18:36,336 | INFO     | [monitor] cgroup control has ended
[2026-02-27 04:18:42] 2026-02-27 03:18:37,459 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140621255272256)>', '<ExcThread(monitor, started 140620760860416)>']
[2026-02-27 04:18:42] 2026-02-27 03:18:37,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 04:18:42] 2026-02-27 03:18:37,811 | INFO     | [monitor] control thread has ended
[2026-02-27 04:18:42] 2026-02-27 03:18:42,480 | INFO     | all workflow threads have been joined
[2026-02-27 04:18:42] 2026-02-27 03:18:42,480 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 04:18:42] 2026-02-27 03:18:42,481 | INFO     | traces error code: 0
[2026-02-27 04:18:42] 2026-02-27 03:18:42,481 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 04:18:42] 2026-02-27 03:18:42,532 [wrapper] ==== pilot stdout END ====
[2026-02-27 04:18:42] 2026-02-27 03:18:42,534 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 04:18:42] 2026-02-27 03:18:42,537 [wrapper] pilotpid: 364484
[2026-02-27 04:18:42] 2026-02-27 03:18:42,539 [wrapper] Pilot exit status: 0
[2026-02-27 04:18:42] 2026-02-27 03:18:42,546 [wrapper] pandaids: 7030547316
[2026-02-27 04:18:42] 2026-02-27 03:18:42,562 [wrapper] cleanup supervisor_pilot  374071 364485
[2026-02-27 04:18:42] 2026-02-27 03:18:42,565 [wrapper] Test setup, not cleaning
[2026-02-27 04:18:42] 2026-02-27 03:18:42,567 [wrapper] apfmon messages muted
[2026-02-27 04:18:42] 2026-02-27 03:18:42,569 [wrapper] ==== wrapper stdout END ====
[2026-02-27 04:18:42] 2026-02-27 03:18:42,571 [wrapper] ==== wrapper stderr END ====
[2026-02-27 04:18:42]  *** Error codes and diagnostics ***
[2026-02-27 04:18:42]     "exeErrorCode": 0,
[2026-02-27 04:18:42]     "exeErrorDiag": "",
[2026-02-27 04:18:42]     "pilotErrorCode": 0,
[2026-02-27 04:18:42]     "pilotErrorDiag": "",
[2026-02-27 04:18:42]  *** Listing of results directory ***
[2026-02-27 04:18:42] total 495492
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc    584627 Feb 26 08:13 pilot3.tar.gz
[2026-02-27 04:18:42] -rwx------ 1 boinc boinc     36322 Feb 26 08:16 runpilot2-wrapper.sh
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc      5111 Feb 26 08:18 queuedata.json
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc       100 Feb 27 02:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 04:18:42] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 02:44 run_atlas
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc       105 Feb 27 02:44 job.xml
[2026-02-27 04:18:42] -rw-r--r-- 2 boinc boinc 283631240 Feb 27 02:44 EVNT.48220117._000023.pool.root.1
[2026-02-27 04:18:42] -rw-r--r-- 2 boinc boinc    597968 Feb 27 02:44 input.tar.gz
[2026-02-27 04:18:42] -rw-r--r-- 2 boinc boinc     15845 Feb 27 02:44 start_atlas.sh
[2026-02-27 04:18:42] drwxrwx--x 2 boinc boinc      4096 Feb 27 02:44 shared
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc         0 Feb 27 02:44 boinc_setup_complete
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc      6440 Feb 27 02:44 init_data.xml
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc         0 Feb 27 02:44 boinc_lockfile
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc      2570 Feb 27 02:44 pandaJob.out
[2026-02-27 04:18:42] -rw------- 1 boinc boinc    998489 Feb 27 02:44 agis_schedconf.cvmfs.json
[2026-02-27 04:18:42] -rw------- 1 boinc boinc   1513015 Feb 27 02:44 agis_ddmendpoints.agis.ALL.json
[2026-02-27 04:18:42] -rw------- 1 boinc boinc       428 Feb 27 02:44 workernode_map.json
[2026-02-27 04:18:42] drwx------ 5 boinc boinc      4096 Feb 27 02:44 pilot3
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc       529 Feb 27 04:17 boinc_task_state.xml
[2026-02-27 04:18:42] -rw------- 1 boinc boinc 217686010 Feb 27 04:17 HITS.48838447._000565.pool.root.1
[2026-02-27 04:18:42] -rw------- 1 boinc boinc      1018 Feb 27 04:17 memory_monitor_summary.json
[2026-02-27 04:18:42] -rw------- 1 boinc boinc    266126 Feb 27 04:17 log.48838447._000565.job.log.tgz.1
[2026-02-27 04:18:42] -rw------- 1 boinc boinc      6309 Feb 27 04:17 heartbeat.json
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc      8192 Feb 27 04:18 boinc_mmap_file
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc        27 Feb 27 04:18 wrapper_checkpoint.txt
[2026-02-27 04:18:42] -rw------- 1 boinc boinc        95 Feb 27 04:18 pilot_heartbeat.json
[2026-02-27 04:18:42] -rw------- 1 boinc boinc      4819 Feb 27 04:18 pilotlog.txt
[2026-02-27 04:18:42] -rw------- 1 boinc boinc    814970 Feb 27 04:18 log.48838447._000565.job.log.1
[2026-02-27 04:18:42] -rw------- 1 boinc boinc       357 Feb 27 04:18 output.list
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc       620 Feb 27 04:18 runtime_log
[2026-02-27 04:18:42] -rw------- 1 boinc boinc   1095680 Feb 27 04:18 result.tar.gz
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc      8901 Feb 27 04:18 runtime_log.err
[2026-02-27 04:18:42] -rw------- 1 boinc boinc       658 Feb 27 04:18 axLKDmkmkF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmLi0KDmDXwW3m.diag
[2026-02-27 04:18:42] -rw-r--r-- 1 boinc boinc      6555 Feb 27 04:18 stderr.txt
[2026-02-27 04:18:42] HITS file was successfully produced:
[2026-02-27 04:18:42] -rw------- 1 boinc boinc 217686010 Feb 27 04:17 shared/HITS.pool.root.1
[2026-02-27 04:18:42]  *** Contents of shared directory: ***
[2026-02-27 04:18:42] total 491248
[2026-02-27 04:18:42] -rw-r--r-- 2 boinc boinc 283631240 Feb 27 02:44 ATLAS.root_0
[2026-02-27 04:18:42] -rw-r--r-- 2 boinc boinc    597968 Feb 27 02:44 input.tar.gz
[2026-02-27 04:18:42] -rw-r--r-- 2 boinc boinc     15845 Feb 27 02:44 start_atlas.sh
[2026-02-27 04:18:42] -rw------- 1 boinc boinc 217686010 Feb 27 04:17 HITS.pool.root.1
[2026-02-27 04:18:42] -rw------- 1 boinc boinc   1095680 Feb 27 04:18 result.tar.gz
04:18:44 (360445): run_atlas exited; CPU time 16111.893487
04:18:44 (360445): called boinc_finish(0)

</stderr_txt>
]]>

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