Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:12:29 (1738067): wrapper (7.7.26015): starting
19:12:29 (1738067): wrapper: running run_atlas (--nthreads 4)
[2026-02-26 19:12:29] Arguments: --nthreads 4
[2026-02-26 19:12:29] Threads: 4
[2026-02-26 19:12:29] Checking for CVMFS
[2026-02-26 19:12:29] No cvmfs_config command found, will try listing directly
[2026-02-26 19:12:29] CVMFS is ok
[2026-02-26 19:12:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 19:12:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 19:12:29] Further information can be found at the LHC@home message board.
[2026-02-26 19:12:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 19:12:29] Checking for apptainer binary...
[2026-02-26 19:12:29] which: no apptainer in ((null))
[2026-02-26 19:12:29] apptainer is not installed, using version from CVMFS
[2026-02-26 19:12:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 19:12:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-26 19:12:30] apptainer works
[2026-02-26 19:12:30] Set ATHENA_PROC_NUMBER=4
[2026-02-26 19:12:30] Set ATHENA_CORE_NUMBER=4
[2026-02-26 19:12:30] Starting ATLAS job with PandaID=7030567218
[2026-02-26 19:12:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 22:14:57]  *** The last 200 lines of the pilot log: ***
[2026-02-26 22:14:57] 2026-02-26 21:13:15,907 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 22:14:57] 2026-02-26 21:13:15,907 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 22:14:57] 2026-02-26 21:13:15,907 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 22:14:57] 2026-02-26 21:13:15,911 | INFO     | fitting pss+swap vs Time
[2026-02-26 22:14:57] 2026-02-26 21:13:15,911 | INFO     | sum of square deviations: 1719429448.0
[2026-02-26 22:14:57] 2026-02-26 21:13:15,912 | INFO     | sum of deviations: 11093736086.000002
[2026-02-26 22:14:57] 2026-02-26 21:13:15,912 | INFO     | mean x: 1772134968.0
[2026-02-26 22:14:57] 2026-02-26 21:13:15,912 | INFO     | mean y: 2335073.757062147
[2026-02-26 22:14:57] 2026-02-26 21:13:15,913 | INFO     | intersect: -11431456331.078793
[2026-02-26 22:14:57] 2026-02-26 21:13:15,913 | INFO     | chi2: 1.3616762832997575
[2026-02-26 22:14:57] 2026-02-26 21:13:15,913 | INFO     | sum of square deviations: 1577789583.0
[2026-02-26 22:14:57] 2026-02-26 21:13:15,914 | INFO     | sum of deviations: 10821350834.000004
[2026-02-26 22:14:57] 2026-02-26 21:13:15,915 | INFO     | mean x: 1772134815.5
[2026-02-26 22:14:57] 2026-02-26 21:13:15,915 | INFO     | mean y: 2334780.802325581
[2026-02-26 22:14:57] 2026-02-26 21:13:15,915 | INFO     | intersect: -12151942804.937933
[2026-02-26 22:14:57] 2026-02-26 21:13:15,915 | INFO     | chi2: 1.3627095183854323
[2026-02-26 22:14:57] 2026-02-26 21:13:15,915 | INFO     | current chi2=1.3627095183854323 (change=-0.0758796417582395 %)
[2026-02-26 22:14:57] 2026-02-26 21:13:15,915 | INFO     | right removable region: 171
[2026-02-26 22:14:57] 2026-02-26 21:13:15,916 | INFO     | sum of square deviations: 1577789583.0
[2026-02-26 22:14:57] 2026-02-26 21:13:15,917 | INFO     | sum of deviations: -11338651147.0
[2026-02-26 22:14:57] 2026-02-26 21:13:15,917 | INFO     | mean x: 1772135120.5
[2026-02-26 22:14:57] 2026-02-26 21:13:15,917 | INFO     | mean y: 2358864.534883721
[2026-02-26 22:14:57] 2026-02-26 21:13:15,917 | INFO     | intersect: 12737657749.25081
[2026-02-26 22:14:57] 2026-02-26 21:13:15,917 | INFO     | chi2: 0.02203550760185781
[2026-02-26 22:14:57] 2026-02-26 21:13:15,918 | INFO     | current chi2=0.02203550760185781 (change=98.38173669673829 %)
[2026-02-26 22:14:57] 2026-02-26 21:13:15,918 | INFO     | sum of square deviations: 1444149868.0
[2026-02-26 22:14:57] 2026-02-26 21:13:15,919 | INFO     | sum of deviations: -9321463070.000002
[2026-02-26 22:14:57] 2026-02-26 21:13:15,919 | INFO     | mean x: 1772135273.0
[2026-02-26 22:14:57] 2026-02-26 21:13:15,919 | INFO     | mean y: 2356556.083832335
[2026-02-26 22:14:57] 2026-02-26 21:13:15,919 | INFO     | intersect: 11440846333.596226
[2026-02-26 22:14:57] 2026-02-26 21:13:15,919 | INFO     | chi2: 0.02030241592874511
[2026-02-26 22:14:57] 2026-02-26 21:13:15,920 | INFO     | current chi2=0.02030241592874511 (change=7.864995462898179 %)
[2026-02-26 22:14:57] 2026-02-26 21:13:15,920 | INFO     | left removable region: 20
[2026-02-26 22:14:57] 2026-02-26 21:13:15,920 | INFO     | sum of square deviations: 1067554900.0
[2026-02-26 22:14:57] 2026-02-26 21:13:15,921 | INFO     | sum of deviations: -3773127977.0
[2026-02-26 22:14:57] 2026-02-26 21:13:15,921 | INFO     | mean x: 1772135395.0
[2026-02-26 22:14:57] 2026-02-26 21:13:15,921 | INFO     | mean y: 2349971.284768212
[2026-02-26 22:14:57] 2026-02-26 21:13:15,921 | INFO     | intersect: 6265722129.387781
[2026-02-26 22:14:57] 2026-02-26 21:13:15,921 | INFO     | chi2: 0.007336954328999597
[2026-02-26 22:14:57] 2026-02-26 21:13:15,922 | INFO     | current memory leak: -3.53 B/s (using 151 data points, chi2=0.01)
[2026-02-26 22:14:57] 2026-02-26 21:13:15,922 | INFO     | could have reported an average CPU frequency of 2723 MHz (9 samples)
[2026-02-26 22:14:57] 2026-02-26 21:13:15,922 | INFO     | ..............................
[2026-02-26 22:14:57] 2026-02-26 21:13:15,923 | INFO     | . Timing measurements:
[2026-02-26 22:14:57] 2026-02-26 21:13:15,923 | INFO     | . get job = 0 s
[2026-02-26 22:14:57] 2026-02-26 21:13:15,923 | INFO     | . initial setup = 8 s
[2026-02-26 22:14:57] 2026-02-26 21:13:15,923 | INFO     | . payload setup = 8 s
[2026-02-26 22:14:57] 2026-02-26 21:13:15,923 | INFO     | . stage-in = 0 s
[2026-02-26 22:14:57] 2026-02-26 21:13:15,923 | INFO     | . payload execution = 10793 s
[2026-02-26 22:14:57] 2026-02-26 21:13:15,923 | INFO     | . stage-out = 1 s
[2026-02-26 22:14:57] 2026-02-26 21:13:15,923 | INFO     | . log creation = 0 s
[2026-02-26 22:14:57] 2026-02-26 21:13:15,923 | INFO     | ..............................
[2026-02-26 22:14:57] 2026-02-26 21:13:16,021 | INFO     | 
[2026-02-26 22:14:57] 2026-02-26 21:13:16,022 | INFO     | job summary report
[2026-02-26 22:14:57] 2026-02-26 21:13:16,022 | INFO     | --------------------------------------------------
[2026-02-26 22:14:57] 2026-02-26 21:13:16,022 | INFO     | PanDA job id: 7030567218
[2026-02-26 22:14:57] 2026-02-26 21:13:16,022 | INFO     | task id: 48838521
[2026-02-26 22:14:57] 2026-02-26 21:13:16,023 | INFO     | errors: (none)
[2026-02-26 22:14:57] 2026-02-26 21:13:16,023 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 22:14:57] 2026-02-26 21:13:16,023 | INFO     | pilot state: finished 
[2026-02-26 22:14:57] 2026-02-26 21:13:16,023 | INFO     | transexitcode: 0
[2026-02-26 22:14:57] 2026-02-26 21:13:16,023 | INFO     | exeerrorcode: 0
[2026-02-26 22:14:57] 2026-02-26 21:13:16,023 | INFO     | exeerrordiag: 
[2026-02-26 22:14:57] 2026-02-26 21:13:16,023 | INFO     | exitcode: 0
[2026-02-26 22:14:57] 2026-02-26 21:13:16,024 | INFO     | exitmsg: OK
[2026-02-26 22:14:57] 2026-02-26 21:13:16,024 | INFO     | cpuconsumptiontime: 41463 s
[2026-02-26 22:14:57] 2026-02-26 21:13:16,024 | INFO     | nevents: 400
[2026-02-26 22:14:57] 2026-02-26 21:13:16,024 | INFO     | neventsw: 0
[2026-02-26 22:14:57] 2026-02-26 21:13:16,024 | INFO     | pid: 1747522
[2026-02-26 22:14:57] 2026-02-26 21:13:16,024 | INFO     | pgrp: 1747522
[2026-02-26 22:14:57] 2026-02-26 21:13:16,024 | INFO     | corecount: 4
[2026-02-26 22:14:57] 2026-02-26 21:13:16,024 | INFO     | event service: False
[2026-02-26 22:14:57] 2026-02-26 21:13:16,024 | INFO     | sizes: {0: 2281848, 1: 2282309, 11: 2282309, 10805: 2311722, 10806: 2320744, 10809: 2320800, 10812: 2321186}
[2026-02-26 22:14:57] 2026-02-26 21:13:16,025 | INFO     | --------------------------------------------------
[2026-02-26 22:14:57] 2026-02-26 21:13:16,025 | INFO     | 
[2026-02-26 22:14:57] 2026-02-26 21:13:16,025 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-02-26 22:14:57] 2026-02-26 21:13:16,062 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,062 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,062 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,062 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,063 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,063 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,063 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,064 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,064 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,064 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 22:14:57] 2026-02-26 21:13:16,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,064 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 22:14:57] 2026-02-26 21:13:16,064 | INFO     | job 7030567218 has completed (purged errors)
[2026-02-26 22:14:57] 2026-02-26 21:13:16,065 | INFO     | overall cleanup function is called
[2026-02-26 22:14:57] 2026-02-26 21:13:16,533 | WARNING  | process 1747522 can no longer be monitored (due to stat problems) - aborting
[2026-02-26 22:14:57] 2026-02-26 21:13:17,075 | INFO     | --- collectZombieJob: --- 10, [1747522]
[2026-02-26 22:14:57] 2026-02-26 21:13:17,076 | INFO     | zombie collector waiting for pid 1747522
[2026-02-26 22:14:57] 2026-02-26 21:13:17,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 22:14:57] 2026-02-26 21:13:17,076 | INFO     | collected zombie processes
[2026-02-26 22:14:57] 2026-02-26 21:13:17,076 | INFO     | will attempt to kill all subprocesses of pid=1747522
[2026-02-26 22:14:57] 2026-02-26 21:13:17,105 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 22:14:57] 2026-02-26 21:13:17,106 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 22:14:57] 2026-02-26 21:13:17,107 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-26 22:14:57] 2026-02-26 21:13:17,107 | WARNING  | maxPSS not found in memory monitor output
[2026-02-26 22:14:57] 2026-02-26 21:13:17,107 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot116/slots/0/PanDA_Pilot-7030567218/payload.stdout) since it has not been created yet
[2026-02-26 22:14:57] 2026-02-26 21:13:17,108 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-02-26 22:14:57] 2026-02-26 21:13:17,134 | INFO     | sufficient remaining disk space (3316564099072 B)
[2026-02-26 22:14:57] 2026-02-26 21:13:17,134 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-26 22:14:57] 2026-02-26 21:13:17,134 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-7030567218/HITS.48838521._000168.pool.root.1 since it does not exist
[2026-02-26 22:14:57] 2026-02-26 21:13:19,043 | INFO     | process IDs to be killed: [1747522] (in reverse order)
[2026-02-26 22:14:57] 2026-02-26 21:13:19,064 | INFO     | number of running child processes to parent process 1747522: 1
[2026-02-26 22:14:57] 2026-02-26 21:13:19,065 | INFO     | maximum number of monitored processes: 6
[2026-02-26 22:14:57] 2026-02-26 21:13:19,065 | INFO     | aborting job monitoring since job object (job id=7030567218) has expired
[2026-02-26 22:14:57] 2026-02-26 21:13:19,380 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 22:14:57] 2026-02-26 21:13:19,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 22:14:57] 2026-02-26 21:13:19,407 | INFO     | did not find any defunct processes belonging to 1747522
[2026-02-26 22:14:57] 2026-02-26 21:13:19,428 | INFO     | did not find any defunct processes belonging to 1747522
[2026-02-26 22:14:57] 2026-02-26 21:13:19,428 | INFO     | ready for new job
[2026-02-26 22:14:57] 2026-02-26 21:13:19,429 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 22:14:57] 2026-02-26 21:13:19,431 | INFO     | **************************************
[2026-02-26 22:14:57] 2026-02-26 21:13:19,431 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 22:14:57] 2026-02-26 21:13:19,431 | INFO     | **************************************
[2026-02-26 22:14:57] 2026-02-26 21:13:19,431 | INFO     | 
[2026-02-26 22:14:57] 2026-02-26 21:13:19,439 | INFO     | architecture information:
[2026-02-26 22:14:57] 2026-02-26 21:13:19,439 | INFO     | executing command: cat /etc/os-release
[2026-02-26 22:14:57] 2026-02-26 21:13:19,467 | INFO     | cat /etc/os-release:
[2026-02-26 22:14:57] NAME="CentOS Linux"
[2026-02-26 22:14:57] VERSION="7 (Core)"
[2026-02-26 22:14:57] ID="centos"
[2026-02-26 22:14:57] ID_LIKE="rhel fedora"
[2026-02-26 22:14:57] VERSION_ID="7"
[2026-02-26 22:14:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 22:14:57] ANSI_COLOR="0;31"
[2026-02-26 22:14:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 22:14:57] HOME_URL="https://www.centos.org/"
[2026-02-26 22:14:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 22:14:57] 
[2026-02-26 22:14:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 22:14:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 22:14:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 22:14:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 22:14:57] 
[2026-02-26 22:14:57] 2026-02-26 21:13:19,467 | INFO     | **************************************
[2026-02-26 22:14:57] 2026-02-26 21:13:19,970 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-02-26 22:14:57] 2026-02-26 21:13:19,993 | INFO     | sufficient remaining disk space (3316565147648 B)
[2026-02-26 22:14:57] 2026-02-26 21:13:19,994 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 22:14:57] 2026-02-26 21:13:19,994 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 22:14:57] 2026-02-26 21:13:19,994 | INFO     | update_server=False
[2026-02-26 22:14:57] 2026-02-26 21:13:19,994 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 22:14:57] 2026-02-26 21:13:19,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 22:14:57] 2026-02-26 21:13:19,995 | INFO     | will abort loop
[2026-02-26 22:14:57] 2026-02-26 21:13:20,586 | INFO     | all payload control threads have been joined
[2026-02-26 22:14:57] 2026-02-26 21:13:20,860 | INFO     | all job control threads have been joined
[2026-02-26 22:14:57] 2026-02-26 21:13:21,000 | INFO     | [job] retrieve thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:21,001 | INFO     | [job] job monitor thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:21,002 | INFO     | [payload] failed_post thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:21,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 22:14:57] 2026-02-26 21:13:21,057 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 22:14:57] 2026-02-26 21:13:21,058 | INFO     | all data control threads have been joined
[2026-02-26 22:14:57] 2026-02-26 21:13:21,452 | INFO     | [job] validate thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:21,496 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:21,560 | INFO     | [payload] validate_post thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:21,591 | INFO     | [payload] control thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:21,792 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:21,865 | INFO     | [job] control thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:22,036 | INFO     | [job] queue monitor thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:22,063 | INFO     | [data] control thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:22,129 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:22,378 | INFO     | [data] copytool_in thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:23,063 | INFO     | [data] copytool_out thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:23,385 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 22:14:57] 2026-02-26 21:13:27,391 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:30,662 | INFO     | job.realtimelogging is not enabled
[2026-02-26 22:14:57] 2026-02-26 21:13:31,667 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 22:14:57] 2026-02-26 21:13:48,889 | INFO     | PID=1742377 has CPU usage=15.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-26 22:14:57] 2026-02-26 21:13:48,889 | INFO     | .. there are 21 such processes running
[2026-02-26 22:14:57] 2026-02-26 21:13:48,889 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 22:14:57] 2026-02-26 21:13:48,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 22:14:57] 2026-02-26 21:13:48,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 22:14:57] 2026-02-26 21:14:09,672 | INFO     | [monitor] cgroup control has ended
[2026-02-26 22:14:57] 2026-02-26 21:14:11,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23177211221824)>', '<ExcThread(monitor, started 23176972351232)>']
[2026-02-26 22:14:57] 2026-02-26 21:14:12,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 22:14:57] 2026-02-26 21:14:12,005 | INFO     | [monitor] control thread has ended
[2026-02-26 22:14:57] 2026-02-26 21:14:16,116 | INFO     | all workflow threads have been joined
[2026-02-26 22:14:57] 2026-02-26 21:14:16,117 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 22:14:57] 2026-02-26 21:14:16,117 | INFO     | traces error code: 0
[2026-02-26 22:14:57] 2026-02-26 21:14:16,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 22:14:57] 2026-02-26 21:14:16,283 [wrapper] ==== pilot stdout END ====
[2026-02-26 22:14:57] 2026-02-26 21:14:16,309 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 22:14:57] 2026-02-26 21:14:16,338 [wrapper] pilotpid: 1742377
[2026-02-26 22:14:57] 2026-02-26 21:14:16,355 [wrapper] Pilot exit status: 0
[2026-02-26 22:14:57] 2026-02-26 21:14:16,395 [wrapper] pandaids: 7030567218
[2026-02-26 22:14:57] 2026-02-26 21:14:16,592 [wrapper] cleanup supervisor_pilot 2111152 1742378
[2026-02-26 22:14:57] 2026-02-26 21:14:16,596 [wrapper] Test setup, not cleaning
[2026-02-26 22:14:57] 2026-02-26 21:14:16,600 [wrapper] apfmon messages muted
[2026-02-26 22:14:57] 2026-02-26 21:14:16,604 [wrapper] ==== wrapper stdout END ====
[2026-02-26 22:14:57] 2026-02-26 21:14:16,609 [wrapper] ==== wrapper stderr END ====
[2026-02-26 22:14:57]  *** Error codes and diagnostics ***
[2026-02-26 22:14:57]     "exeErrorCode": 0,
[2026-02-26 22:14:57]     "exeErrorDiag": "",
[2026-02-26 22:14:57]     "pilotErrorCode": 0,
[2026-02-26 22:14:57]     "pilotErrorDiag": "",
[2026-02-26 22:14:57]  *** Listing of results directory ***
[2026-02-26 22:14:57] total 470676
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc    584627 Feb 26 08:13 pilot3.tar.gz
[2026-02-26 22:14:57] -rwx------ 1 boinc boinc     36322 Feb 26 08:14 runpilot2-wrapper.sh
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc      5111 Feb 26 08:15 queuedata.json
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc       100 Feb 26 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 22:14:57] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 19:12 run_atlas
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc       105 Feb 26 19:12 job.xml
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc      6700 Feb 26 19:12 init_data.xml
[2026-02-26 22:14:57] -rw-r--r-- 2 boinc boinc 270852599 Feb 26 19:12 EVNT.48343683._000007.pool.root.1
[2026-02-26 22:14:57] -rw-r--r-- 2 boinc boinc     15845 Feb 26 19:12 start_atlas.sh
[2026-02-26 22:14:57] drwxrwx--x 2 boinc boinc      4096 Feb 26 19:12 shared
[2026-02-26 22:14:57] -rw-r--r-- 2 boinc boinc    597953 Feb 26 19:12 input.tar.gz
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc         0 Feb 26 19:12 boinc_lockfile
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc      2561 Feb 26 19:12 pandaJob.out
[2026-02-26 22:14:57] -rw------- 1 boinc boinc    998467 Feb 26 19:12 agis_schedconf.cvmfs.json
[2026-02-26 22:14:57] -rw------- 1 boinc boinc       444 Feb 26 19:12 workernode_map.json
[2026-02-26 22:14:57] drwx------ 5 boinc boinc      4096 Feb 26 19:12 pilot3
[2026-02-26 22:14:57] -rw------- 1 boinc boinc 203434136 Feb 26 22:12 HITS.48838521._000168.pool.root.1
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc       529 Feb 26 22:12 boinc_task_state.xml
[2026-02-26 22:14:57] -rw------- 1 boinc boinc      1028 Feb 26 22:13 memory_monitor_summary.json
[2026-02-26 22:14:57] -rw------- 1 boinc boinc   1513015 Feb 26 22:13 agis_ddmendpoints.agis.ALL.json
[2026-02-26 22:14:57] -rw------- 1 boinc boinc    359600 Feb 26 22:13 log.48838521._000168.job.log.tgz.1
[2026-02-26 22:14:57] -rw------- 1 boinc boinc        95 Feb 26 22:13 pilot_heartbeat.json
[2026-02-26 22:14:57] -rw------- 1 boinc boinc      6350 Feb 26 22:13 heartbeat.json
[2026-02-26 22:14:57] -rw------- 1 boinc boinc      4907 Feb 26 22:14 pilotlog.txt
[2026-02-26 22:14:57] -rw------- 1 boinc boinc   1515905 Feb 26 22:14 log.48838521._000168.job.log.1
[2026-02-26 22:14:57] -rw------- 1 boinc boinc       357 Feb 26 22:14 output.list
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc       620 Feb 26 22:14 runtime_log
[2026-02-26 22:14:57] -rw------- 1 boinc boinc   1894400 Feb 26 22:14 result.tar.gz
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc      9222 Feb 26 22:14 runtime_log.err
[2026-02-26 22:14:57] -rw------- 1 boinc boinc       666 Feb 26 22:14 ODaNDmfkkF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmue0KDmC9lXSo.diag
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc        26 Feb 26 22:14 wrapper_checkpoint.txt
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc      8192 Feb 26 22:14 boinc_mmap_file
[2026-02-26 22:14:57] -rw-r--r-- 1 boinc boinc     21304 Feb 26 22:14 stderr.txt
[2026-02-26 22:14:57] HITS file was successfully produced:
[2026-02-26 22:14:57] -rw------- 1 boinc boinc 203434136 Feb 26 22:12 shared/HITS.pool.root.1
[2026-02-26 22:14:57]  *** Contents of shared directory: ***
[2026-02-26 22:14:57] total 465636
[2026-02-26 22:14:57] -rw-r--r-- 2 boinc boinc 270852599 Feb 26 19:12 ATLAS.root_0
[2026-02-26 22:14:57] -rw-r--r-- 2 boinc boinc     15845 Feb 26 19:12 start_atlas.sh
[2026-02-26 22:14:57] -rw-r--r-- 2 boinc boinc    597953 Feb 26 19:12 input.tar.gz
[2026-02-26 22:14:57] -rw------- 1 boinc boinc 203434136 Feb 26 22:12 HITS.pool.root.1
[2026-02-26 22:14:57] -rw------- 1 boinc boinc   1894400 Feb 26 22:14 result.tar.gz
22:14:58 (1738067): run_atlas exited; CPU time 42106.556941
22:14:58 (1738067): called boinc_finish(0)

</stderr_txt>
]]>

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