Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:40:40 (3510215): wrapper (7.7.26015): starting
11:40:40 (3510215): wrapper: running run_atlas (--nthreads 4)
[2026-02-27 11:40:40] Arguments: --nthreads 4
[2026-02-27 11:40:40] Threads: 4
[2026-02-27 11:40:40] Checking for CVMFS
[2026-02-27 11:40:40] No cvmfs_config command found, will try listing directly
[2026-02-27 11:40:40] CVMFS is ok
[2026-02-27 11:40:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 11:40:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 11:40:40] Further information can be found at the LHC@home message board.
[2026-02-27 11:40:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 11:40:40] Checking for apptainer binary...
[2026-02-27 11:40:40] which: no apptainer in ((null))
[2026-02-27 11:40:40] apptainer is not installed, using version from CVMFS
[2026-02-27 11:40:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 11:40:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-27 11:40:40] apptainer works
[2026-02-27 11:40:40] Set ATHENA_PROC_NUMBER=4
[2026-02-27 11:40:40] Set ATHENA_CORE_NUMBER=4
[2026-02-27 11:40:40] Starting ATLAS job with PandaID=7030547879
[2026-02-27 11:40:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 14:57:17]  *** The last 200 lines of the pilot log: ***
[2026-02-27 14:57:17] 2026-02-27 13:52:32,687 | INFO     | job 7030547879 has state=finished
[2026-02-27 14:57:17] 2026-02-27 13:52:32,687 | INFO     | preparing for final server update for job 7030547879 in state='finished'
[2026-02-27 14:57:17] 2026-02-27 13:52:32,687 | INFO     | reading metadata from: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-7030547879/jobReport.json
[2026-02-27 14:57:17] 2026-02-27 13:52:32,690 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot116/slots/0/workernode_map.json
[2026-02-27 14:57:17] 2026-02-27 13:52:32,690 | INFO     | this job has now completed (state=finished)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,690 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,690 | INFO     | log transfer has been attempted: DONE
[2026-02-27 14:57:17] 2026-02-27 13:52:32,690 | INFO     | job 7030547879 has finished - writing final server update
[2026-02-27 14:57:17] 2026-02-27 13:52:32,691 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1164229/.job.ad'
[2026-02-27 14:57:17] 2026-02-27 13:52:32,691 | INFO     | total number of processed events: 400 (read)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,718 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-7030547879/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,719 | INFO     | extracted standard info from prmon json
[2026-02-27 14:57:17] 2026-02-27 13:52:32,719 | INFO     | extracted standard memory fields from prmon json
[2026-02-27 14:57:17] 2026-02-27 13:52:32,720 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-27 14:57:17] 2026-02-27 13:52:32,720 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 14:57:17] 2026-02-27 13:52:32,720 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 14:57:17] 2026-02-27 13:52:32,724 | INFO     | fitting pss+swap vs Time
[2026-02-27 14:57:17] 2026-02-27 13:52:32,724 | INFO     | sum of square deviations: 2060343747.0
[2026-02-27 14:57:17] 2026-02-27 13:52:32,725 | INFO     | sum of deviations: 17957714176.999996
[2026-02-27 14:57:17] 2026-02-27 13:52:32,725 | INFO     | mean x: 1772194594.5
[2026-02-27 14:57:17] 2026-02-27 13:52:32,725 | INFO     | mean y: 2327541.936170213
[2026-02-27 14:57:17] 2026-02-27 13:52:32,726 | INFO     | intersect: -15443912455.828342
[2026-02-27 14:57:17] 2026-02-27 13:52:32,726 | INFO     | chi2: 1.3263466461988538
[2026-02-27 14:57:17] 2026-02-27 13:52:32,726 | INFO     | sum of square deviations: 1900284932.0
[2026-02-27 14:57:17] 2026-02-27 13:52:32,727 | INFO     | sum of deviations: 17341098726.999996
[2026-02-27 14:57:17] 2026-02-27 13:52:32,727 | INFO     | mean x: 1772194442.0
[2026-02-27 14:57:17] 2026-02-27 13:52:32,728 | INFO     | mean y: 2326954.306010929
[2026-02-27 14:57:17] 2026-02-27 13:52:32,728 | INFO     | intersect: -16169878731.616182
[2026-02-27 14:57:17] 2026-02-27 13:52:32,728 | INFO     | chi2: 1.3272898062501057
[2026-02-27 14:57:17] 2026-02-27 13:52:32,728 | INFO     | current chi2=1.3272898062501057 (change=-0.07110961934083569 %)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,728 | INFO     | right removable region: 182
[2026-02-27 14:57:17] 2026-02-27 13:52:32,728 | INFO     | sum of square deviations: 1900284932.0
[2026-02-27 14:57:17] 2026-02-27 13:52:32,730 | INFO     | sum of deviations: -5320722925.999998
[2026-02-27 14:57:17] 2026-02-27 13:52:32,730 | INFO     | mean x: 1772194747.0
[2026-02-27 14:57:17] 2026-02-27 13:52:32,730 | INFO     | mean y: 2349407.0327868853
[2026-02-27 14:57:17] 2026-02-27 13:52:32,730 | INFO     | intersect: 4964424862.6201315
[2026-02-27 14:57:17] 2026-02-27 13:52:32,730 | INFO     | chi2: 0.02759009288492045
[2026-02-27 14:57:17] 2026-02-27 13:52:32,730 | INFO     | current chi2=0.02759009288492045 (change=97.91984297890825 %)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,731 | INFO     | sum of square deviations: 1748737904.5
[2026-02-27 14:57:17] 2026-02-27 13:52:32,732 | INFO     | sum of deviations: -3758840099.500001
[2026-02-27 14:57:17] 2026-02-27 13:52:32,732 | INFO     | mean x: 1772194899.5
[2026-02-27 14:57:17] 2026-02-27 13:52:32,732 | INFO     | mean y: 2347828.938202247
[2026-02-27 14:57:17] 2026-02-27 13:52:32,732 | INFO     | intersect: 3811607773.0546446
[2026-02-27 14:57:17] 2026-02-27 13:52:32,732 | INFO     | chi2: 0.025793491049416584
[2026-02-27 14:57:17] 2026-02-27 13:52:32,732 | INFO     | current chi2=0.025793491049416584 (change=6.511764360481043 %)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,732 | INFO     | left removable region: 20
[2026-02-27 14:57:17] 2026-02-27 13:52:32,733 | INFO     | sum of square deviations: 1318277740.5
[2026-02-27 14:57:17] 2026-02-27 13:52:32,733 | INFO     | sum of deviations: 1469367695.0000007
[2026-02-27 14:57:17] 2026-02-27 13:52:32,734 | INFO     | mean x: 1772195021.5
[2026-02-27 14:57:17] 2026-02-27 13:52:32,734 | INFO     | mean y: 2341569.5308641978
[2026-02-27 14:57:17] 2026-02-27 13:52:32,734 | INFO     | intersect: -1972967603.8185067
[2026-02-27 14:57:17] 2026-02-27 13:52:32,734 | INFO     | chi2: 0.007529290387677052
[2026-02-27 14:57:17] 2026-02-27 13:52:32,734 | INFO     | current memory leak: 1.11 B/s (using 162 data points, chi2=0.01)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,734 | INFO     | could have reported an average CPU frequency of 2661 MHz (10 samples)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,735 | INFO     | ..............................
[2026-02-27 14:57:17] 2026-02-27 13:52:32,735 | INFO     | . Timing measurements:
[2026-02-27 14:57:17] 2026-02-27 13:52:32,735 | INFO     | . get job = 0 s
[2026-02-27 14:57:17] 2026-02-27 13:52:32,735 | INFO     | . initial setup = 8 s
[2026-02-27 14:57:17] 2026-02-27 13:52:32,735 | INFO     | . payload setup = 9 s
[2026-02-27 14:57:17] 2026-02-27 13:52:32,735 | INFO     | . stage-in = 0 s
[2026-02-27 14:57:17] 2026-02-27 13:52:32,735 | INFO     | . payload execution = 11462 s
[2026-02-27 14:57:17] 2026-02-27 13:52:32,735 | INFO     | . stage-out = 1 s
[2026-02-27 14:57:17] 2026-02-27 13:52:32,735 | INFO     | . log creation = 0 s
[2026-02-27 14:57:17] 2026-02-27 13:52:32,735 | INFO     | ..............................
[2026-02-27 14:57:17] 2026-02-27 13:52:32,839 | INFO     | 
[2026-02-27 14:57:17] 2026-02-27 13:52:32,839 | INFO     | job summary report
[2026-02-27 14:57:17] 2026-02-27 13:52:32,839 | INFO     | --------------------------------------------------
[2026-02-27 14:57:17] 2026-02-27 13:52:32,839 | INFO     | PanDA job id: 7030547879
[2026-02-27 14:57:17] 2026-02-27 13:52:32,839 | INFO     | task id: 48838447
[2026-02-27 14:57:17] 2026-02-27 13:52:32,839 | INFO     | errors: (none)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,839 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | pilot state: finished 
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | transexitcode: 0
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | exeerrorcode: 0
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | exeerrordiag: 
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | exitcode: 0
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | exitmsg: OK
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | cpuconsumptiontime: 43527 s
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | nevents: 400
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | neventsw: 0
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | pid: 3535993
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | pgrp: 3535993
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | corecount: 4
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | event service: False
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | sizes: {0: 2281193, 1: 2282323, 12: 2282323, 11475: 2312243, 11477: 2326746, 11479: 2326884}
[2026-02-27 14:57:17] 2026-02-27 13:52:32,840 | INFO     | --------------------------------------------------
[2026-02-27 14:57:17] 2026-02-27 13:52:32,841 | INFO     | 
[2026-02-27 14:57:17] 2026-02-27 13:52:32,841 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2026-02-27 14:57:17] 2026-02-27 13:52:32,877 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,877 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,879 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,879 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,879 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 14:57:17] 2026-02-27 13:52:32,879 | INFO     | job 7030547879 has completed (purged errors)
[2026-02-27 14:57:17] 2026-02-27 13:52:32,879 | INFO     | overall cleanup function is called
[2026-02-27 14:57:17] 2026-02-27 13:52:33,888 | INFO     | --- collectZombieJob: --- 10, [3535993]
[2026-02-27 14:57:17] 2026-02-27 13:52:33,889 | INFO     | zombie collector waiting for pid 3535993
[2026-02-27 14:57:17] 2026-02-27 13:52:33,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 14:57:17] 2026-02-27 13:52:33,889 | INFO     | collected zombie processes
[2026-02-27 14:57:17] 2026-02-27 13:52:33,889 | INFO     | will attempt to kill all subprocesses of pid=3535993
[2026-02-27 14:57:17] 2026-02-27 13:52:34,705 | INFO     | process IDs to be killed: [3535993] (in reverse order)
[2026-02-27 14:57:17] 2026-02-27 13:52:35,053 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 14:57:17] 2026-02-27 13:52:35,053 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 14:57:17] 2026-02-27 13:52:35,081 | INFO     | did not find any defunct processes belonging to 3535993
[2026-02-27 14:57:17] 2026-02-27 13:52:35,122 | INFO     | did not find any defunct processes belonging to 3535993
[2026-02-27 14:57:17] 2026-02-27 13:52:35,122 | INFO     | ready for new job
[2026-02-27 14:57:17] 2026-02-27 13:52:35,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 14:57:17] 2026-02-27 13:52:35,125 | INFO     | **************************************
[2026-02-27 14:57:17] 2026-02-27 13:52:35,126 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 14:57:17] 2026-02-27 13:52:35,126 | INFO     | **************************************
[2026-02-27 14:57:17] 2026-02-27 13:52:35,126 | INFO     | 
[2026-02-27 14:57:17] 2026-02-27 13:52:35,137 | INFO     | architecture information:
[2026-02-27 14:57:17] 2026-02-27 13:52:35,138 | INFO     | executing command: cat /etc/os-release
[2026-02-27 14:57:17] 2026-02-27 13:52:35,164 | INFO     | cat /etc/os-release:
[2026-02-27 14:57:17] NAME="CentOS Linux"
[2026-02-27 14:57:17] VERSION="7 (Core)"
[2026-02-27 14:57:17] ID="centos"
[2026-02-27 14:57:17] ID_LIKE="rhel fedora"
[2026-02-27 14:57:17] VERSION_ID="7"
[2026-02-27 14:57:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 14:57:17] ANSI_COLOR="0;31"
[2026-02-27 14:57:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 14:57:17] HOME_URL="https://www.centos.org/"
[2026-02-27 14:57:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 14:57:17] 
[2026-02-27 14:57:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 14:57:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 14:57:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 14:57:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 14:57:17] 
[2026-02-27 14:57:17] 2026-02-27 13:52:35,164 | INFO     | **************************************
[2026-02-27 14:57:17] 2026-02-27 13:52:35,667 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2026-02-27 14:57:17] 2026-02-27 13:52:35,691 | INFO     | sufficient remaining disk space (3304321974272 B)
[2026-02-27 14:57:17] 2026-02-27 13:52:35,691 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 14:57:17] 2026-02-27 13:52:35,691 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 14:57:17] 2026-02-27 13:52:35,691 | INFO     | update_server=False
[2026-02-27 14:57:17] 2026-02-27 13:52:35,692 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 14:57:17] 2026-02-27 13:52:35,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 14:57:17] 2026-02-27 13:52:35,692 | INFO     | aborting loop
[2026-02-27 14:57:17] 2026-02-27 13:52:36,020 | INFO     | all payload control threads have been joined
[2026-02-27 14:57:17] 2026-02-27 13:52:36,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 14:57:17] 2026-02-27 13:52:36,322 | INFO     | all job control threads have been joined
[2026-02-27 14:57:17] 2026-02-27 13:52:36,694 | INFO     | [job] retrieve thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:36,698 | INFO     | [job] job monitor thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:36,724 | INFO     | all data control threads have been joined
[2026-02-27 14:57:17] 2026-02-27 13:52:36,917 | INFO     | [payload] validate_post thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:37,026 | INFO     | [payload] control thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:37,097 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:37,106 | INFO     | [job] validate thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:37,260 | INFO     | [payload] failed_post thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:37,328 | INFO     | [job] control thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:37,356 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 14:57:17] 2026-02-27 13:52:37,727 | INFO     | [data] control thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:37,778 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:37,849 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 14:57:17] 2026-02-27 13:52:37,911 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:38,161 | INFO     | [data] copytool_in thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:38,254 | INFO     | [data] copytool_out thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:38,854 | INFO     | [job] queue monitor thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:41,362 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:52:45,750 | INFO     | job.realtimelogging is not enabled
[2026-02-27 14:57:17] 2026-02-27 13:52:46,755 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 14:57:17] 2026-02-27 13:53:05,084 | INFO     | PID=3520599 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-27 14:57:17] 2026-02-27 13:53:05,084 | INFO     | .. there are 21 such processes running
[2026-02-27 14:57:17] 2026-02-27 13:53:05,084 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 14:57:17] 2026-02-27 13:53:05,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 14:57:17] 2026-02-27 13:53:05,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 14:57:17] 2026-02-27 13:53:20,983 | INFO     | [monitor] cgroup control has ended
[2026-02-27 14:57:17] 2026-02-27 13:53:22,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22817455499072)>', '<ExcThread(monitor, started 22817141671680)>']
[2026-02-27 14:57:17] 2026-02-27 13:53:23,175 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 14:57:17] 2026-02-27 13:53:23,178 | INFO     | [monitor] control thread has ended
[2026-02-27 14:57:17] 2026-02-27 13:53:27,767 | INFO     | all workflow threads have been joined
[2026-02-27 14:57:17] 2026-02-27 13:53:27,767 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 14:57:17] 2026-02-27 13:53:27,768 | INFO     | traces error code: 0
[2026-02-27 14:57:17] 2026-02-27 13:53:27,768 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 14:57:17] 2026-02-27 13:53:27,951 [wrapper] ==== pilot stdout END ====
[2026-02-27 14:57:17] 2026-02-27 13:53:27,956 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 14:57:17] 2026-02-27 13:53:27,960 [wrapper] pilotpid: 3520599
[2026-02-27 14:57:17] 2026-02-27 13:53:27,964 [wrapper] Pilot exit status: 0
[2026-02-27 14:57:17] 2026-02-27 13:53:27,981 [wrapper] pandaids: 7030547879
[2026-02-27 14:57:17] 2026-02-27 13:53:28,178 [wrapper] cleanup supervisor_pilot 3866110 3520600
[2026-02-27 14:57:17] 2026-02-27 13:53:28,182 [wrapper] Test setup, not cleaning
[2026-02-27 14:57:17] 2026-02-27 13:53:28,187 [wrapper] apfmon messages muted
[2026-02-27 14:57:17] 2026-02-27 13:53:28,194 [wrapper] ==== wrapper stdout END ====
[2026-02-27 14:57:17] 2026-02-27 13:53:28,198 [wrapper] ==== wrapper stderr END ====
[2026-02-27 14:57:17]  *** Error codes and diagnostics ***
[2026-02-27 14:57:17]     "exeErrorCode": 0,
[2026-02-27 14:57:17]     "exeErrorDiag": "",
[2026-02-27 14:57:17]     "pilotErrorCode": 0,
[2026-02-27 14:57:17]     "pilotErrorDiag": "",
[2026-02-27 14:57:17]  *** Listing of results directory ***
[2026-02-27 14:57:17] total 486180
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc    584627 Feb 26 08:13 pilot3.tar.gz
[2026-02-27 14:57:17] -rwx------ 1 boinc boinc     36322 Feb 26 08:16 runpilot2-wrapper.sh
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc      5111 Feb 26 08:18 queuedata.json
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc       100 Feb 27 11:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 14:57:17] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 11:40 run_atlas
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc       105 Feb 27 11:40 job.xml
[2026-02-27 14:57:17] -rw-r--r-- 2 boinc boinc 279742102 Feb 27 11:40 EVNT.48220117._000044.pool.root.1
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc      6700 Feb 27 11:40 init_data.xml
[2026-02-27 14:57:17] -rw-r--r-- 2 boinc boinc     15845 Feb 27 11:40 start_atlas.sh
[2026-02-27 14:57:17] drwxrwx--x 2 boinc boinc      4096 Feb 27 11:40 shared
[2026-02-27 14:57:17] -rw-r--r-- 2 boinc boinc    597971 Feb 27 11:40 input.tar.gz
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc         0 Feb 27 11:40 boinc_lockfile
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc      2572 Feb 27 11:40 pandaJob.out
[2026-02-27 14:57:17] -rw------- 1 boinc boinc    998481 Feb 27 11:40 agis_schedconf.cvmfs.json
[2026-02-27 14:57:17] -rw------- 1 boinc boinc       440 Feb 27 11:41 workernode_map.json
[2026-02-27 14:57:17] drwx------ 5 boinc boinc      4096 Feb 27 11:41 pilot3
[2026-02-27 14:57:17] -rw------- 1 boinc boinc 210239031 Feb 27 14:51 HITS.48838447._001045.pool.root.1
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc       528 Feb 27 14:51 boinc_task_state.xml
[2026-02-27 14:57:17] -rw------- 1 boinc boinc        95 Feb 27 14:52 pilot_heartbeat.json
[2026-02-27 14:57:17] -rw------- 1 boinc boinc      1029 Feb 27 14:52 memory_monitor_summary.json
[2026-02-27 14:57:17] -rw------- 1 boinc boinc   1516111 Feb 27 14:52 agis_ddmendpoints.agis.ALL.json
[2026-02-27 14:57:17] -rw------- 1 boinc boinc    370964 Feb 27 14:52 log.48838447._001045.job.log.tgz.1
[2026-02-27 14:57:17] -rw------- 1 boinc boinc      6350 Feb 27 14:52 heartbeat.json
[2026-02-27 14:57:17] -rw------- 1 boinc boinc      4905 Feb 27 14:53 pilotlog.txt
[2026-02-27 14:57:17] -rw------- 1 boinc boinc   1597359 Feb 27 14:53 log.48838447._001045.job.log.1
[2026-02-27 14:57:17] -rw------- 1 boinc boinc       357 Feb 27 14:53 output.list
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc       620 Feb 27 14:53 runtime_log
[2026-02-27 14:57:17] -rw------- 1 boinc boinc   1986560 Feb 27 14:53 result.tar.gz
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc      9222 Feb 27 14:53 runtime_log.err
[2026-02-27 14:57:17] -rw------- 1 boinc boinc       666 Feb 27 14:53 arkNDmymkF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1T2KDmTVNP7n.diag
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc        26 Feb 27 14:57 wrapper_checkpoint.txt
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc      8192 Feb 27 14:57 boinc_mmap_file
[2026-02-27 14:57:17] -rw-r--r-- 1 boinc boinc     21118 Feb 27 14:57 stderr.txt
[2026-02-27 14:57:17] HITS file was successfully produced:
[2026-02-27 14:57:17] -rw------- 1 boinc boinc 210239031 Feb 27 14:51 shared/HITS.pool.root.1
[2026-02-27 14:57:17]  *** Contents of shared directory: ***
[2026-02-27 14:57:17] total 481048
[2026-02-27 14:57:17] -rw-r--r-- 2 boinc boinc 279742102 Feb 27 11:40 ATLAS.root_0
[2026-02-27 14:57:17] -rw-r--r-- 2 boinc boinc     15845 Feb 27 11:40 start_atlas.sh
[2026-02-27 14:57:17] -rw-r--r-- 2 boinc boinc    597971 Feb 27 11:40 input.tar.gz
[2026-02-27 14:57:17] -rw------- 1 boinc boinc 210239031 Feb 27 14:51 HITS.pool.root.1
[2026-02-27 14:57:17] -rw------- 1 boinc boinc   1986560 Feb 27 14:53 result.tar.gz
14:57:18 (3510215): run_atlas exited; CPU time 44254.333570
14:57:18 (3510215): called boinc_finish(0)

</stderr_txt>
]]>

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