Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:05:53 (1265769): wrapper (7.7.26015): starting
15:05:53 (1265769): wrapper: running run_atlas (--nthreads 4)
[2026-02-26 15:05:53] Arguments: --nthreads 4
[2026-02-26 15:05:53] Threads: 4
[2026-02-26 15:05:53] Checking for CVMFS
[2026-02-26 15:05:53] No cvmfs_config command found, will try listing directly
[2026-02-26 15:05:53] CVMFS is ok
[2026-02-26 15:05:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 15:05:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 15:05:53] Further information can be found at the LHC@home message board.
[2026-02-26 15:05:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 15:05:53] Checking for apptainer binary...
[2026-02-26 15:05:53] which: no apptainer in ((null))
[2026-02-26 15:05:53] apptainer is not installed, using version from CVMFS
[2026-02-26 15:05:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 15:05:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-26 15:05:53] apptainer works
[2026-02-26 15:05:53] Set ATHENA_PROC_NUMBER=4
[2026-02-26 15:05:53] Set ATHENA_CORE_NUMBER=4
[2026-02-26 15:05:53] Starting ATLAS job with PandaID=7030547854
[2026-02-26 15:05:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:58:51 (1435207): wrapper (7.7.26015): starting
16:58:51 (1435207): wrapper: running run_atlas (--nthreads 4)
[2026-02-26 16:58:51] Arguments: --nthreads 4
[2026-02-26 16:58:51] Threads: 4
[2026-02-26 16:58:51] This job has been restarted, cleaning up previous attempt
[2026-02-26 16:58:51] Checking for CVMFS
[2026-02-26 16:58:51] No cvmfs_config command found, will try listing directly
[2026-02-26 16:58:51] CVMFS is ok
[2026-02-26 16:58:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 16:58:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 16:58:51] Further information can be found at the LHC@home message board.
[2026-02-26 16:58:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 16:58:51] Checking for apptainer binary...
[2026-02-26 16:58:51] which: no apptainer in ((null))
[2026-02-26 16:58:51] apptainer is not installed, using version from CVMFS
[2026-02-26 16:58:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 16:58:51] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-26 16:58:51] apptainer works
[2026-02-26 16:58:51] Set ATHENA_PROC_NUMBER=4
[2026-02-26 16:58:51] Set ATHENA_CORE_NUMBER=4
[2026-02-26 16:58:51] Starting ATLAS job with PandaID=7030547854
[2026-02-26 16:58:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:41:55 (1640926): wrapper (7.7.26015): starting
18:41:55 (1640926): wrapper: running run_atlas (--nthreads 4)
[2026-02-26 18:41:55] Arguments: --nthreads 4
[2026-02-26 18:41:55] Threads: 4
[2026-02-26 18:41:55] This job has been restarted, cleaning up previous attempt
[2026-02-26 18:41:55] Checking for CVMFS
[2026-02-26 18:41:55] No cvmfs_config command found, will try listing directly
[2026-02-26 18:41:55] CVMFS is ok
[2026-02-26 18:41:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 18:41:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 18:41:55] Further information can be found at the LHC@home message board.
[2026-02-26 18:41:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 18:41:55] Checking for apptainer binary...
[2026-02-26 18:41:55] which: no apptainer in ((null))
[2026-02-26 18:41:55] apptainer is not installed, using version from CVMFS
[2026-02-26 18:41:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 18:41:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-26 18:41:55] apptainer works
[2026-02-26 18:41:55] Set ATHENA_PROC_NUMBER=4
[2026-02-26 18:41:55] Set ATHENA_CORE_NUMBER=4
[2026-02-26 18:41:55] Starting ATLAS job with PandaID=7030547854
[2026-02-26 18:41:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 21:55:29]  *** The last 200 lines of the pilot log: ***
[2026-02-26 21:55:29] 2026-02-26 20:52:53,108 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,108 | INFO     | reading metadata from: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7030547854/jobReport.json
[2026-02-26 21:55:29] 2026-02-26 20:52:53,111 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot52/slots/0/workernode_map.json
[2026-02-26 21:55:29] 2026-02-26 20:52:53,111 | INFO     | this job has now completed (state=finished)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,111 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,112 | INFO     | log transfer has been attempted: DONE
[2026-02-26 21:55:29] 2026-02-26 20:52:53,112 | INFO     | job 7030547854 has finished - writing final server update
[2026-02-26 21:55:29] 2026-02-26 20:52:53,112 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1581876/.job.ad'
[2026-02-26 21:55:29] 2026-02-26 20:52:53,112 | INFO     | total number of processed events: 400 (read)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,137 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7030547854/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,138 | INFO     | extracted standard info from prmon json
[2026-02-26 21:55:29] 2026-02-26 20:52:53,138 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 21:55:29] 2026-02-26 20:52:53,138 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 21:55:29] 2026-02-26 20:52:53,138 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 21:55:29] 2026-02-26 20:52:53,138 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 21:55:29] 2026-02-26 20:52:53,142 | INFO     | fitting pss+swap vs Time
[2026-02-26 21:55:29] 2026-02-26 20:52:53,142 | INFO     | sum of square deviations: 2027639878.0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,143 | INFO     | sum of deviations: 20002966524.000004
[2026-02-26 21:55:29] 2026-02-26 20:52:53,144 | INFO     | mean x: 1772133432.0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,144 | INFO     | mean y: 2325029.8128342247
[2026-02-26 21:55:29] 2026-02-26 20:52:53,144 | INFO     | intersect: -17480032710.81414
[2026-02-26 21:55:29] 2026-02-26 20:52:53,144 | INFO     | chi2: 1.3023689793712003
[2026-02-26 21:55:29] 2026-02-26 20:52:53,145 | INFO     | sum of square deviations: 1869302025.5
[2026-02-26 21:55:29] 2026-02-26 20:52:53,146 | INFO     | sum of deviations: 19411592995.999996
[2026-02-26 21:55:29] 2026-02-26 20:52:53,146 | INFO     | mean x: 1772133279.5
[2026-02-26 21:55:29] 2026-02-26 20:52:53,146 | INFO     | mean y: 2324460.0659340657
[2026-02-26 21:55:29] 2026-02-26 20:52:53,146 | INFO     | intersect: -18400228732.010895
[2026-02-26 21:55:29] 2026-02-26 20:52:53,146 | INFO     | chi2: 1.3032459170508912
[2026-02-26 21:55:29] 2026-02-26 20:52:53,146 | INFO     | current chi2=1.3032459170508912 (change=-0.06733404231681543 %)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,146 | INFO     | right removable region: 181
[2026-02-26 21:55:29] 2026-02-26 20:52:53,147 | INFO     | sum of square deviations: 1869302025.5
[2026-02-26 21:55:29] 2026-02-26 20:52:53,148 | INFO     | sum of deviations: -3525581254.0000005
[2026-02-26 21:55:29] 2026-02-26 20:52:53,148 | INFO     | mean x: 1772133584.5
[2026-02-26 21:55:29] 2026-02-26 20:52:53,148 | INFO     | mean y: 2347379.098901099
[2026-02-26 21:55:29] 2026-02-26 20:52:53,148 | INFO     | intersect: 3344664917.874299
[2026-02-26 21:55:29] 2026-02-26 20:52:53,148 | INFO     | chi2: 0.00635816246665652
[2026-02-26 21:55:29] 2026-02-26 20:52:53,149 | INFO     | current chi2=0.00635816246665652 (change=99.51180022195199 %)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,149 | INFO     | sum of square deviations: 1719429448.0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,150 | INFO     | sum of deviations: -3352700116.999999
[2026-02-26 21:55:29] 2026-02-26 20:52:53,150 | INFO     | mean x: 1772133737.0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,150 | INFO     | mean y: 2347197.6892655366
[2026-02-26 21:55:29] 2026-02-26 20:52:53,150 | INFO     | intersect: 3457814936.8805895
[2026-02-26 21:55:29] 2026-02-26 20:52:53,151 | INFO     | chi2: 0.006189188115100416
[2026-02-26 21:55:29] 2026-02-26 20:52:53,151 | INFO     | current chi2=0.006189188115100416 (change=2.657597260879061 %)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,151 | INFO     | left removable region: 20
[2026-02-26 21:55:29] 2026-02-26 20:52:53,151 | INFO     | sum of square deviations: 1294014960.0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,152 | INFO     | sum of deviations: -1680217672.0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,152 | INFO     | mean x: 1772133859.0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,152 | INFO     | mean y: 2345297.9565217393
[2026-02-26 21:55:29] 2026-02-26 20:52:53,152 | INFO     | intersect: 2303377912.789163
[2026-02-26 21:55:29] 2026-02-26 20:52:53,153 | INFO     | chi2: 0.00502336999154053
[2026-02-26 21:55:29] 2026-02-26 20:52:53,153 | INFO     | current memory leak: -1.30 B/s (using 161 data points, chi2=0.01)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,153 | INFO     | could have reported an average CPU frequency of 2686 MHz (10 samples)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,153 | INFO     | ..............................
[2026-02-26 21:55:29] 2026-02-26 20:52:53,153 | INFO     | . Timing measurements:
[2026-02-26 21:55:29] 2026-02-26 20:52:53,153 | INFO     | . get job = 0 s
[2026-02-26 21:55:29] 2026-02-26 20:52:53,154 | INFO     | . initial setup = 1 s
[2026-02-26 21:55:29] 2026-02-26 20:52:53,154 | INFO     | . payload setup = 8 s
[2026-02-26 21:55:29] 2026-02-26 20:52:53,154 | INFO     | . stage-in = 0 s
[2026-02-26 21:55:29] 2026-02-26 20:52:53,154 | INFO     | . payload execution = 11412 s
[2026-02-26 21:55:29] 2026-02-26 20:52:53,154 | INFO     | . stage-out = 1 s
[2026-02-26 21:55:29] 2026-02-26 20:52:53,154 | INFO     | . log creation = 0 s
[2026-02-26 21:55:29] 2026-02-26 20:52:53,154 | INFO     | ..............................
[2026-02-26 21:55:29] 2026-02-26 20:52:53,251 | INFO     | 
[2026-02-26 21:55:29] 2026-02-26 20:52:53,252 | INFO     | job summary report
[2026-02-26 21:55:29] 2026-02-26 20:52:53,252 | INFO     | --------------------------------------------------
[2026-02-26 21:55:29] 2026-02-26 20:52:53,252 | INFO     | PanDA job id: 7030547854
[2026-02-26 21:55:29] 2026-02-26 20:52:53,252 | INFO     | task id: 48838447
[2026-02-26 21:55:29] 2026-02-26 20:52:53,252 | INFO     | errors: (none)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,252 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 21:55:29] 2026-02-26 20:52:53,252 | INFO     | pilot state: finished 
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | transexitcode: 0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | exeerrorcode: 0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | exeerrordiag: 
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | exitcode: 0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | exitmsg: OK
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | cpuconsumptiontime: 43752 s
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | nevents: 400
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | neventsw: 0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | pid: 1673537
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | pgrp: 1673537
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | corecount: 4
[2026-02-26 21:55:29] 2026-02-26 20:52:53,253 | INFO     | event service: False
[2026-02-26 21:55:29] 2026-02-26 20:52:53,254 | INFO     | sizes: {0: 2281861, 1: 2282322, 11: 2282322, 11425: 2312269, 11426: 2321289, 11427: 2321345, 11431: 2321667}
[2026-02-26 21:55:29] 2026-02-26 20:52:53,254 | INFO     | --------------------------------------------------
[2026-02-26 21:55:29] 2026-02-26 20:52:53,254 | INFO     | 
[2026-02-26 21:55:29] 2026-02-26 20:52:53,254 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-02-26 21:55:29] 2026-02-26 20:52:53,284 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,284 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,284 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,285 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,285 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,285 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,285 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,285 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,285 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,285 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,285 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,285 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,285 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,286 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,286 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,286 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,286 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,286 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,286 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,286 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 21:55:29] 2026-02-26 20:52:53,286 | INFO     | job 7030547854 has completed (purged errors)
[2026-02-26 21:55:29] 2026-02-26 20:52:53,286 | INFO     | overall cleanup function is called
[2026-02-26 21:55:29] 2026-02-26 20:52:54,295 | INFO     | --- collectZombieJob: --- 10, [1673537]
[2026-02-26 21:55:29] 2026-02-26 20:52:54,296 | INFO     | zombie collector waiting for pid 1673537
[2026-02-26 21:55:29] 2026-02-26 20:52:54,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 21:55:29] 2026-02-26 20:52:54,296 | INFO     | collected zombie processes
[2026-02-26 21:55:29] 2026-02-26 20:52:54,296 | INFO     | will attempt to kill all subprocesses of pid=1673537
[2026-02-26 21:55:29] 2026-02-26 20:52:55,063 | INFO     | process IDs to be killed: [1673537] (in reverse order)
[2026-02-26 21:55:29] 2026-02-26 20:52:55,361 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 21:55:29] 2026-02-26 20:52:55,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 21:55:29] 2026-02-26 20:52:55,388 | INFO     | did not find any defunct processes belonging to 1673537
[2026-02-26 21:55:29] 2026-02-26 20:52:55,413 | INFO     | did not find any defunct processes belonging to 1673537
[2026-02-26 21:55:29] 2026-02-26 20:52:55,413 | INFO     | ready for new job
[2026-02-26 21:55:29] 2026-02-26 20:52:55,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 21:55:29] 2026-02-26 20:52:55,415 | INFO     | **************************************
[2026-02-26 21:55:29] 2026-02-26 20:52:55,416 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 21:55:29] 2026-02-26 20:52:55,416 | INFO     | **************************************
[2026-02-26 21:55:29] 2026-02-26 20:52:55,416 | INFO     | 
[2026-02-26 21:55:29] 2026-02-26 20:52:55,424 | INFO     | architecture information:
[2026-02-26 21:55:29] 2026-02-26 20:52:55,425 | INFO     | executing command: cat /etc/os-release
[2026-02-26 21:55:29] 2026-02-26 20:52:55,448 | INFO     | cat /etc/os-release:
[2026-02-26 21:55:29] NAME="CentOS Linux"
[2026-02-26 21:55:29] VERSION="7 (Core)"
[2026-02-26 21:55:29] ID="centos"
[2026-02-26 21:55:29] ID_LIKE="rhel fedora"
[2026-02-26 21:55:29] VERSION_ID="7"
[2026-02-26 21:55:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 21:55:29] ANSI_COLOR="0;31"
[2026-02-26 21:55:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 21:55:29] HOME_URL="https://www.centos.org/"
[2026-02-26 21:55:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 21:55:29] 
[2026-02-26 21:55:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 21:55:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 21:55:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 21:55:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 21:55:29] 
[2026-02-26 21:55:29] 2026-02-26 20:52:55,448 | INFO     | **************************************
[2026-02-26 21:55:29] 2026-02-26 20:52:55,951 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-02-26 21:55:29] 2026-02-26 20:52:55,972 | INFO     | sufficient remaining disk space (3317816098816 B)
[2026-02-26 21:55:29] 2026-02-26 20:52:55,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 21:55:29] 2026-02-26 20:52:55,973 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 21:55:29] 2026-02-26 20:52:55,973 | INFO     | update_server=False
[2026-02-26 21:55:29] 2026-02-26 20:52:55,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 21:55:29] 2026-02-26 20:52:55,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 21:55:29] 2026-02-26 20:52:56,465 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-26 21:55:29] 2026-02-26 20:52:56,466 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-26 21:55:29] 2026-02-26 20:52:56,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 21:55:29] 2026-02-26 20:52:56,466 | INFO     | will abort loop
[2026-02-26 21:55:29] 2026-02-26 20:52:56,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 21:55:29] 2026-02-26 20:52:56,911 | INFO     | all data control threads have been joined
[2026-02-26 21:55:29] 2026-02-26 20:52:56,974 | INFO     | [job] retrieve thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:57,042 | INFO     | [job] validate thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:57,092 | INFO     | all payload control threads have been joined
[2026-02-26 21:55:29] 2026-02-26 20:52:57,352 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:57,392 | INFO     | all job control threads have been joined
[2026-02-26 21:55:29] 2026-02-26 20:52:57,436 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:57,472 | INFO     | [job] job monitor thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:57,734 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:57,916 | INFO     | [data] control thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:58,047 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:58,097 | INFO     | [payload] control thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:58,146 | INFO     | [payload] validate_post thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:58,253 | INFO     | [data] copytool_in thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:58,262 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 21:55:29] 2026-02-26 20:52:58,397 | INFO     | [job] control thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:58,410 | INFO     | [payload] failed_post thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:58,691 | INFO     | [data] copytool_out thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:59,267 | INFO     | [job] queue monitor thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:52:59,976 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 21:55:29] 2026-02-26 20:53:26,017 | INFO     | PID=1648561 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-26 21:55:29] 2026-02-26 20:53:26,017 | INFO     | .. there are 21 such processes running
[2026-02-26 21:55:29] 2026-02-26 20:53:26,017 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 21:55:29] 2026-02-26 20:53:26,017 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 21:55:29] 2026-02-26 20:53:26,017 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 21:55:29] 2026-02-26 20:53:29,594 | INFO     | [monitor] cgroup control has ended
[2026-02-26 21:55:29] 2026-02-26 20:53:29,643 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22369487226688)>', '<ExcThread(monitor, started 22369245861632)>']
[2026-02-26 21:55:29] 2026-02-26 20:53:30,040 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 21:55:29] 2026-02-26 20:53:30,041 | INFO     | [monitor] control thread has ended
[2026-02-26 21:55:29] 2026-02-26 20:53:34,668 | INFO     | all workflow threads have been joined
[2026-02-26 21:55:29] 2026-02-26 20:53:34,669 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 21:55:29] 2026-02-26 20:53:34,669 | INFO     | traces error code: 0
[2026-02-26 21:55:29] 2026-02-26 20:53:34,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 21:55:29] 2026-02-26 20:53:34,800 [wrapper] ==== pilot stdout END ====
[2026-02-26 21:55:29] 2026-02-26 20:53:34,807 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 21:55:29] 2026-02-26 20:53:34,811 [wrapper] pilotpid: 1648561
[2026-02-26 21:55:29] 2026-02-26 20:53:34,814 [wrapper] Pilot exit status: 0
[2026-02-26 21:55:29] 2026-02-26 20:53:34,829 [wrapper] pandaids: 7030547854 7030547854 7030547854
[2026-02-26 21:55:29] 2026-02-26 20:53:35,005 [wrapper] cleanup supervisor_pilot 2022571 1648562
[2026-02-26 21:55:29] 2026-02-26 20:53:35,010 [wrapper] Test setup, not cleaning
[2026-02-26 21:55:29] 2026-02-26 20:53:35,014 [wrapper] apfmon messages muted
[2026-02-26 21:55:29] 2026-02-26 20:53:35,018 [wrapper] ==== wrapper stdout END ====
[2026-02-26 21:55:29] 2026-02-26 20:53:35,021 [wrapper] ==== wrapper stderr END ====
[2026-02-26 21:55:29]  *** Error codes and diagnostics ***
[2026-02-26 21:55:29]     "exeErrorCode": 0,
[2026-02-26 21:55:29]     "exeErrorDiag": "",
[2026-02-26 21:55:29]     "pilotErrorCode": 0,
[2026-02-26 21:55:29]     "pilotErrorDiag": "",
[2026-02-26 21:55:29]  *** Listing of results directory ***
[2026-02-26 21:55:29] total 764664
[2026-02-26 21:55:29] drwx------ 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc    584627 Feb 26 08:13 pilot3.tar.gz
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc      5111 Feb 26 08:13 queuedata.json
[2026-02-26 21:55:29] -rwx------ 1 boinc boinc     36322 Feb 26 08:13 runpilot2-wrapper.sh
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc       100 Feb 26 14:08 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 21:55:29] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 14:08 run_atlas
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc       105 Feb 26 14:08 job.xml
[2026-02-26 21:55:29] -rw-r--r-- 3 boinc boinc 280331796 Feb 26 15:05 EVNT.48220117._000043.pool.root.1
[2026-02-26 21:55:29] -rw-r--r-- 3 boinc boinc 280331796 Feb 26 15:05 ATLAS.root_0
[2026-02-26 21:55:29] -rw-r--r-- 2 boinc boinc     15845 Feb 26 15:05 start_atlas.sh
[2026-02-26 21:55:29] drwxrwx--x 2 boinc boinc      4096 Feb 26 15:05 shared
[2026-02-26 21:55:29] -rw-r--r-- 2 boinc boinc    597969 Feb 26 15:05 input.tar.gz
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc         0 Feb 26 15:05 boinc_lockfile
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc      2572 Feb 26 18:41 pandaJob.out
[2026-02-26 21:55:29] -rw------- 1 boinc boinc    998467 Feb 26 18:42 agis_schedconf.cvmfs.json
[2026-02-26 21:55:29] -rw------- 1 boinc boinc       443 Feb 26 18:42 workernode_map.json
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc      6701 Feb 26 20:06 init_data.xml
[2026-02-26 21:55:29] -rw------- 1 boinc boinc 214474211 Feb 26 21:52 HITS.48838447._001020.pool.root.1
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc       529 Feb 26 21:52 boinc_task_state.xml
[2026-02-26 21:55:29] -rw------- 1 boinc boinc      1028 Feb 26 21:52 memory_monitor_summary.json
[2026-02-26 21:55:29] -rw------- 1 boinc boinc   1513015 Feb 26 21:52 agis_ddmendpoints.agis.ALL.json
[2026-02-26 21:55:29] -rw------- 1 boinc boinc    370320 Feb 26 21:52 log.48838447._001020.job.log.tgz.1
[2026-02-26 21:55:29] -rw------- 1 boinc boinc        97 Feb 26 21:52 pilot_heartbeat.json
[2026-02-26 21:55:29] -rw------- 1 boinc boinc      6348 Feb 26 21:52 heartbeat.json
[2026-02-26 21:55:29] -rw------- 1 boinc boinc      5017 Feb 26 21:53 pilotlog.txt
[2026-02-26 21:55:29] -rw------- 1 boinc boinc   1599967 Feb 26 21:53 log.48838447._001020.job.log.1
[2026-02-26 21:55:29] -rw------- 1 boinc boinc       357 Feb 26 21:53 output.list
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc       620 Feb 26 21:53 runtime_log
[2026-02-26 21:55:29] -rw------- 1 boinc boinc   1986560 Feb 26 21:53 result.tar.gz
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc      9282 Feb 26 21:53 runtime_log.err
[2026-02-26 21:55:29] -rw------- 1 boinc boinc       915 Feb 26 21:53 8kdLDm1jkF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYb0KDm0hPhHm.diag
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc        27 Feb 26 21:55 wrapper_checkpoint.txt
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc      8192 Feb 26 21:55 boinc_mmap_file
[2026-02-26 21:55:29] -rw-r--r-- 1 boinc boinc     24985 Feb 26 21:55 stderr.txt
[2026-02-26 21:55:29] HITS file was successfully produced:
[2026-02-26 21:55:29] -rw------- 1 boinc boinc 214474211 Feb 26 21:52 shared/HITS.pool.root.1
[2026-02-26 21:55:29]  *** Contents of shared directory: ***
[2026-02-26 21:55:29] total 485760
[2026-02-26 21:55:29] -rw-r--r-- 3 boinc boinc 280331796 Feb 26 15:05 ATLAS.root_0
[2026-02-26 21:55:29] -rw-r--r-- 2 boinc boinc     15845 Feb 26 15:05 start_atlas.sh
[2026-02-26 21:55:29] -rw-r--r-- 2 boinc boinc    597969 Feb 26 15:05 input.tar.gz
[2026-02-26 21:55:29] -rw------- 1 boinc boinc 214474211 Feb 26 21:52 HITS.pool.root.1
[2026-02-26 21:55:29] -rw------- 1 boinc boinc   1986560 Feb 26 21:53 result.tar.gz
21:55:31 (1640926): run_atlas exited; CPU time 44486.174761
21:55:31 (1640926): called boinc_finish(0)

</stderr_txt>
]]>

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