Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:57:39 (92985): wrapper (7.7.26015): starting
16:57:39 (92985): wrapper: running run_atlas (--nthreads 4)
[2026-02-26 16:57:39] Arguments: --nthreads 4
[2026-02-26 16:57:39] Threads: 4
[2026-02-26 16:57:39] Checking for CVMFS
[2026-02-26 16:57:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 16:57:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 16:57:39] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 16:57:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 16:57:40] 2.13.1.0 4920 260 52888 156659 0 50 9072302 10240000 1822 130560 0 225681 99.991 7225 3515 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-26 16:57:40] CVMFS is ok
[2026-02-26 16:57:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 16:57:40] Checking for apptainer binary...
[2026-02-26 16:57:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 16:57:40] Running /usr/bin/apptainer --version
[2026-02-26 16:57:40] apptainer version 1.4.5
[2026-02-26 16:57:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 16:57:40] woolyvlneu
[2026-02-26 16:57:40] apptainer works
[2026-02-26 16:57:40] Set ATHENA_PROC_NUMBER=4
[2026-02-26 16:57:40] Set ATHENA_CORE_NUMBER=4
[2026-02-26 16:57:40] Starting ATLAS job with PandaID=7030499433
[2026-02-26 16:57:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 18:27:07]  *** The last 200 lines of the pilot log: ***
[2026-02-26 18:27:07]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-26 18:27:07]  is_altstaged=None
[2026-02-26 18:27:07]  is_tar=False
[2026-02-26 18:27:07]  lfn=log.48838605._001155.job.log.tgz.1
[2026-02-26 18:27:07]  mtime=0
[2026-02-26 18:27:07]  protocol_id=None
[2026-02-26 18:27:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-26 18:27:07]  replicas=None
[2026-02-26 18:27:07]  scope=mc23_13p6TeV
[2026-02-26 18:27:07]  status=None
[2026-02-26 18:27:07]  status_code=0
[2026-02-26 18:27:07]  storage_token=
[2026-02-26 18:27:07]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7030499433/log.48838605._001155.job.log.tgz.1
[2026-02-26 18:27:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/e8/log.48838605._001155.job.log.tgz.1
[2026-02-26 18:27:07]  workdir=None
[2026-02-26 18:27:07] ]
[2026-02-26 18:27:07] 2026-02-26 17:26:34,151 | INFO     | transferring file log.48838605._001155.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7030499433/log.48838605._001155.job.log.tgz.1 to /var/li
[2026-02-26 18:27:07] 2026-02-26 17:26:34,152 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7030499433/log.48838605._001155.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-26 18:27:07] 2026-02-26 17:26:34,170 | INFO     | adding to output.list: log.48838605._001155.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c3/e8/log.48838605._001155.job.log.tg
[2026-02-26 18:27:07] 2026-02-26 17:26:34,170 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-26 18:27:07] 2026-02-26 17:26:34,170 | INFO     | summary of transferred files:
[2026-02-26 18:27:07] 2026-02-26 17:26:34,170 | INFO     |  -- lfn=log.48838605._001155.job.log.tgz.1, status_code=0, status=transferred
[2026-02-26 18:27:07] 2026-02-26 17:26:34,170 | INFO     | stage-out finished correctly
[2026-02-26 18:27:07] 2026-02-26 17:26:35,561 | INFO     | time since job start (5321s) is within the limit (349056.0s)
[2026-02-26 18:27:07] 2026-02-26 17:26:35,881 | WARNING  | process 101647 can no longer be monitored (due to stat problems) - aborting
[2026-02-26 18:27:07] 2026-02-26 17:26:35,882 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7030499433/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 18:27:07] 2026-02-26 17:26:35,978 | INFO     | number of running child processes to parent process 101647: 1
[2026-02-26 18:27:07] 2026-02-26 17:26:35,978 | INFO     | maximum number of monitored processes: 6
[2026-02-26 18:27:07] 2026-02-26 17:26:36,380 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-26 18:27:07] 2026-02-26 17:26:37,186 | INFO     | job 7030499433 has state=finished
[2026-02-26 18:27:07] 2026-02-26 17:26:37,186 | INFO     | preparing for final server update for job 7030499433 in state='finished'
[2026-02-26 18:27:07] 2026-02-26 17:26:37,187 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7030499433/jobReport.json
[2026-02-26 18:27:07] 2026-02-26 17:26:37,188 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/1/workernode_map.json
[2026-02-26 18:27:07] 2026-02-26 17:26:37,188 | INFO     | this job has now completed (state=finished)
[2026-02-26 18:27:07] 2026-02-26 17:26:37,188 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-26 18:27:07] 2026-02-26 17:26:37,188 | INFO     | log transfer has been attempted: DONE
[2026-02-26 18:27:07] 2026-02-26 17:26:37,188 | INFO     | job 7030499433 has finished - writing final server update
[2026-02-26 18:27:07] 2026-02-26 17:26:37,188 | INFO     | total number of processed events: 400 (read)
[2026-02-26 18:27:07] 2026-02-26 17:26:37,190 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7030499433/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 18:27:07] 2026-02-26 17:26:37,190 | INFO     | extracted standard info from prmon json
[2026-02-26 18:27:07] 2026-02-26 17:26:37,190 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 18:27:07] 2026-02-26 17:26:37,190 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 18:27:07] 2026-02-26 17:26:37,190 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 18:27:07] 2026-02-26 17:26:37,190 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 18:27:07] 2026-02-26 17:26:37,191 | INFO     | fitting pss+swap vs Time
[2026-02-26 18:27:07] 2026-02-26 17:26:37,191 | INFO     | sum of square deviations: 158737860.0
[2026-02-26 18:27:07] 2026-02-26 17:26:37,191 | INFO     | sum of deviations: -8766239087.499998
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | mean x: 1772124209.5
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | mean y: 2401040.5125
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | intersect: 97867299264.69125
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | chi2: 0.15448561792161747
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | current memory leak: -55.22 B/s (using 80 data points, chi2=0.15)
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | could have reported an average CPU frequency of 3700 MHz (6 samples)
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | ..............................
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | . Timing measurements:
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | . get job = 0 s
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | . initial setup = 5 s
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | . payload setup = 5 s
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | . stage-in = 0 s
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | . payload execution = 5299 s
[2026-02-26 18:27:07] 2026-02-26 17:26:37,192 | INFO     | . stage-out = 0 s
[2026-02-26 18:27:07] 2026-02-26 17:26:37,193 | INFO     | . log creation = 0 s
[2026-02-26 18:27:07] 2026-02-26 17:26:37,193 | INFO     | ..............................
[2026-02-26 18:27:07] 2026-02-26 17:26:37,568 | INFO     | time since job start (5323s) is within the limit (349056.0s)
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | 
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | job summary report
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | --------------------------------------------------
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | PanDA job id: 7030499433
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | task id: 48838605
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | errors: (none)
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | pilot state: finished 
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | transexitcode: 0
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | exeerrorcode: 0
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | exeerrordiag: 
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | exitcode: 0
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | exitmsg: OK
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | cpuconsumptiontime: 20184 s
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | nevents: 400
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | neventsw: 0
[2026-02-26 18:27:07] 2026-02-26 17:26:37,653 | INFO     | pid: 101647
[2026-02-26 18:27:07] 2026-02-26 17:26:37,654 | INFO     | pgrp: 101647
[2026-02-26 18:27:07] 2026-02-26 17:26:37,654 | INFO     | corecount: 4
[2026-02-26 18:27:07] 2026-02-26 17:26:37,654 | INFO     | event service: False
[2026-02-26 18:27:07] 2026-02-26 17:26:37,654 | INFO     | sizes: {0: 2282239, 11: 2282239, 5308: 2317882, 5311: 2318076}
[2026-02-26 18:27:07] 2026-02-26 17:26:37,654 | INFO     | --------------------------------------------------
[2026-02-26 18:27:07] 2026-02-26 17:26:37,654 | INFO     | 
[2026-02-26 18:27:07] 2026-02-26 17:26:37,654 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2026-02-26 18:27:07] 2026-02-26 17:26:37,670 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 18:27:07] 2026-02-26 17:26:37,671 | INFO     | job 7030499433 has completed (purged errors)
[2026-02-26 18:27:07] 2026-02-26 17:26:37,672 | INFO     | overall cleanup function is called
[2026-02-26 18:27:07] 2026-02-26 17:26:38,679 | INFO     | --- collectZombieJob: --- 10, [101647]
[2026-02-26 18:27:07] 2026-02-26 17:26:38,679 | INFO     | zombie collector waiting for pid 101647
[2026-02-26 18:27:07] 2026-02-26 17:26:38,679 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 18:27:07] 2026-02-26 17:26:38,679 | INFO     | collected zombie processes
[2026-02-26 18:27:07] 2026-02-26 17:26:38,679 | INFO     | will attempt to kill all subprocesses of pid=101647
[2026-02-26 18:27:07] 2026-02-26 17:26:38,772 | INFO     | process IDs to be killed: [101647] (in reverse order)
[2026-02-26 18:27:07] 2026-02-26 17:26:38,819 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 18:27:07] 2026-02-26 17:26:38,819 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 18:27:07] 2026-02-26 17:26:38,822 | INFO     | did not find any defunct processes belonging to 101647
[2026-02-26 18:27:07] 2026-02-26 17:26:38,824 | INFO     | did not find any defunct processes belonging to 101647
[2026-02-26 18:27:07] 2026-02-26 17:26:38,824 | INFO     | ready for new job
[2026-02-26 18:27:07] 2026-02-26 17:26:38,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 18:27:07] 2026-02-26 17:26:38,825 | INFO     | **************************************
[2026-02-26 18:27:07] 2026-02-26 17:26:38,825 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 18:27:07] 2026-02-26 17:26:38,825 | INFO     | **************************************
[2026-02-26 18:27:07] 2026-02-26 17:26:38,825 | INFO     | 
[2026-02-26 18:27:07] 2026-02-26 17:26:38,826 | INFO     | pilot is running in a VM
[2026-02-26 18:27:07] 2026-02-26 17:26:38,826 | INFO     | architecture information:
[2026-02-26 18:27:07] 2026-02-26 17:26:38,826 | INFO     | executing command: cat /etc/os-release
[2026-02-26 18:27:07] 2026-02-26 17:26:38,839 | INFO     | cat /etc/os-release:
[2026-02-26 18:27:07] NAME="CentOS Linux"
[2026-02-26 18:27:07] VERSION="7 (Core)"
[2026-02-26 18:27:07] ID="centos"
[2026-02-26 18:27:07] ID_LIKE="rhel fedora"
[2026-02-26 18:27:07] VERSION_ID="7"
[2026-02-26 18:27:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 18:27:07] ANSI_COLOR="0;31"
[2026-02-26 18:27:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 18:27:07] HOME_URL="https://www.centos.org/"
[2026-02-26 18:27:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 18:27:07] 
[2026-02-26 18:27:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 18:27:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 18:27:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 18:27:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 18:27:07] 
[2026-02-26 18:27:07] 2026-02-26 17:26:38,839 | INFO     | **************************************
[2026-02-26 18:27:07] 2026-02-26 17:26:39,342 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2026-02-26 18:27:07] 2026-02-26 17:26:39,354 | INFO     | sufficient remaining disk space (43860885504 B)
[2026-02-26 18:27:07] 2026-02-26 17:26:39,354 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 18:27:07] 2026-02-26 17:26:39,354 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 18:27:07] 2026-02-26 17:26:39,354 | INFO     | update_server=False
[2026-02-26 18:27:07] 2026-02-26 17:26:39,354 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 18:27:07] 2026-02-26 17:26:39,354 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-26 18:27:07] 2026-02-26 17:26:39,354 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 18:27:07] 2026-02-26 17:26:39,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 18:27:07] 2026-02-26 17:26:39,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 18:27:07] 2026-02-26 17:26:39,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 18:27:07] 2026-02-26 17:26:39,487 | INFO     | aborting loop
[2026-02-26 18:27:07] 2026-02-26 17:26:39,670 | INFO     | all data control threads have been joined
[2026-02-26 18:27:07] 2026-02-26 17:26:39,718 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 18:27:07] 2026-02-26 17:26:39,976 | INFO     | job.realtimelogging is not enabled
[2026-02-26 18:27:07] 2026-02-26 17:26:40,360 | INFO     | [job] retrieve thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:40,487 | INFO     | all payload control threads have been joined
[2026-02-26 18:27:07] 2026-02-26 17:26:40,492 | INFO     | [job] job monitor thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:40,524 | INFO     | [payload] failed_post thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:40,676 | INFO     | [data] control thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:40,791 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:40,803 | INFO     | all job control threads have been joined
[2026-02-26 18:27:07] 2026-02-26 17:26:40,981 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:41,225 | INFO     | [payload] validate_post thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:41,492 | INFO     | [payload] control thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:41,597 | INFO     | [job] validate thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:41,654 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:41,689 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:41,724 | INFO     | [data] copytool_out thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:41,809 | INFO     | [job] control thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:41,823 | INFO     | [data] copytool_in thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:42,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 18:27:07] 2026-02-26 17:26:42,423 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 18:27:07] 2026-02-26 17:26:43,242 | INFO     | [job] queue monitor thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:26:46,430 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 18:27:07] 2026-02-26 17:27:00,070 | INFO     | [monitor] cgroup control has ended
[2026-02-26 18:27:07] 2026-02-26 17:27:01,961 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129813174646592)>', '<ExcThread(monitor, started 129812005897984)>']
[2026-02-26 18:27:07] 2026-02-26 17:27:02,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 18:27:07] 2026-02-26 17:27:02,474 | INFO     | [monitor] control thread has ended
[2026-02-26 18:27:07] 2026-02-26 17:27:06,986 | INFO     | all workflow threads have been joined
[2026-02-26 18:27:07] 2026-02-26 17:27:06,986 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 18:27:07] 2026-02-26 17:27:06,987 | INFO     | traces error code: 0
[2026-02-26 18:27:07] 2026-02-26 17:27:06,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 18:27:07] 2026-02-26 17:27:07,056 [wrapper] ==== pilot stdout END ====
[2026-02-26 18:27:07] 2026-02-26 17:27:07,059 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 18:27:07] 2026-02-26 17:27:07,062 [wrapper] pilotpid: 97080
[2026-02-26 18:27:07] 2026-02-26 17:27:07,066 [wrapper] Pilot exit status: 0
[2026-02-26 18:27:07] 2026-02-26 17:27:07,080 [wrapper] pandaids: 7030499433
[2026-02-26 18:27:07] 2026-02-26 17:27:07,113 [wrapper] cleanup supervisor_pilot  138430 97081
[2026-02-26 18:27:07] 2026-02-26 17:27:07,116 [wrapper] Test setup, not cleaning
[2026-02-26 18:27:07] 2026-02-26 17:27:07,119 [wrapper] apfmon messages muted
[2026-02-26 18:27:07] 2026-02-26 17:27:07,123 [wrapper] ==== wrapper stdout END ====
[2026-02-26 18:27:07] 2026-02-26 17:27:07,126 [wrapper] ==== wrapper stderr END ====
[2026-02-26 18:27:07]  *** Error codes and diagnostics ***
[2026-02-26 18:27:07]     "exeErrorCode": 0,
[2026-02-26 18:27:07]     "exeErrorDiag": "",
[2026-02-26 18:27:07]     "pilotErrorCode": 0,
[2026-02-26 18:27:07]     "pilotErrorDiag": "",
[2026-02-26 18:27:07]  *** Listing of results directory ***
[2026-02-26 18:27:07] insgesamt 489832
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc    584627 Feb 26 05:42 pilot3.tar.gz
[2026-02-26 18:27:07] -rwx------ 1 yeti boinc     36322 Feb 26 05:46 runpilot2-wrapper.sh
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc      5111 Feb 26 05:48 queuedata.json
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc       100 Feb 26 16:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 18:27:07] -rwxr-xr-x 1 yeti boinc      7986 Feb 26 16:57 run_atlas
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc       105 Feb 26 16:57 job.xml
[2026-02-26 18:27:07] -rw-r--r-- 2 yeti boinc 280171076 Feb 26 16:57 EVNT.48343768._000047.pool.root.1
[2026-02-26 18:27:07] drwxrwx--x 2 yeti boinc      4096 Feb 26 16:57 shared
[2026-02-26 18:27:07] -rw-r--r-- 2 yeti boinc    597963 Feb 26 16:57 input.tar.gz
[2026-02-26 18:27:07] -rw-r--r-- 2 yeti boinc     15845 Feb 26 16:57 start_atlas.sh
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc      6562 Feb 26 16:57 init_data.xml
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc         0 Feb 26 16:57 boinc_setup_complete
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc         0 Feb 26 16:57 boinc_lockfile
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc      2564 Feb 26 16:57 pandaJob.out
[2026-02-26 18:27:07] -rw------- 1 yeti boinc        52 Feb 26 16:57 setup.sh.local
[2026-02-26 18:27:07] -rw------- 1 yeti boinc    998423 Feb 26 16:57 agis_schedconf.cvmfs.json
[2026-02-26 18:27:07] -rw------- 1 yeti boinc   1513015 Feb 26 16:57 agis_ddmendpoints.agis.ALL.json
[2026-02-26 18:27:07] -rw------- 1 yeti boinc       423 Feb 26 16:57 workernode_map.json
[2026-02-26 18:27:07] drwx------ 5 yeti boinc      4096 Feb 26 16:57 pilot3
[2026-02-26 18:27:07] -rw------- 1 yeti boinc 215365355 Feb 26 18:26 HITS.48838605._001155.pool.root.1
[2026-02-26 18:27:07] -rw------- 1 yeti boinc      1016 Feb 26 18:26 memory_monitor_summary.json
[2026-02-26 18:27:07] -rw------- 1 yeti boinc    265287 Feb 26 18:26 log.48838605._001155.job.log.tgz.1
[2026-02-26 18:27:07] -rw------- 1 yeti boinc        95 Feb 26 18:26 pilot_heartbeat.json
[2026-02-26 18:27:07] -rw------- 1 yeti boinc      6275 Feb 26 18:26 heartbeat.json
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc       529 Feb 26 18:26 boinc_task_state.xml
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc        27 Feb 26 18:26 wrapper_checkpoint.txt
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc      8192 Feb 26 18:26 boinc_mmap_file
[2026-02-26 18:27:07] -rw------- 1 yeti boinc      4696 Feb 26 18:27 pilotlog.txt
[2026-02-26 18:27:07] -rw------- 1 yeti boinc    794142 Feb 26 18:27 log.48838605._001155.job.log.1
[2026-02-26 18:27:07] -rw------- 1 yeti boinc       357 Feb 26 18:27 output.list
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc       620 Feb 26 18:27 runtime_log
[2026-02-26 18:27:07] -rw------- 1 yeti boinc   1075200 Feb 26 18:27 result.tar.gz
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc      9551 Feb 26 18:27 runtime_log.err
[2026-02-26 18:27:07] -rw------- 1 yeti boinc       639 Feb 26 18:27 1IQNDm9RiF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmfU0KDm2Laeyn.diag
[2026-02-26 18:27:07] -rw-r--r-- 1 yeti boinc     21070 Feb 26 18:27 stderr.txt
[2026-02-26 18:27:07] HITS file was successfully produced:
[2026-02-26 18:27:07] -rw------- 1 yeti boinc 215365355 Feb 26 18:26 shared/HITS.pool.root.1
[2026-02-26 18:27:07]  *** Contents of shared directory: ***
[2026-02-26 18:27:07] insgesamt 485588
[2026-02-26 18:27:07] -rw-r--r-- 2 yeti boinc 280171076 Feb 26 16:57 ATLAS.root_0
[2026-02-26 18:27:07] -rw-r--r-- 2 yeti boinc    597963 Feb 26 16:57 input.tar.gz
[2026-02-26 18:27:07] -rw-r--r-- 2 yeti boinc     15845 Feb 26 16:57 start_atlas.sh
[2026-02-26 18:27:07] -rw------- 1 yeti boinc 215365355 Feb 26 18:26 HITS.pool.root.1
[2026-02-26 18:27:07] -rw------- 1 yeti boinc   1075200 Feb 26 18:27 result.tar.gz
18:27:08 (92985): run_atlas exited; CPU time 20242.666023
18:27:08 (92985): called boinc_finish(0)

</stderr_txt>
]]>

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