Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:35:01 (2337441): wrapper (7.7.26015): starting
05:35:01 (2337441): wrapper: running run_atlas (--nthreads 10)
[2026-02-26 05:35:01] Arguments: --nthreads 10
[2026-02-26 05:35:01] Threads: 10
[2026-02-26 05:35:01] Checking for CVMFS
[2026-02-26 05:35:01] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 05:35:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 05:35:02] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 05:35:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 05:35:03] 2.13.3.0 14328 162394 245696 156651 3 374 40386038 40960000 60778 16776704 0 1602095952 99.722 1187084331 48851 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-26 05:35:03] CVMFS is ok
[2026-02-26 05:35:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 05:35:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 05:35:03] Further information can be found at the LHC@home message board.
[2026-02-26 05:35:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 05:35:03] Checking for apptainer binary...
[2026-02-26 05:35:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 05:35:03] Running /usr/bin/apptainer --version
[2026-02-26 05:35:03] apptainer version 1.4.5-2.el9
[2026-02-26 05:35:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 05:35:03] c8-16-2.aglt2.org
[2026-02-26 05:35:03] apptainer works
[2026-02-26 05:35:03] Set ATHENA_PROC_NUMBER=10
[2026-02-26 05:35:03] Set ATHENA_CORE_NUMBER=10
[2026-02-26 05:35:03] Starting ATLAS job with PandaID=7030430156
[2026-02-26 05:35:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 08:19:27]  *** The last 200 lines of the pilot log: ***
[2026-02-26 08:19:27] 2026-02-26 13:18:50,097 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-7030430156/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 08:19:27] 2026-02-26 13:18:50,098 | INFO     | extracted standard info from prmon json
[2026-02-26 08:19:27] 2026-02-26 13:18:50,098 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 08:19:27] 2026-02-26 13:18:50,098 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 08:19:27] 2026-02-26 13:18:50,121 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 08:19:27] 2026-02-26 13:18:50,121 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 08:19:27] 2026-02-26 13:18:50,123 | INFO     | fitting pss+swap vs Time
[2026-02-26 08:19:27] 2026-02-26 13:18:50,123 | INFO     | sum of square deviations: 1223021241.443035
[2026-02-26 08:19:27] 2026-02-26 13:18:50,124 | INFO     | sum of deviations: 45458342683.29116
[2026-02-26 08:19:27] 2026-02-26 13:18:50,124 | INFO     | mean x: 1772107078.5189874
[2026-02-26 08:19:27] 2026-02-26 13:18:50,124 | INFO     | mean y: 2519396.069620253
[2026-02-26 08:19:27] 2026-02-26 13:18:50,124 | INFO     | intersect: -65864734676.92861
[2026-02-26 08:19:27] 2026-02-26 13:18:50,124 | INFO     | chi2: 4.197896465382692
[2026-02-26 08:19:27] 2026-02-26 13:18:50,124 | INFO     | sum of square deviations: 1110545628.9411745
[2026-02-26 08:19:27] 2026-02-26 13:18:50,125 | INFO     | sum of deviations: 54870800598.92155
[2026-02-26 08:19:27] 2026-02-26 13:18:50,125 | INFO     | mean x: 1772106926.0196078
[2026-02-26 08:19:27] 2026-02-26 13:18:50,125 | INFO     | mean y: 2531773.359477124
[2026-02-26 08:19:27] 2026-02-26 13:18:50,125 | INFO     | intersect: -87555262560.85274
[2026-02-26 08:19:27] 2026-02-26 13:18:50,125 | INFO     | chi2: 3.422738463561152
[2026-02-26 08:19:27] 2026-02-26 13:18:50,125 | INFO     | current chi2=3.422738463561152 (change=18.465391136102593 %)
[2026-02-26 08:19:27] 2026-02-26 13:18:50,125 | INFO     | right removable region: 152
[2026-02-26 08:19:27] 2026-02-26 13:18:50,136 | INFO     | sum of square deviations: 1110543798.9411745
[2026-02-26 08:19:27] 2026-02-26 13:18:50,137 | INFO     | sum of deviations: -115814506.76470375
[2026-02-26 08:19:27] 2026-02-26 13:18:50,137 | INFO     | mean x: 1772107231.0196078
[2026-02-26 08:19:27] 2026-02-26 13:18:50,137 | INFO     | mean y: 2580954.9215686275
[2026-02-26 08:19:27] 2026-02-26 13:18:50,137 | INFO     | intersect: 187387466.01134163
[2026-02-26 08:19:27] 2026-02-26 13:18:50,137 | INFO     | chi2: 1.0693400150924917
[2026-02-26 08:19:27] 2026-02-26 13:18:50,137 | INFO     | current chi2=1.0693400150924917 (change=74.52676539522497 %)
[2026-02-26 08:19:27] 2026-02-26 13:18:50,137 | INFO     | sum of square deviations: 1005182768.9391928
[2026-02-26 08:19:27] 2026-02-26 13:18:50,137 | INFO     | sum of deviations: -11145590408.763515
[2026-02-26 08:19:27] 2026-02-26 13:18:50,137 | INFO     | mean x: 1772107383.5202703
[2026-02-26 08:19:27] 2026-02-26 13:18:50,137 | INFO     | mean y: 2596833.0878378376
[2026-02-26 08:19:27] 2026-02-26 13:18:50,138 | INFO     | intersect: 19651941874.99171
[2026-02-26 08:19:27] 2026-02-26 13:18:50,138 | INFO     | chi2: 0.8790210092546267
[2026-02-26 08:19:27] 2026-02-26 13:18:50,138 | INFO     | current chi2=0.8790210092546267 (change=17.797800807201956 %)
[2026-02-26 08:19:27] 2026-02-26 13:18:50,138 | INFO     | left removable region: 20
[2026-02-26 08:19:27] 2026-02-26 13:18:50,138 | INFO     | sum of square deviations: 713143072.9318188
[2026-02-26 08:19:27] 2026-02-26 13:18:50,138 | INFO     | sum of deviations: -2127566203.4318187
[2026-02-26 08:19:27] 2026-02-26 13:18:50,138 | INFO     | mean x: 1772107505.5227273
[2026-02-26 08:19:27] 2026-02-26 13:18:50,138 | INFO     | mean y: 2615165.977272727
[2026-02-26 08:19:27] 2026-02-26 13:18:50,138 | INFO     | intersect: 5289458971.523825
[2026-02-26 08:19:27] 2026-02-26 13:18:50,138 | INFO     | chi2: 0.01056201758923163
[2026-02-26 08:19:27] 2026-02-26 13:18:50,138 | INFO     | current memory leak: -2.98 B/s (using 132 data points, chi2=0.01)
[2026-02-26 08:19:27] 2026-02-26 13:18:50,139 | INFO     | could have reported an average CPU frequency of 3800 MHz (9 samples)
[2026-02-26 08:19:27] 2026-02-26 13:18:50,139 | INFO     | ..............................
[2026-02-26 08:19:27] 2026-02-26 13:18:50,139 | INFO     | . Timing measurements:
[2026-02-26 08:19:27] 2026-02-26 13:18:50,139 | INFO     | . get job = 0 s
[2026-02-26 08:19:27] 2026-02-26 13:18:50,139 | INFO     | . initial setup = 36 s
[2026-02-26 08:19:27] 2026-02-26 13:18:50,139 | INFO     | . payload setup = 35 s
[2026-02-26 08:19:27] 2026-02-26 13:18:50,139 | INFO     | . stage-in = 0 s
[2026-02-26 08:19:27] 2026-02-26 13:18:50,139 | INFO     | . payload execution = 9673 s
[2026-02-26 08:19:27] 2026-02-26 13:18:50,139 | INFO     | . stage-out = 4 s
[2026-02-26 08:19:27] 2026-02-26 13:18:50,139 | INFO     | . log creation = 0 s
[2026-02-26 08:19:27] 2026-02-26 13:18:50,139 | INFO     | ..............................
[2026-02-26 08:19:27] 2026-02-26 13:18:50,345 | INFO     | time since job start (9723s) is within the limit (349056.0s)
[2026-02-26 08:19:27] 2026-02-26 13:18:50,650 | INFO     | 
[2026-02-26 08:19:27] 2026-02-26 13:18:50,650 | INFO     | job summary report
[2026-02-26 08:19:27] 2026-02-26 13:18:50,650 | INFO     | --------------------------------------------------
[2026-02-26 08:19:27] 2026-02-26 13:18:50,650 | INFO     | PanDA job id: 7030430156
[2026-02-26 08:19:27] 2026-02-26 13:18:50,650 | INFO     | task id: 48838506
[2026-02-26 08:19:27] 2026-02-26 13:18:50,650 | INFO     | errors: (none)
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | pilot state: finished 
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | transexitcode: 0
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | exeerrorcode: 0
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | exeerrordiag: 
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | exitcode: 0
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | exitmsg: OK
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | cpuconsumptiontime: 26565 s
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | nevents: 400
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | neventsw: 0
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | pid: 2358586
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | pgrp: 2358586
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | corecount: 10
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | event service: False
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | sizes: {0: 2281181, 1: 2281866, 2: 2282327, 9713: 2310698, 9714: 2310697, 9719: 2319751, 9721: 2319935, 9722: 2320193}
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | --------------------------------------------------
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | 
[2026-02-26 08:19:27] 2026-02-26 13:18:50,651 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,871 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 08:19:27] 2026-02-26 13:18:50,872 | INFO     | job 7030430156 has completed (purged errors)
[2026-02-26 08:19:27] 2026-02-26 13:18:50,872 | INFO     | overall cleanup function is called
[2026-02-26 08:19:27] 2026-02-26 13:18:51,039 | WARNING  | process 2358586 can no longer be monitored (due to stat problems) - aborting
[2026-02-26 08:19:27] 2026-02-26 13:18:51,960 | INFO     | --- collectZombieJob: --- 10, [2358586]
[2026-02-26 08:19:27] 2026-02-26 13:18:51,960 | INFO     | zombie collector waiting for pid 2358586
[2026-02-26 08:19:27] 2026-02-26 13:18:51,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 08:19:27] 2026-02-26 13:18:51,960 | INFO     | collected zombie processes
[2026-02-26 08:19:27] 2026-02-26 13:18:51,961 | INFO     | will attempt to kill all subprocesses of pid=2358586
[2026-02-26 08:19:27] 2026-02-26 13:18:53,453 | INFO     | using path: /tmp/boinchome/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 08:19:27] 2026-02-26 13:18:53,453 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/5/PanDA_Pilot-7030430156/payload.stdout) since it has not been created yet
[2026-02-26 08:19:27] 2026-02-26 13:18:53,454 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-26 08:19:27] 2026-02-26 13:18:53,553 | INFO     | sufficient remaining disk space (168572223488 B)
[2026-02-26 08:19:27] 2026-02-26 13:18:53,553 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-26 08:19:27] 2026-02-26 13:18:53,553 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/5/PanDA_Pilot-7030430156/HITS.48838506._000544.pool.root.1 since it does not exist
[2026-02-26 08:19:27] 2026-02-26 13:18:58,051 | INFO     | process IDs to be killed: [2358586] (in reverse order)
[2026-02-26 08:19:27] 2026-02-26 13:18:58,227 | INFO     | number of running child processes to parent process 2358586: 1
[2026-02-26 08:19:27] 2026-02-26 13:18:58,227 | INFO     | maximum number of monitored processes: 6
[2026-02-26 08:19:27] 2026-02-26 13:18:58,227 | INFO     | aborting job monitoring since job object (job id=7030430156) has expired
[2026-02-26 08:19:27] 2026-02-26 13:18:59,178 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 08:19:27] 2026-02-26 13:18:59,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 08:19:27] 2026-02-26 13:18:59,219 | INFO     | did not find any defunct processes belonging to 2358586
[2026-02-26 08:19:27] 2026-02-26 13:18:59,403 | INFO     | did not find any defunct processes belonging to 2358586
[2026-02-26 08:19:27] 2026-02-26 13:18:59,403 | INFO     | ready for new job
[2026-02-26 08:19:27] 2026-02-26 13:18:59,403 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 08:19:27] 2026-02-26 13:18:59,404 | INFO     | **************************************
[2026-02-26 08:19:27] 2026-02-26 13:18:59,405 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 08:19:27] 2026-02-26 13:18:59,405 | INFO     | **************************************
[2026-02-26 08:19:27] 2026-02-26 13:18:59,405 | INFO     | 
[2026-02-26 08:19:27] 2026-02-26 13:18:59,431 | INFO     | architecture information:
[2026-02-26 08:19:27] 2026-02-26 13:18:59,459 | INFO     | executing command: cat /etc/os-release
[2026-02-26 08:19:27] 2026-02-26 13:18:59,552 | INFO     | cat /etc/os-release:
[2026-02-26 08:19:27] NAME="CentOS Linux"
[2026-02-26 08:19:27] VERSION="7 (Core)"
[2026-02-26 08:19:27] ID="centos"
[2026-02-26 08:19:27] ID_LIKE="rhel fedora"
[2026-02-26 08:19:27] VERSION_ID="7"
[2026-02-26 08:19:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 08:19:27] ANSI_COLOR="0;31"
[2026-02-26 08:19:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 08:19:27] HOME_URL="https://www.centos.org/"
[2026-02-26 08:19:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 08:19:27] 
[2026-02-26 08:19:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 08:19:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 08:19:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 08:19:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 08:19:27] 
[2026-02-26 08:19:27] 2026-02-26 13:18:59,553 | INFO     | **************************************
[2026-02-26 08:19:27] 2026-02-26 13:19:00,060 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-02-26 08:19:27] 2026-02-26 13:19:00,161 | INFO     | sufficient remaining disk space (168569077760 B)
[2026-02-26 08:19:27] 2026-02-26 13:19:00,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 08:19:27] 2026-02-26 13:19:00,162 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 08:19:27] 2026-02-26 13:19:00,162 | INFO     | update_server=False
[2026-02-26 08:19:27] 2026-02-26 13:19:00,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 08:19:27] 2026-02-26 13:19:00,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 08:19:27] 2026-02-26 13:19:00,168 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 08:19:27] 2026-02-26 13:19:00,168 | INFO     | aborting loop
[2026-02-26 08:19:27] 2026-02-26 13:19:00,252 | INFO     | all data control threads have been joined
[2026-02-26 08:19:27] 2026-02-26 13:19:00,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 08:19:27] 2026-02-26 13:19:00,667 | INFO     | all payload control threads have been joined
[2026-02-26 08:19:27] 2026-02-26 13:19:01,132 | INFO     | all job control threads have been joined
[2026-02-26 08:19:27] 2026-02-26 13:19:01,167 | INFO     | [job] retrieve thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:01,196 | INFO     | [job] queue monitor thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:01,214 | INFO     | [job] job monitor thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:01,246 | INFO     | [data] copytool_in thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:01,319 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 08:19:27] 2026-02-26 13:19:01,322 | INFO     | [data] control thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:01,557 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:01,632 | INFO     | [payload] failed_post thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:01,673 | INFO     | [payload] control thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:02,140 | INFO     | [job] control thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:02,161 | INFO     | [payload] validate_post thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:02,573 | INFO     | [job] validate thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:02,707 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:02,719 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:02,719 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:03,326 | INFO     | [data] copytool_out thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:03,501 | INFO     | [monitor] cgroup control has ended
[2026-02-26 08:19:27] 2026-02-26 13:19:04,485 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 08:19:27] 2026-02-26 13:19:04,813 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139868253058880)>', '<ExcThread(monitor, started 139867970615040)>']
[2026-02-26 08:19:27] 2026-02-26 13:19:09,841 | INFO     | all workflow threads have been joined
[2026-02-26 08:19:27] 2026-02-26 13:19:09,841 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 08:19:27] 2026-02-26 13:19:09,841 | INFO     | traces error code: 0
[2026-02-26 08:19:27] 2026-02-26 13:19:09,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 08:19:27] 2026-02-26 13:19:25,723 | INFO     | PID=2349168 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-26 08:19:27] 2026-02-26 13:19:25,723 | INFO     | .. there are 92 such processes running
[2026-02-26 08:19:27] 2026-02-26 13:19:25,723 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 08:19:27] 2026-02-26 13:19:25,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 08:19:27] 2026-02-26 13:19:25,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 08:19:27] 2026-02-26 13:19:25,723 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 08:19:27] 2026-02-26 13:19:25,723 | INFO     | [monitor] control thread has ended
[2026-02-26 08:19:27] 2026-02-26 13:19:26,378 [wrapper] ==== pilot stdout END ====
[2026-02-26 08:19:27] 2026-02-26 13:19:26,411 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 08:19:27] 2026-02-26 13:19:26,456 [wrapper] pilotpid: 2349168
[2026-02-26 08:19:27] 2026-02-26 13:19:26,508 [wrapper] Pilot exit status: 0
[2026-02-26 08:19:27] 2026-02-26 13:19:26,604 [wrapper] pandaids: 7030430156
[2026-02-26 08:19:27] 2026-02-26 13:19:26,935 [wrapper] cleanup supervisor_pilot 3582475 2349169
[2026-02-26 08:19:27] 2026-02-26 13:19:26,966 [wrapper] Test setup, not cleaning
[2026-02-26 08:19:27] 2026-02-26 13:19:27,011 [wrapper] apfmon messages muted
[2026-02-26 08:19:27] 2026-02-26 13:19:27,065 [wrapper] ==== wrapper stdout END ====
[2026-02-26 08:19:27] 2026-02-26 13:19:27,101 [wrapper] ==== wrapper stderr END ====
[2026-02-26 08:19:27]  *** Error codes and diagnostics ***
[2026-02-26 08:19:27]     "exeErrorCode": 0,
[2026-02-26 08:19:27]     "exeErrorDiag": "",
[2026-02-26 08:19:27]     "pilotErrorCode": 0,
[2026-02-26 08:19:27]     "pilotErrorDiag": "",
[2026-02-26 08:19:27]  *** Listing of results directory ***
[2026-02-26 08:19:27] total 466852
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas    584627 Feb 25 19:40 pilot3.tar.gz
[2026-02-26 08:19:27] -rwx------. 1 boincer umatlas     36322 Feb 25 19:45 runpilot2-wrapper.sh
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas      5111 Feb 25 19:47 queuedata.json
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas       100 Feb 26 05:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 08:19:27] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 26 05:35 run_atlas
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas       105 Feb 26 05:35 job.xml
[2026-02-26 08:19:27] -rw-r--r--. 2 boincer umatlas 270374866 Feb 26 05:35 EVNT.48220181._000022.pool.root.1
[2026-02-26 08:19:27] -rw-r--r--. 2 boincer umatlas     15845 Feb 26 05:35 start_atlas.sh
[2026-02-26 08:19:27] drwxrwx--x. 2 boincer umatlas      4096 Feb 26 05:35 shared
[2026-02-26 08:19:27] -rw-r--r--. 2 boincer umatlas    597952 Feb 26 05:35 input.tar.gz
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas         0 Feb 26 05:35 boinc_lockfile
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas      2562 Feb 26 05:35 pandaJob.out
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas        57 Feb 26 05:35 setup.sh.local
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas    997714 Feb 26 05:36 agis_schedconf.cvmfs.json
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas   1513015 Feb 26 05:36 agis_ddmendpoints.agis.ALL.json
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas       431 Feb 26 05:36 workernode_map.json
[2026-02-26 08:19:27] drwx------. 5 boincer umatlas      4096 Feb 26 05:36 pilot3
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas      7172 Feb 26 08:12 init_data.xml
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas 200576718 Feb 26 08:17 HITS.48838506._000544.pool.root.1
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas       529 Feb 26 08:17 boinc_task_state.xml
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas      1048 Feb 26 08:18 memory_monitor_summary.json
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas    423927 Feb 26 08:18 log.48838506._000544.job.log.tgz.1
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas        95 Feb 26 08:18 pilot_heartbeat.json
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas      6351 Feb 26 08:18 heartbeat.json
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas      8192 Feb 26 08:19 boinc_mmap_file
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas        27 Feb 26 08:19 wrapper_checkpoint.txt
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas       823 Feb 26 08:19 pilotlog.txt
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas   1166598 Feb 26 08:19 log.48838506._000544.job.log.1
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas       357 Feb 26 08:19 output.list
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas       620 Feb 26 08:19 runtime_log
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas   1607680 Feb 26 08:19 result.tar.gz
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas      9338 Feb 26 08:19 runtime_log.err
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas       655 Feb 26 08:19 IbpLDmcgeF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXo1KDm77I49n.diag
[2026-02-26 08:19:27] -rw-r--r--. 1 boincer umatlas     21552 Feb 26 08:19 stderr.txt
[2026-02-26 08:19:27] HITS file was successfully produced:
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas 200576718 Feb 26 08:17 shared/HITS.pool.root.1
[2026-02-26 08:19:27]  *** Contents of shared directory: ***
[2026-02-26 08:19:27] total 462092
[2026-02-26 08:19:27] -rw-r--r--. 2 boincer umatlas 270374866 Feb 26 05:35 ATLAS.root_0
[2026-02-26 08:19:27] -rw-r--r--. 2 boincer umatlas     15845 Feb 26 05:35 start_atlas.sh
[2026-02-26 08:19:27] -rw-r--r--. 2 boincer umatlas    597952 Feb 26 05:35 input.tar.gz
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas 200576718 Feb 26 08:17 HITS.pool.root.1
[2026-02-26 08:19:27] -rw-------. 1 boincer umatlas   1607680 Feb 26 08:19 result.tar.gz
08:19:50 (2337441): run_atlas exited; CPU time 26950.030585
08:19:50 (2337441): called boinc_finish(0)

</stderr_txt>
]]>

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