Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:36:50 (24431): wrapper (7.7.26015): starting
04:36:50 (24431): wrapper: running run_atlas (--nthreads 12)
[2026-02-26 04:36:50] Arguments: --nthreads 12
[2026-02-26 04:36:50] Threads: 12
[2026-02-26 04:36:50] Checking for CVMFS
[2026-02-26 04:36:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 04:36:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 04:36:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 04:36:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 04:36:51] 2.11.2.0 2925 419990 101048 156649 0 52 19995465 20275200 1 130560 1 176277315 99.955 23853144 17041 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-26 04:36:51] CVMFS is ok
[2026-02-26 04:36:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 04:36:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 04:36:51] Further information can be found at the LHC@home message board.
[2026-02-26 04:36:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 04:36:51] Checking for apptainer binary...
[2026-02-26 04:36:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 04:36:51] Running /usr/bin/apptainer --version
[2026-02-26 04:36:51] apptainer version 1.3.2-1.el7
[2026-02-26 04:36:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 04:36:52] c-205-10.aglt2.org
[2026-02-26 04:36:52] apptainer works
[2026-02-26 04:36:52] Set ATHENA_PROC_NUMBER=12
[2026-02-26 04:36:52] Set ATHENA_CORE_NUMBER=12
[2026-02-26 04:36:52] Starting ATLAS job with PandaID=7030431747
[2026-02-26 04:36:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 06:03:25]  *** The last 200 lines of the pilot log: ***
[2026-02-26 06:03:25]  is_altstaged=None
[2026-02-26 06:03:25]  is_tar=False
[2026-02-26 06:03:25]  lfn=log.48838416._004019.job.log.tgz.1
[2026-02-26 06:03:25]  mtime=0
[2026-02-26 06:03:25]  protocol_id=None
[2026-02-26 06:03:25]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-26 06:03:25]  replicas=None
[2026-02-26 06:03:25]  scope=mc23_13p6TeV
[2026-02-26 06:03:25]  status=None
[2026-02-26 06:03:25]  status_code=0
[2026-02-26 06:03:25]  storage_token=
[2026-02-26 06:03:25]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7030431747/log.48838416._004019.job.log.tgz.1
[2026-02-26 06:03:25]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/38/log.48838416._004019.job.log.tgz.1
[2026-02-26 06:03:25]  workdir=None
[2026-02-26 06:03:25] ]
[2026-02-26 06:03:25] 2026-02-26 11:02:23,046 | INFO     | transferring file log.48838416._004019.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7030431747/log.48838416._004019.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-26 06:03:25] 2026-02-26 11:02:23,046 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7030431747/log.48838416._004019.job.log.tgz.1 /tmp/boinchome/slots/0/log.48838416._004019.job
[2026-02-26 06:03:25] 2026-02-26 11:02:23,069 | INFO     | adding to output.list: log.48838416._004019.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c4/38/log.48838416._004019.job.log.tg
[2026-02-26 06:03:25] 2026-02-26 11:02:23,070 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-26 06:03:25] 2026-02-26 11:02:23,070 | INFO     | summary of transferred files:
[2026-02-26 06:03:25] 2026-02-26 11:02:23,070 | INFO     |  -- lfn=log.48838416._004019.job.log.tgz.1, status_code=0, status=transferred
[2026-02-26 06:03:25] 2026-02-26 11:02:23,070 | INFO     | stage-out finished correctly
[2026-02-26 06:03:25] 2026-02-26 11:02:23,471 | INFO     | PID=28304 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-26 06:03:25] 2026-02-26 11:02:23,475 | WARNING  | process 32676 can no longer be monitored (due to stat problems) - aborting
[2026-02-26 06:03:25] 2026-02-26 11:02:23,475 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7030431747/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 06:03:25] 2026-02-26 11:02:23,561 | INFO     | number of running child processes to parent process 32676: 1
[2026-02-26 06:03:25] 2026-02-26 11:02:23,561 | INFO     | maximum number of monitored processes: 6
[2026-02-26 06:03:25] 2026-02-26 11:02:24,472 | INFO     | time since job start (5112s) is within the limit (349056.0s)
[2026-02-26 06:03:25] 2026-02-26 11:02:24,622 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-26 06:03:25] 2026-02-26 11:02:24,706 | INFO     | job 7030431747 has state=finished
[2026-02-26 06:03:25] 2026-02-26 11:02:24,706 | INFO     | preparing for final server update for job 7030431747 in state='finished'
[2026-02-26 06:03:25] 2026-02-26 11:02:24,769 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-26 06:03:25] 2026-02-26 11:02:24,769 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7030431747/jobReport.json
[2026-02-26 06:03:25] 2026-02-26 11:02:24,772 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-26 06:03:25] 2026-02-26 11:02:24,773 | INFO     | this job has now completed (state=finished)
[2026-02-26 06:03:25] 2026-02-26 11:02:24,773 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-26 06:03:25] 2026-02-26 11:02:24,773 | INFO     | log transfer has been attempted: DONE
[2026-02-26 06:03:25] 2026-02-26 11:02:24,773 | INFO     | job 7030431747 has finished - writing final server update
[2026-02-26 06:03:25] 2026-02-26 11:02:24,774 | INFO     | total number of processed events: 400 (read)
[2026-02-26 06:03:25] 2026-02-26 11:02:24,776 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7030431747/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 06:03:25] 2026-02-26 11:02:24,777 | INFO     | extracted standard info from prmon json
[2026-02-26 06:03:25] 2026-02-26 11:02:24,777 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 06:03:25] 2026-02-26 11:02:24,777 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 06:03:25] 2026-02-26 11:02:24,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 06:03:25] 2026-02-26 11:02:24,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 06:03:25] 2026-02-26 11:02:24,779 | INFO     | fitting pss+swap vs Time
[2026-02-26 06:03:25] 2026-02-26 11:02:24,779 | INFO     | sum of square deviations: 141539398.0
[2026-02-26 06:03:25] 2026-02-26 11:02:24,780 | INFO     | sum of deviations: -9423437745.999998
[2026-02-26 06:03:25] 2026-02-26 11:02:24,780 | INFO     | mean x: 1772101279.0
[2026-02-26 06:03:25] 2026-02-26 11:02:24,780 | INFO     | mean y: 2848224.8441558443
[2026-02-26 06:03:25] 2026-02-26 11:02:24,780 | INFO     | intersect: 117986154062.15932
[2026-02-26 06:03:25] 2026-02-26 11:02:24,780 | INFO     | chi2: 0.09477726946375957
[2026-02-26 06:03:25] 2026-02-26 11:02:24,780 | INFO     | current memory leak: -66.58 B/s (using 77 data points, chi2=0.09)
[2026-02-26 06:03:25] 2026-02-26 11:02:24,781 | INFO     | could have reported an average CPU frequency of 1773 MHz (6 samples)
[2026-02-26 06:03:25] 2026-02-26 11:02:24,781 | INFO     | ..............................
[2026-02-26 06:03:25] 2026-02-26 11:02:24,781 | INFO     | . Timing measurements:
[2026-02-26 06:03:25] 2026-02-26 11:02:24,781 | INFO     | . get job = 0 s
[2026-02-26 06:03:25] 2026-02-26 11:02:24,781 | INFO     | . initial setup = 7 s
[2026-02-26 06:03:25] 2026-02-26 11:02:24,781 | INFO     | . payload setup = 7 s
[2026-02-26 06:03:25] 2026-02-26 11:02:24,781 | INFO     | . stage-in = 0 s
[2026-02-26 06:03:25] 2026-02-26 11:02:24,782 | INFO     | . payload execution = 5086 s
[2026-02-26 06:03:25] 2026-02-26 11:02:24,782 | INFO     | . stage-out = 0 s
[2026-02-26 06:03:25] 2026-02-26 11:02:24,782 | INFO     | . log creation = 0 s
[2026-02-26 06:03:25] 2026-02-26 11:02:24,782 | INFO     | ..............................
[2026-02-26 06:03:25] 2026-02-26 11:02:24,860 | INFO     | 
[2026-02-26 06:03:25] 2026-02-26 11:02:24,861 | INFO     | job summary report
[2026-02-26 06:03:25] 2026-02-26 11:02:24,861 | INFO     | --------------------------------------------------
[2026-02-26 06:03:25] 2026-02-26 11:02:24,861 | INFO     | PanDA job id: 7030431747
[2026-02-26 06:03:25] 2026-02-26 11:02:24,861 | INFO     | task id: 48838416
[2026-02-26 06:03:25] 2026-02-26 11:02:24,861 | INFO     | errors: (none)
[2026-02-26 06:03:25] 2026-02-26 11:02:24,861 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 06:03:25] 2026-02-26 11:02:24,862 | INFO     | pilot state: finished 
[2026-02-26 06:03:25] 2026-02-26 11:02:24,862 | INFO     | transexitcode: 0
[2026-02-26 06:03:25] 2026-02-26 11:02:24,862 | INFO     | exeerrorcode: 0
[2026-02-26 06:03:25] 2026-02-26 11:02:24,862 | INFO     | exeerrordiag: 
[2026-02-26 06:03:25] 2026-02-26 11:02:24,862 | INFO     | exitcode: 0
[2026-02-26 06:03:25] 2026-02-26 11:02:24,862 | INFO     | exitmsg: OK
[2026-02-26 06:03:25] 2026-02-26 11:02:24,863 | INFO     | cpuconsumptiontime: 55671 s
[2026-02-26 06:03:25] 2026-02-26 11:02:24,863 | INFO     | nevents: 400
[2026-02-26 06:03:25] 2026-02-26 11:02:24,863 | INFO     | neventsw: 0
[2026-02-26 06:03:25] 2026-02-26 11:02:24,863 | INFO     | pid: 32676
[2026-02-26 06:03:25] 2026-02-26 11:02:24,863 | INFO     | pgrp: 32676
[2026-02-26 06:03:25] 2026-02-26 11:02:24,863 | INFO     | corecount: 12
[2026-02-26 06:03:25] 2026-02-26 11:02:24,863 | INFO     | event service: False
[2026-02-26 06:03:25] 2026-02-26 11:02:24,864 | INFO     | sizes: {0: 2282279, 11: 2282279, 5097: 2308585, 5099: 2317583, 5101: 2317833}
[2026-02-26 06:03:25] 2026-02-26 11:02:24,864 | INFO     | --------------------------------------------------
[2026-02-26 06:03:25] 2026-02-26 11:02:24,864 | INFO     | 
[2026-02-26 06:03:25] 2026-02-26 11:02:24,864 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-26 06:03:25] 2026-02-26 11:02:24,886 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,887 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,887 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,887 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,888 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,888 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,888 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,888 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,890 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 06:03:25] 2026-02-26 11:02:24,890 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,890 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 06:03:25] 2026-02-26 11:02:24,890 | INFO     | job 7030431747 has completed (purged errors)
[2026-02-26 06:03:25] 2026-02-26 11:02:24,890 | INFO     | overall cleanup function is called
[2026-02-26 06:03:25] 2026-02-26 11:02:25,899 | INFO     | --- collectZombieJob: --- 10, [32676]
[2026-02-26 06:03:25] 2026-02-26 11:02:25,899 | INFO     | zombie collector waiting for pid 32676
[2026-02-26 06:03:25] 2026-02-26 11:02:25,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 06:03:25] 2026-02-26 11:02:25,899 | INFO     | collected zombie processes
[2026-02-26 06:03:25] 2026-02-26 11:02:25,899 | INFO     | will attempt to kill all subprocesses of pid=32676
[2026-02-26 06:03:25] 2026-02-26 11:02:25,990 | INFO     | process IDs to be killed: [32676] (in reverse order)
[2026-02-26 06:03:25] 2026-02-26 11:02:26,039 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 06:03:25] 2026-02-26 11:02:26,039 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 06:03:25] 2026-02-26 11:02:26,043 | INFO     | did not find any defunct processes belonging to 32676
[2026-02-26 06:03:25] 2026-02-26 11:02:26,046 | INFO     | did not find any defunct processes belonging to 32676
[2026-02-26 06:03:25] 2026-02-26 11:02:26,046 | INFO     | ready for new job
[2026-02-26 06:03:25] 2026-02-26 11:02:26,046 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 06:03:25] 2026-02-26 11:02:26,048 | INFO     | **************************************
[2026-02-26 06:03:25] 2026-02-26 11:02:26,048 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 06:03:25] 2026-02-26 11:02:26,048 | INFO     | **************************************
[2026-02-26 06:03:25] 2026-02-26 11:02:26,048 | INFO     | 
[2026-02-26 06:03:25] 2026-02-26 11:02:26,049 | INFO     | architecture information:
[2026-02-26 06:03:25] 2026-02-26 11:02:26,049 | INFO     | executing command: cat /etc/os-release
[2026-02-26 06:03:25] 2026-02-26 11:02:26,063 | INFO     | cat /etc/os-release:
[2026-02-26 06:03:25] NAME="CentOS Linux"
[2026-02-26 06:03:25] VERSION="7 (Core)"
[2026-02-26 06:03:25] ID="centos"
[2026-02-26 06:03:25] ID_LIKE="rhel fedora"
[2026-02-26 06:03:25] VERSION_ID="7"
[2026-02-26 06:03:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 06:03:25] ANSI_COLOR="0;31"
[2026-02-26 06:03:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 06:03:25] HOME_URL="https://www.centos.org/"
[2026-02-26 06:03:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 06:03:25] 
[2026-02-26 06:03:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 06:03:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 06:03:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 06:03:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 06:03:25] 
[2026-02-26 06:03:25] 2026-02-26 11:02:26,063 | INFO     | **************************************
[2026-02-26 06:03:25] 2026-02-26 11:02:26,566 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-26 06:03:25] 2026-02-26 11:02:26,583 | INFO     | sufficient remaining disk space (29153558528 B)
[2026-02-26 06:03:25] 2026-02-26 11:02:26,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 06:03:25] 2026-02-26 11:02:26,583 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 06:03:25] 2026-02-26 11:02:26,584 | INFO     | update_server=False
[2026-02-26 06:03:25] 2026-02-26 11:02:26,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 06:03:25] 2026-02-26 11:02:26,584 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 06:03:25] 2026-02-26 11:02:26,584 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 06:03:25] 2026-02-26 11:02:26,585 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 06:03:25] 2026-02-26 11:02:26,856 | INFO     | all payload control threads have been joined
[2026-02-26 06:03:25] 2026-02-26 11:02:27,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 06:03:25] 2026-02-26 11:02:27,069 | INFO     | aborting loop
[2026-02-26 06:03:25] 2026-02-26 11:02:27,072 | INFO     | all data control threads have been joined
[2026-02-26 06:03:25] 2026-02-26 11:02:27,072 | INFO     | all job control threads have been joined
[2026-02-26 06:03:25] 2026-02-26 11:02:27,589 | INFO     | [job] retrieve thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:27,590 | INFO     | [job] queue monitor thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:27,861 | INFO     | [payload] control thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:27,921 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:28,074 | INFO     | [job] job monitor thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:28,075 | INFO     | [job] control thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:28,078 | INFO     | [data] control thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:28,264 | INFO     | [job] validate thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:28,412 | INFO     | [payload] validate_post thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:28,590 | INFO     | [data] copytool_out thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:28,626 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:28,785 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:28,792 | INFO     | [data] copytool_in thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:29,100 | INFO     | [payload] failed_post thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:30,590 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:36,954 | INFO     | job.realtimelogging is not enabled
[2026-02-26 06:03:25] 2026-02-26 11:02:37,959 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 06:03:25] 2026-02-26 11:02:56,556 | INFO     | 5121s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-26 06:03:25] 2026-02-26 11:02:57,673 | INFO     | PID=28304 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-26 06:03:25] 2026-02-26 11:02:57,673 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 06:03:25] 2026-02-26 11:02:57,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 06:03:25] 2026-02-26 11:02:57,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 06:03:25] 2026-02-26 11:03:20,215 | INFO     | [monitor] cgroup control has ended
[2026-02-26 06:03:25] 2026-02-26 11:03:20,348 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139714032871232)>', '<ExcThread(monitor, started 139713457411840)>']
[2026-02-26 06:03:25] 2026-02-26 11:03:20,782 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 06:03:25] 2026-02-26 11:03:20,782 | INFO     | [monitor] control thread has ended
[2026-02-26 06:03:25] 2026-02-26 11:03:25,374 | INFO     | all workflow threads have been joined
[2026-02-26 06:03:25] 2026-02-26 11:03:25,374 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 06:03:25] 2026-02-26 11:03:25,374 | INFO     | traces error code: 0
[2026-02-26 06:03:25] 2026-02-26 11:03:25,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 06:03:25] 2026-02-26 11:03:25,460 [wrapper] ==== pilot stdout END ====
[2026-02-26 06:03:25] 2026-02-26 11:03:25,463 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 06:03:25] 2026-02-26 11:03:25,467 [wrapper] pilotpid: 28304
[2026-02-26 06:03:25] 2026-02-26 11:03:25,471 [wrapper] Pilot exit status: 0
[2026-02-26 06:03:25] 2026-02-26 11:03:25,488 [wrapper] pandaids: 7030431747
[2026-02-26 06:03:25] 2026-02-26 11:03:25,535 [wrapper] cleanup supervisor_pilot 22587 28305
[2026-02-26 06:03:25] 2026-02-26 11:03:25,539 [wrapper] Test setup, not cleaning
[2026-02-26 06:03:25] 2026-02-26 11:03:25,543 [wrapper] apfmon messages muted
[2026-02-26 06:03:25] 2026-02-26 11:03:25,547 [wrapper] ==== wrapper stdout END ====
[2026-02-26 06:03:25] 2026-02-26 11:03:25,551 [wrapper] ==== wrapper stderr END ====
[2026-02-26 06:03:25]  *** Error codes and diagnostics ***
[2026-02-26 06:03:25]     "exeErrorCode": 0,
[2026-02-26 06:03:25]     "exeErrorDiag": "",
[2026-02-26 06:03:25]     "pilotErrorCode": 0,
[2026-02-26 06:03:25]     "pilotErrorDiag": "",
[2026-02-26 06:03:25]  *** Listing of results directory ***
[2026-02-26 06:03:25] total 516196
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas    584627 Feb 25 19:40 pilot3.tar.gz
[2026-02-26 06:03:25] -rwx------ 1 boincer umatlas     36322 Feb 25 19:43 runpilot2-wrapper.sh
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas      5111 Feb 25 19:45 queuedata.json
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas       100 Feb 26 04:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 06:03:25] -rwxr-xr-x 1 boincer umatlas      7986 Feb 26 04:36 run_atlas
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas       105 Feb 26 04:36 job.xml
[2026-02-26 06:03:25] -rw-r--r-- 2 boincer umatlas 293019341 Feb 26 04:36 EVNT.48220085._000169.pool.root.1
[2026-02-26 06:03:25] -rw-r--r-- 2 boincer umatlas     15845 Feb 26 04:36 start_atlas.sh
[2026-02-26 06:03:25] drwxrwx--x 2 boincer umatlas      4096 Feb 26 04:36 shared
[2026-02-26 06:03:25] -rw-r--r-- 2 boincer umatlas    597963 Feb 26 04:36 input.tar.gz
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas         0 Feb 26 04:36 boinc_lockfile
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas      2567 Feb 26 04:36 pandaJob.out
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas        57 Feb 26 04:36 setup.sh.local
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas    997714 Feb 26 04:37 agis_schedconf.cvmfs.json
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas   1513015 Feb 26 04:37 agis_ddmendpoints.agis.ALL.json
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas       433 Feb 26 04:37 workernode_map.json
[2026-02-26 06:03:25] drwx------ 5 boincer umatlas      4096 Feb 26 04:37 pilot3
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas      5953 Feb 26 06:00 init_data.xml
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas 229399067 Feb 26 06:01 HITS.48838416._004019.pool.root.1
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas       529 Feb 26 06:02 boinc_task_state.xml
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas        95 Feb 26 06:02 pilot_heartbeat.json
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas      1048 Feb 26 06:02 memory_monitor_summary.json
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas    385721 Feb 26 06:02 log.48838416._004019.job.log.tgz.1
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas      6411 Feb 26 06:02 heartbeat.json
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas      8192 Feb 26 06:03 boinc_mmap_file
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas        27 Feb 26 06:03 wrapper_checkpoint.txt
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas      4929 Feb 26 06:03 pilotlog.txt
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas    737203 Feb 26 06:03 log.48838416._004019.job.log.1
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas       357 Feb 26 06:03 output.list
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas       620 Feb 26 06:03 runtime_log
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas   1136640 Feb 26 06:03 result.tar.gz
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas      9343 Feb 26 06:03 runtime_log.err
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas       660 Feb 26 06:03 P7kLDm2eeF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmNzzKDmcJGyOm.diag
[2026-02-26 06:03:25] -rw-r--r-- 1 boincer umatlas     21578 Feb 26 06:03 stderr.txt
[2026-02-26 06:03:25] HITS file was successfully produced:
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas 229399067 Feb 26 06:01 shared/HITS.pool.root.1
[2026-02-26 06:03:25]  *** Contents of shared directory: ***
[2026-02-26 06:03:25] total 511888
[2026-02-26 06:03:25] -rw-r--r-- 2 boincer umatlas 293019341 Feb 26 04:36 ATLAS.root_0
[2026-02-26 06:03:25] -rw-r--r-- 2 boincer umatlas     15845 Feb 26 04:36 start_atlas.sh
[2026-02-26 06:03:25] -rw-r--r-- 2 boincer umatlas    597963 Feb 26 04:36 input.tar.gz
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas 229399067 Feb 26 06:01 HITS.pool.root.1
[2026-02-26 06:03:25] -rw------- 1 boincer umatlas   1136640 Feb 26 06:03 result.tar.gz
06:03:26 (24431): run_atlas exited; CPU time 55588.341954
06:03:26 (24431): called boinc_finish(0)

</stderr_txt>
]]>

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