Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-26 16:12:57 (1865561): vboxwrapper version 26210
2026-02-26 16:12:57 (1865561): BOINC client version: 8.2.8
2026-02-26 16:12:57 (1865561): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-02-26 16:12:57 (1865561): Successfully copied 'init_data.xml' to the shared directory.
2026-02-26 16:12:58 (1865561): Create VM. (boinc_5996f043c5fe6276, slot#3)
2026-02-26 16:12:58 (1865561): Setting Memory Size for VM. (4800MB)
2026-02-26 16:12:58 (1865561): Setting CPU Count for VM. (8)
2026-02-26 16:12:58 (1865561): Setting Chipset Options for VM.
2026-02-26 16:12:58 (1865561): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-26 16:12:58 (1865561): Setting Boot Options for VM.
2026-02-26 16:12:58 (1865561): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-26 16:12:59 (1865561): Enabling VM Network Access.
2026-02-26 16:12:59 (1865561): Disabling USB Support for VM.
2026-02-26 16:12:59 (1865561): Disabling COM Port Support for VM.
2026-02-26 16:12:59 (1865561): Disabling LPT Port Support for VM.
2026-02-26 16:12:59 (1865561): Disabling Audio Support for VM.
2026-02-26 16:12:59 (1865561): Disabling Clipboard Support for VM.
2026-02-26 16:12:59 (1865561): Disabling Drag and Drop Support for VM.
2026-02-26 16:12:59 (1865561): Adding storage controller(s) to VM.
2026-02-26 16:13:00 (1865561): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-26 16:13:00 (1865561): Adding VirtualBox Guest Additions to VM.
2026-02-26 16:13:00 (1865561): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-26 16:13:00 (1865561): forwarding host port 45067 to guest port 80
2026-02-26 16:13:00 (1865561): Enabling remote desktop for VM.
2026-02-26 16:13:00 (1865561): Required extension pack not installed, remote desktop not enabled.
2026-02-26 16:13:00 (1865561): Enabling shared directory for VM.
2026-02-26 16:13:01 (1865561): Starting VM using VBoxManage interface. (boinc_5996f043c5fe6276, slot#3)
2026-02-26 16:13:02 (1865561): Successfully started VM. (PID = '1866209')
2026-02-26 16:13:02 (1865561): Reporting VM Process ID to BOINC.
2026-02-26 16:13:02 (1865561): Guest Log: BIOS: VirtualBox 7.2.2
2026-02-26 16:13:02 (1865561): Guest Log: CPUID EDX: 0x178bfbff
2026-02-26 16:13:02 (1865561): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-26 16:13:02 (1865561): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-26 16:13:02 (1865561): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-26 16:13:02 (1865561): Detected: Web Application Enabled (http://localhost:45067)
2026-02-26 16:13:02 (1865561): Preference change detected
2026-02-26 16:13:02 (1865561): Setting CPU throttle for VM. (100%)
2026-02-26 16:13:02 (1865561): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-26 16:13:04 (1865561): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-26 16:13:04 (1865561): Guest Log: BIOS: Booting from Hard Disk...
2026-02-26 16:13:07 (1865561): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-26 16:13:07 (1865561): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-26 16:13:07 (1865561): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-26 16:13:13 (1865561): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-26 16:13:13 (1865561): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-26 16:13:19 (1865561): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-26 16:13:19 (1865561): Guest Log: 00:00:00.000141 main     Log opened 2026-02-26T22:13:16.950236000Z
2026-02-26 16:13:19 (1865561): Guest Log: 00:00:00.000215 main     OS Product: Linux
2026-02-26 16:13:19 (1865561): Guest Log: 00:00:00.000242 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-26 16:13:19 (1865561): Guest Log: 00:00:00.000262 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-26 16:13:19 (1865561): Guest Log: 00:00:00.000283 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-26 16:13:19 (1865561): Guest Log: 00:00:00.000284 main     Process ID: 1369
2026-02-26 16:13:19 (1865561): Guest Log: 00:00:00.000285 main     Package type: LINUX_64BITS_GENERIC
2026-02-26 16:13:19 (1865561): Guest Log: 00:00:00.001690 main     5.2.32 r132073 started. Verbose level = 0
2026-02-26 16:13:19 (1865561): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-26 16:13:19 (1865561): Guest Log: [INFO] Mounting shared directory
2026-02-26 16:13:19 (1865561): Guest Log: [INFO] Checking for init_data.xml
2026-02-26 16:13:23 (1865561): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-26 16:13:23 (1865561): Guest Log: [INFO] Detected branch: prod
2026-02-26 16:13:23 (1865561): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-26 16:13:23 (1865561): Guest Log: Copying input files
2026-02-26 16:13:25 (1865561): Guest Log: Copied input files into RunAtlas.
2026-02-26 16:13:25 (1865561): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-26 16:13:25 (1865561): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-26 16:13:25 (1865561): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-26 16:13:25 (1865561): Guest Log: Further information can be found at the LHC@home message board.
2026-02-26 16:14:35 (1865561): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-26 16:14:35 (1865561): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-26 16:14:35 (1865561): Guest Log: 2.6.3.0 1646 1 32360 156669 4 1 3120742 4096001 0 65024 0 0 n/a 1336 127 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-26 16:14:39 (1865561): Guest Log: copied the webapp to /var/www
2026-02-26 16:14:39 (1865561): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-26 16:14:39 (1865561): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-26 16:14:39 (1865561): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-26 16:14:39 (1865561): Guest Log:  *** Starting ATLAS job. (PandaID=7030499564 taskID=48838610) ***
2026-02-26 17:13:57 (1865561): VM state change detected. (old = 'running', new = 'paused')
2026-02-26 20:39:51 (1865561): VM state change detected. (old = 'paused', new = 'running')
2026-02-26 20:39:52 (1865561): Guest Log: 01:00:40.965528 timesync vgsvcTimeSyncWorker: Radical host time change: 12 364 563 000 000ns (HostNow=1 772 159 992 733 000 000 ns HostLast=1 772 147 628 170 000 000 ns)
2026-02-26 20:40:02 (1865561): Guest Log: 01:00:50.966461 timesync vgsvcTimeSyncWorker: Radical guest time change: 12 364 840 362 000ns (GuestNow=1 772 160 002 744 947 000 ns GuestLast=1 772 147 637 904 585 000 ns fSetTimeLastLoop=true )
2026-02-26 21:17:59 (1865561): Status Report: Elapsed Time: '6000.000000'
2026-02-26 21:17:59 (1865561): Status Report: CPU Time: '42077.350000'
2026-02-26 21:40:51 (1865561): VM state change detected. (old = 'running', new = 'paused')
2026-02-27 00:52:09 (1865561): VM state change detected. (old = 'paused', new = 'running')
2026-02-27 00:52:11 (1865561): Guest Log: 02:01:41.572899 timesync vgsvcTimeSyncWorker: Radical host time change: 11 488 371 000 000ns (HostNow=1 772 175 131 759 000 000 ns HostLast=1 772 163 643 388 000 000 ns)
2026-02-27 00:52:21 (1865561): Guest Log: 02:01:51.577487 timesync vgsvcTimeSyncWorker: Radical guest time change: 11 488 412 719 000ns (GuestNow=1 772 175 141 763 696 000 ns GuestLast=1 772 163 653 350 977 000 ns fSetTimeLastLoop=true )
2026-02-27 01:06:55 (1865561): Guest Log:  *** Job finished ***
2026-02-27 01:06:55 (1865561): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:38,604 | INFO     | all workflow threads have been joined
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:38,605 | INFO     | end of generic workflow (traces error code: 0)
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:38,605 | INFO     | traces error code: 0
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:38,605 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,605 | INFO     | PID=6100 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,606 | INFO     | found 0 job(s) in 20 queues
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,606 | INFO     | [monitor] control thread has ended
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,683 [wrapper] ==== pilot stdout END ====
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,688 [wrapper] ==== wrapper stdout RESUME ====
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,694 [wrapper] pilotpid: 6100
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,699 [wrapper] Pilot exit status: 0
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,798 [wrapper] pandaids: 7030499564
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,833 [wrapper] cleanup supervisor_pilot 26480 6101
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,841 [wrapper] Test setup, not cleaning
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,847 [wrapper] apfmon messages muted
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,852 [wrapper] ==== wrapper stdout END ====
2026-02-27 01:06:55 (1865561): Guest Log: 2026-02-27 07:06:51,858 [wrapper] ==== wrapper stderr END ====
2026-02-27 01:06:55 (1865561): Guest Log:  *** Error codes and diagnostics ***
2026-02-27 01:06:55 (1865561): Guest Log:     "exeErrorCode": 0,
2026-02-27 01:06:55 (1865561): Guest Log:     "exeErrorDiag": "",
2026-02-27 01:06:55 (1865561): Guest Log:     "pilotErrorCode": 0,
2026-02-27 01:06:55 (1865561): Guest Log:     "pilotErrorDiag": "",
2026-02-27 01:06:55 (1865561): Guest Log:  *** Listing of results directory ***
2026-02-27 01:06:55 (1865561): Guest Log: total 204580
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 26 04:42 pilot3.tar.gz
2026-02-27 01:06:55 (1865561): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 26 04:44 runpilot2-wrapper.sh
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 26 04:45 queuedata.json
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 atlas atlas    597974 Feb 26 22:13 input.tar.gz
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 atlas atlas      8863 Feb 26 22:13 init_data.xml
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Feb 26 22:13 start_atlas.sh
2026-02-27 01:06:55 (1865561): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 22:13 EVNT.48343779._000015.pool.root.1 -> /data/./ATLAS.root_0
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 atlas atlas      2576 Feb 26 22:14 pandaJob.out
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas    998489 Feb 26 22:15 agis_schedconf.cvmfs.json
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas       426 Feb 26 22:16 workernode_map.json
2026-02-27 01:06:55 (1865561): Guest Log: drwx------. 5 atlas atlas      4096 Feb 26 22:16 pilot3
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas 202619177 Feb 27 07:05 HITS.48838610._000370.pool.root.1
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas      1031 Feb 27 07:06 memory_monitor_summary.json
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 27 07:06 agis_ddmendpoints.agis.ALL.json
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas    380650 Feb 27 07:06 log.48838610._000370.job.log.tgz.1
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas      6370 Feb 27 07:06 heartbeat.json
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas        98 Feb 27 07:06 pilot_heartbeat.json
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas       744 Feb 27 07:06 pilotlog.txt
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas   1129369 Feb 27 07:06 log.48838610._000370.job.log.1
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas       357 Feb 27 07:06 output.list
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 27 07:06 runtime_log
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas   1525760 Feb 27 07:06 result.tar.gz
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 atlas atlas      8740 Feb 27 07:06 runtime_log.err
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas       652 Feb 27 07:06 KXdNDmePiF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmc91KDm9vLytn.diag
2026-02-27 01:06:55 (1865561): Guest Log: Looking for outputfile HITS.48838610._000370.pool.root.1
2026-02-27 01:06:55 (1865561): Guest Log: HITS file was successfully produced
2026-02-27 01:06:55 (1865561): Guest Log: -rw-------. 1 atlas atlas 202619177 Feb 27 07:05 /home/atlas/RunAtlas/HITS.48838610._000370.pool.root.1
2026-02-27 01:06:55 (1865561): Guest Log: Successfully finished the ATLAS job!
2026-02-27 01:06:55 (1865561): Guest Log: Copying the results back to the shared directory!
2026-02-27 01:06:55 (1865561): Guest Log:  *** Contents of shared directory: ***
2026-02-27 01:06:55 (1865561): Guest Log: total 264964
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 root root 269162725 Feb 26 22:12 ATLAS.root_0
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 root root      8863 Feb 26 22:12 init_data.xml
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 root root    597974 Feb 26 22:12 input.tar.gz
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 root root   1525760 Feb 27 07:06 result.tar.gz
2026-02-27 01:06:55 (1865561): Guest Log: -rw-r--r--. 1 root root     15845 Feb 26 22:12 start_atlas.sh
2026-02-27 01:06:55 (1865561): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-27 01:06:55 (1865561): VM Completion File Detected.
2026-02-27 01:06:55 (1865561): Powering off VM.
2026-02-27 01:06:55 (1865561): Successfully stopped VM.
2026-02-27 01:06:55 (1865561): Deregistering VM. (boinc_5996f043c5fe6276, slot#3)
2026-02-27 01:06:55 (1865561): Removing network bandwidth throttle group from VM.
2026-02-27 01:06:55 (1865561): Removing VM from VirtualBox.
2026-02-27 01:07:00 (1865561): called boinc_finish(0)

</stderr_txt>
]]>

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