Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:45:19 (659139): wrapper (7.7.26015): starting
04:45:19 (659139): wrapper: running run_atlas (--nthreads 12)
[2026-02-26 04:45:19] Arguments: --nthreads 12
[2026-02-26 04:45:19] Threads: 12
[2026-02-26 04:45:19] Checking for CVMFS
[2026-02-26 04:45:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 04:45:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 04:45:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 04:45:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 04:45:22] 2.11.5.0 3306151 125709 203592 156655 0 414 38300558 45568001 24590 130560 0 719518136 99.809 431281243 21779 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-26 04:45:22] CVMFS is ok
[2026-02-26 04:45:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 04:45:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 04:45:22] Further information can be found at the LHC@home message board.
[2026-02-26 04:45:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 04:45:22] Checking for apptainer binary...
[2026-02-26 04:45:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 04:45:22] Running /usr/bin/apptainer --version
[2026-02-26 04:45:22] apptainer version 1.4.1-1.el9
[2026-02-26 04:45:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 04:45:23] wns0041.triumf.lcg
[2026-02-26 04:45:23] apptainer works
[2026-02-26 04:45:23] Set ATHENA_PROC_NUMBER=12
[2026-02-26 04:45:23] Set ATHENA_CORE_NUMBER=12
[2026-02-26 04:45:23] Starting ATLAS job with PandaID=7030568226
[2026-02-26 04:45:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 04:52:06]  *** The last 200 lines of the pilot log: ***
[2026-02-26 04:52:06] 2026-02-26 12:51:21,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 04:52:06] 2026-02-26 12:51:21,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 04:52:06] 2026-02-26 12:51:21,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 04:52:06] 2026-02-26 12:51:21,067 | WARNING  | wrong length of table data, x=[1772110103.0], y=[1435.0] (must be same and length>=4)
[2026-02-26 04:52:06] 2026-02-26 12:51:21,067 | INFO     | could have reported an average CPU frequency of 1446 MHz (4 samples)
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | ..............................
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . Timing measurements:
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . get job = 0 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . initial setup = 41 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . payload setup = 44 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . stage-in = 0 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . payload execution = 86 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . stage-out = 1 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . log creation = 0 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | ..............................
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-26 04:52:06] 2026-02-26 12:51:21,069 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030568226/pilotlog.txt
[2026-02-26 04:52:06] 2026-02-26 12:51:21,120 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-26 04:52:06] - Log from pilotlog.txt -
[2026-02-26 04:52:06] 2026-02-26 12:51:21,064 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7030568226/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 04:52:06] 2026-02-26 12:51:21,066 | INFO     | extracted standard info from prmon json
[2026-02-26 04:52:06] 2026-02-26 12:51:21,066 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 04:52:06] 2026-02-26 12:51:21,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 04:52:06] 2026-02-26 12:51:21,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 04:52:06] 2026-02-26 12:51:21,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 04:52:06] 2026-02-26 12:51:21,067 | WARNING  | wrong length of table data, x=[1772110103.0], y=[1435.0] (must be same and length>=4)
[2026-02-26 04:52:06] 2026-02-26 12:51:21,067 | INFO     | could have reported an average CPU frequency of 1446 MHz (4 samples)
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | ..............................
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . Timing measurements:
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . get job = 0 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . initial setup = 41 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . payload setup = 44 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . stage-in = 0 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . payload execution = 86 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . stage-out = 1 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . log creation = 0 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | ..............................
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-26 04:52:06] 2026-02-26 12:51:21,069 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030568226/pilotlog.txt
[2026-02-26 04:52:06] 2026-02-26 12:51:21,121 | WARNING  | 
[2026-02-26 04:52:06] [begin log extracts]
[2026-02-26 04:52:06] - Log from pilotlog.txt -
[2026-02-26 04:52:06] 2026-02-26 12:51:21,064 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7030568226/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 04:52:06] 2026-02-26 12:51:21,066 | INFO     | extracted standard info from prmon json
[2026-02-26 04:52:06] 2026-02-26 12:51:21,066 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 04:52:06] 2026-02-26 12:51:21,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 04:52:06] 2026-02-26 12:51:21,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 04:52:06] 2026-02-26 12:51:21,067 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 04:52:06] 2026-02-26 12:51:21,067 | WARNING  | wrong length of table data, x=[1772110103.0], y=[1435.0] (must be same and length>=4)
[2026-02-26 04:52:06] 2026-02-26 12:51:21,067 | INFO     | could have reported an average CPU frequency of 1446 MHz (4 samples)
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | ..............................
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . Timing measurements:
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . get job = 0 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . initial setup = 41 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . payload setup = 44 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . stage-in = 0 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . payload execution = 86 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . stage-out = 1 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | . log creation = 0 s
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | ..............................
[2026-02-26 04:52:06] 2026-02-26 12:51:21,068 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-26 04:52:06] 2026-02-26 12:51:21,069 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030568226/pilotlog.txt
[2026-02-26 04:52:06] [end log extracts]
[2026-02-26 04:52:06] 2026-02-26 12:51:21,121 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-26 04:52:06] 2026-02-26 12:51:21,122 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-26 04:52:06] 2026-02-26 12:51:22,016 | INFO     | 
[2026-02-26 04:52:06] 2026-02-26 12:51:22,016 | INFO     | job summary report
[2026-02-26 04:52:06] 2026-02-26 12:51:22,016 | INFO     | --------------------------------------------------
[2026-02-26 04:52:06] 2026-02-26 12:51:22,016 | INFO     | PanDA job id: 7030568226
[2026-02-26 04:52:06] 2026-02-26 12:51:22,016 | INFO     | task id: 48838521
[2026-02-26 04:52:06] 2026-02-26 12:51:22,017 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-26 04:49:06,206 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-26 04:52:06] 2026-02-26 12:51:22,017 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 04:52:06] 2026-02-26 12:51:22,017 | INFO     | pilot state: failed 
[2026-02-26 04:52:06] 2026-02-26 12:51:22,017 | INFO     | transexitcode: 65
[2026-02-26 04:52:06] 2026-02-26 12:51:22,017 | INFO     | exeerrorcode: 65
[2026-02-26 04:52:06] 2026-02-26 12:51:22,017 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-26 04:52:06] 2026-02-26 12:51:22,017 | INFO     | exitcode: 65
[2026-02-26 04:52:06] 2026-02-26 12:51:22,017 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-26 04:52:06] 2026-02-26 12:51:22,017 | INFO     | cpuconsumptiontime: 23 s
[2026-02-26 04:52:06] 2026-02-26 12:51:22,017 | INFO     | nevents: 0
[2026-02-26 04:52:06] 2026-02-26 12:51:22,017 | INFO     | neventsw: 0
[2026-02-26 04:52:06] 2026-02-26 12:51:22,018 | INFO     | pid: 677216
[2026-02-26 04:52:06] 2026-02-26 12:51:22,018 | INFO     | pgrp: 677216
[2026-02-26 04:52:06] 2026-02-26 12:51:22,018 | INFO     | corecount: 12
[2026-02-26 04:52:06] 2026-02-26 12:51:22,018 | INFO     | event service: False
[2026-02-26 04:52:06] 2026-02-26 12:51:22,018 | INFO     | sizes: {0: 2281835, 1: 2282296, 2: 2282296, 135: 2305527, 137: 2309819, 141: 2309847, 260: 2310141}
[2026-02-26 04:52:06] 2026-02-26 12:51:22,018 | INFO     | --------------------------------------------------
[2026-02-26 04:52:06] 2026-02-26 12:51:22,018 | INFO     | 
[2026-02-26 04:52:06] 2026-02-26 12:51:22,018 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-26 04:52:06] 2026-02-26 12:51:22,301 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,302 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,309 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,310 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,311 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,311 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,315 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,315 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,315 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,315 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,316 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 04:52:06] 2026-02-26 12:51:22,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,316 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 04:52:06] 2026-02-26 12:51:22,316 | INFO     | job 7030568226 has completed (purged errors)
[2026-02-26 04:52:06] 2026-02-26 12:51:22,316 | INFO     | overall cleanup function is called
[2026-02-26 04:52:06] 2026-02-26 12:51:23,330 | INFO     | --- collectZombieJob: --- 10, [677216]
[2026-02-26 04:52:06] 2026-02-26 12:51:23,330 | INFO     | zombie collector waiting for pid 677216
[2026-02-26 04:52:06] 2026-02-26 12:51:23,330 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 04:52:06] 2026-02-26 12:51:23,330 | INFO     | collected zombie processes
[2026-02-26 04:52:06] 2026-02-26 12:51:23,330 | INFO     | will attempt to kill all subprocesses of pid=677216
[2026-02-26 04:52:06] 2026-02-26 12:51:23,915 | INFO     | process IDs to be killed: [677216] (in reverse order)
[2026-02-26 04:52:06] 2026-02-26 12:51:24,359 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 04:52:06] 2026-02-26 12:51:24,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 04:52:06] 2026-02-26 12:51:24,381 | INFO     | did not find any defunct processes belonging to 677216
[2026-02-26 04:52:06] 2026-02-26 12:51:24,396 | INFO     | did not find any defunct processes belonging to 677216
[2026-02-26 04:52:06] 2026-02-26 12:51:24,397 | INFO     | ready for new job
[2026-02-26 04:52:06] 2026-02-26 12:51:24,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 04:52:06] 2026-02-26 12:51:24,399 | INFO     | **************************************
[2026-02-26 04:52:06] 2026-02-26 12:51:24,399 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 04:52:06] 2026-02-26 12:51:24,399 | INFO     | **************************************
[2026-02-26 04:52:06] 2026-02-26 12:51:24,399 | INFO     | 
[2026-02-26 04:52:06] 2026-02-26 12:51:24,403 | INFO     | architecture information:
[2026-02-26 04:52:06] 2026-02-26 12:51:24,403 | INFO     | executing command: cat /etc/os-release
[2026-02-26 04:52:06] 2026-02-26 12:51:24,428 | INFO     | cat /etc/os-release:
[2026-02-26 04:52:06] NAME="CentOS Linux"
[2026-02-26 04:52:06] VERSION="7 (Core)"
[2026-02-26 04:52:06] ID="centos"
[2026-02-26 04:52:06] ID_LIKE="rhel fedora"
[2026-02-26 04:52:06] VERSION_ID="7"
[2026-02-26 04:52:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 04:52:06] ANSI_COLOR="0;31"
[2026-02-26 04:52:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 04:52:06] HOME_URL="https://www.centos.org/"
[2026-02-26 04:52:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 04:52:06] 
[2026-02-26 04:52:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 04:52:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 04:52:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 04:52:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 04:52:06] 
[2026-02-26 04:52:06] 2026-02-26 12:51:24,428 | INFO     | **************************************
[2026-02-26 04:52:06] 2026-02-26 12:51:24,933 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-26 04:52:06] 2026-02-26 12:51:24,975 | INFO     | sufficient remaining disk space (2056342470656 B)
[2026-02-26 04:52:06] 2026-02-26 12:51:24,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 04:52:06] 2026-02-26 12:51:24,976 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 04:52:06] 2026-02-26 12:51:24,976 | INFO     | update_server=False
[2026-02-26 04:52:06] 2026-02-26 12:51:24,976 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 04:52:06] 2026-02-26 12:51:24,986 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 04:52:06] 2026-02-26 12:51:25,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 04:52:06] 2026-02-26 12:51:25,429 | INFO     | aborting loop
[2026-02-26 04:52:06] 2026-02-26 12:51:25,455 | INFO     | all payload control threads have been joined
[2026-02-26 04:52:06] 2026-02-26 12:51:25,589 | INFO     | all job control threads have been joined
[2026-02-26 04:52:06] 2026-02-26 12:51:25,827 | INFO     | all data control threads have been joined
[2026-02-26 04:52:06] 2026-02-26 12:51:25,982 | INFO     | [job] retrieve thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:26,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 04:52:06] 2026-02-26 12:51:26,080 | INFO     | [payload] validate_post thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:26,133 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:26,356 | INFO     | [job] validate thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:26,435 | INFO     | [job] job monitor thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:26,461 | INFO     | [payload] control thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:26,500 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:26,595 | INFO     | [job] control thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:26,833 | INFO     | [data] control thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:26,876 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 04:52:06] 2026-02-26 12:51:26,994 | INFO     | [data] copytool_out thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:27,030 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:27,075 | INFO     | [payload] failed_post thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:27,098 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:27,127 | INFO     | [data] copytool_in thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:27,882 | INFO     | [job] queue monitor thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:30,037 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 04:52:06] 2026-02-26 12:51:55,323 | INFO     | PID=664629 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-26 04:52:06] 2026-02-26 12:51:55,323 | INFO     | .. there are 42 such processes running
[2026-02-26 04:52:06] 2026-02-26 12:51:55,324 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 04:52:06] 2026-02-26 12:51:55,324 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 04:52:06] 2026-02-26 12:51:55,324 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 04:52:06] 2026-02-26 12:51:59,687 | INFO     | [monitor] cgroup control has ended
[2026-02-26 04:52:06] 2026-02-26 12:51:59,844 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015253641024)>', '<ExcThread(monitor, started 140014700709632)>']
[2026-02-26 04:52:06] 2026-02-26 12:52:00,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 04:52:06] 2026-02-26 12:52:00,358 | INFO     | [monitor] control thread has ended
[2026-02-26 04:52:06] 2026-02-26 12:52:04,870 | INFO     | all workflow threads have been joined
[2026-02-26 04:52:06] 2026-02-26 12:52:04,870 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 04:52:06] 2026-02-26 12:52:04,870 | INFO     | traces error code: 0
[2026-02-26 04:52:06] 2026-02-26 12:52:04,871 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 04:52:06] 2026-02-26 12:52:05,289 [wrapper] ==== pilot stdout END ====
[2026-02-26 04:52:06] 2026-02-26 12:52:05,292 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 04:52:06] 2026-02-26 12:52:05,295 [wrapper] pilotpid: 664629
[2026-02-26 04:52:06] 2026-02-26 12:52:05,298 [wrapper] Pilot exit status: 0
[2026-02-26 04:52:06] 2026-02-26 12:52:05,317 [wrapper] pandaids: 7030568226
[2026-02-26 04:52:06] 2026-02-26 12:52:05,412 [wrapper] cleanup supervisor_pilot  664647 664630
[2026-02-26 04:52:06] 2026-02-26 12:52:05,415 [wrapper] Test setup, not cleaning
[2026-02-26 04:52:06] 2026-02-26 12:52:05,432 [wrapper] apfmon messages muted
[2026-02-26 04:52:06] 2026-02-26 12:52:05,451 [wrapper] ==== wrapper stdout END ====
[2026-02-26 04:52:06] 2026-02-26 12:52:05,471 [wrapper] ==== wrapper stderr END ====
[2026-02-26 04:52:06]  *** Error codes and diagnostics ***
[2026-02-26 04:52:06]     "exeErrorCode": 65,
[2026-02-26 04:52:06]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-26 04:52:06]     "pilotErrorCode": 1305,
[2026-02-26 04:52:06]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-26 04:52:06]  *** Listing of results directory ***
[2026-02-26 04:52:06] total 270756
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc    584627 Feb 25 23:13 pilot3.tar.gz
[2026-02-26 04:52:06] -rwx------. 1 boinc boinc     36322 Feb 25 23:14 runpilot2-wrapper.sh
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc      5111 Feb 25 23:16 queuedata.json
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc       100 Feb 26 04:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 04:52:06] -rwxr-xr-x. 1 boinc boinc      7986 Feb 26 04:45 run_atlas
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc       105 Feb 26 04:45 job.xml
[2026-02-26 04:52:06] -rw-r--r--. 2 boinc boinc 273099154 Feb 26 04:45 EVNT.48343683._000026.pool.root.1
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc      6594 Feb 26 04:45 init_data.xml
[2026-02-26 04:52:06] -rw-r--r--. 2 boinc boinc     15845 Feb 26 04:45 start_atlas.sh
[2026-02-26 04:52:06] drwxrwx--x. 2 boinc boinc      4096 Feb 26 04:45 shared
[2026-02-26 04:52:06] -rw-r--r--. 2 boinc boinc    597956 Feb 26 04:45 input.tar.gz
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc         0 Feb 26 04:45 boinc_lockfile
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc      2562 Feb 26 04:45 pandaJob.out
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc    997668 Feb 26 04:46 agis_schedconf.cvmfs.json
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc   1513015 Feb 26 04:46 agis_ddmendpoints.agis.ALL.json
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc       445 Feb 26 04:46 workernode_map.json
[2026-02-26 04:52:06] drwx------. 5 boinc boinc      4096 Feb 26 04:47 pilot3
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc       524 Feb 26 04:49 boinc_task_state.xml
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc       959 Feb 26 04:49 memory_monitor_summary.json
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc     21626 Feb 26 04:49 log.48838521._000572.job.log.tgz.1
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc      7021 Feb 26 04:51 heartbeat.json
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc      8192 Feb 26 04:51 boinc_mmap_file
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc        23 Feb 26 04:51 wrapper_checkpoint.txt
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc        95 Feb 26 04:51 pilot_heartbeat.json
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc      4818 Feb 26 04:52 pilotlog.txt
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc     91423 Feb 26 04:52 log.48838521._000572.job.log.1
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc       188 Feb 26 04:52 output.list
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc       620 Feb 26 04:52 runtime_log
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc    133120 Feb 26 04:52 result.tar.gz
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc      8635 Feb 26 04:52 runtime_log.err
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc       643 Feb 26 04:52 rdWMDmukkF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmkg0KDmesoQcm.diag
[2026-02-26 04:52:06] -rw-r--r--. 1 boinc boinc     21771 Feb 26 04:52 stderr.txt
[2026-02-26 04:52:06] No HITS result produced
[2026-02-26 04:52:06]  *** Contents of shared directory: ***
[2026-02-26 04:52:06] total 267436
[2026-02-26 04:52:06] -rw-r--r--. 2 boinc boinc 273099154 Feb 26 04:45 ATLAS.root_0
[2026-02-26 04:52:06] -rw-r--r--. 2 boinc boinc     15845 Feb 26 04:45 start_atlas.sh
[2026-02-26 04:52:06] -rw-r--r--. 2 boinc boinc    597956 Feb 26 04:45 input.tar.gz
[2026-02-26 04:52:06] -rw-------. 1 boinc boinc    133120 Feb 26 04:52 result.tar.gz
04:52:07 (659139): run_atlas exited; CPU time 37.383780
04:52:07 (659139): called boinc_finish(0)

</stderr_txt>
]]>

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