Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:51:58 (1659296): wrapper (7.7.26015): starting
22:51:58 (1659296): wrapper: running run_atlas (--nthreads 4)
[2026-02-26 22:51:58] Arguments: --nthreads 4
[2026-02-26 22:51:58] Threads: 4
[2026-02-26 22:51:58] Checking for CVMFS
[2026-02-26 22:51:58] No cvmfs_config command found, will try listing directly
[2026-02-26 22:51:58] CVMFS is ok
[2026-02-26 22:51:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 22:51:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 22:51:58] Further information can be found at the LHC@home message board.
[2026-02-26 22:51:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 22:51:58] Checking for apptainer binary...
[2026-02-26 22:51:58] which: no apptainer in ((null))
[2026-02-26 22:51:58] apptainer is not installed, using version from CVMFS
[2026-02-26 22:51:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 22:51:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot80/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-02-26 22:51:58] apptainer works
[2026-02-26 22:51:58] Set ATHENA_PROC_NUMBER=4
[2026-02-26 22:51:58] Set ATHENA_CORE_NUMBER=4
[2026-02-26 22:51:58] Starting ATLAS job with PandaID=7030547786
[2026-02-26 22:51:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot80/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 02:03:06]  *** The last 200 lines of the pilot log: ***
[2026-02-27 02:03:06] 2026-02-27 01:01:58,208 | INFO     | preparing for final server update for job 7030547786 in state='finished'
[2026-02-27 02:03:06] 2026-02-27 01:01:58,208 | INFO     | reading metadata from: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-7030547786/jobReport.json
[2026-02-27 02:03:06] 2026-02-27 01:01:58,210 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot80/slots/0/workernode_map.json
[2026-02-27 02:03:06] 2026-02-27 01:01:58,211 | INFO     | this job has now completed (state=finished)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,211 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,211 | INFO     | log transfer has been attempted: DONE
[2026-02-27 02:03:06] 2026-02-27 01:01:58,211 | INFO     | job 7030547786 has finished - writing final server update
[2026-02-27 02:03:06] 2026-02-27 01:01:58,211 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_504919/.job.ad'
[2026-02-27 02:03:06] 2026-02-27 01:01:58,212 | INFO     | total number of processed events: 400 (read)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,224 | INFO     | time since job start (11378s) is within the limit (349056.0s)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,238 | INFO     | using path: /scratch/boinc/var/slot80/slots/0/PanDA_Pilot-7030547786/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,239 | INFO     | extracted standard info from prmon json
[2026-02-27 02:03:06] 2026-02-27 01:01:58,239 | INFO     | extracted standard memory fields from prmon json
[2026-02-27 02:03:06] 2026-02-27 01:01:58,239 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-27 02:03:06] 2026-02-27 01:01:58,239 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-27 02:03:06] 2026-02-27 01:01:58,239 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-27 02:03:06] 2026-02-27 01:01:58,243 | INFO     | fitting pss+swap vs Time
[2026-02-27 02:03:06] 2026-02-27 01:01:58,243 | INFO     | sum of square deviations: 1995291368.4784968
[2026-02-27 02:03:06] 2026-02-27 01:01:58,244 | INFO     | sum of deviations: 24271699403.53764
[2026-02-27 02:03:06] 2026-02-27 01:01:58,245 | INFO     | mean x: 1772148410.5107527
[2026-02-27 02:03:06] 2026-02-27 01:01:58,245 | INFO     | mean y: 2341009.7311827955
[2026-02-27 02:03:06] 2026-02-27 01:01:58,245 | INFO     | intersect: -21554938392.110508
[2026-02-27 02:03:06] 2026-02-27 01:01:58,245 | INFO     | chi2: 1.3358559303473097
[2026-02-27 02:03:06] 2026-02-27 01:01:58,245 | INFO     | sum of square deviations: 1838665785.977896
[2026-02-27 02:03:06] 2026-02-27 01:01:58,247 | INFO     | sum of deviations: 23517069263.34254
[2026-02-27 02:03:06] 2026-02-27 01:01:58,247 | INFO     | mean x: 1772148258.0110497
[2026-02-27 02:03:06] 2026-02-27 01:01:58,247 | INFO     | mean y: 2340274.8287292817
[2026-02-27 02:03:06] 2026-02-27 01:01:58,247 | INFO     | intersect: -22663950492.30621
[2026-02-27 02:03:06] 2026-02-27 01:01:58,247 | INFO     | chi2: 1.3366990663320066
[2026-02-27 02:03:06] 2026-02-27 01:01:58,247 | INFO     | current chi2=1.3366990663320066 (change=-0.06311578708025635 %)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,247 | INFO     | right removable region: 180
[2026-02-27 02:03:06] 2026-02-27 01:01:58,248 | INFO     | sum of square deviations: 1838664565.977896
[2026-02-27 02:03:06] 2026-02-27 01:01:58,249 | INFO     | sum of deviations: 113411924.7624311
[2026-02-27 02:03:06] 2026-02-27 01:01:58,249 | INFO     | mean x: 1772148563.0110497
[2026-02-27 02:03:06] 2026-02-27 01:01:58,249 | INFO     | mean y: 2364209.6187845306
[2026-02-27 02:03:06] 2026-02-27 01:01:58,249 | INFO     | intersect: -106944896.13926691
[2026-02-27 02:03:06] 2026-02-27 01:01:58,249 | INFO     | chi2: 0.003052817292819862
[2026-02-27 02:03:06] 2026-02-27 01:01:58,249 | INFO     | current chi2=0.003052817292819862 (change=99.77147106783991 %)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,250 | INFO     | sum of square deviations: 1690456525.9772716
[2026-02-27 02:03:06] 2026-02-27 01:01:58,251 | INFO     | sum of deviations: 398512456.03409106
[2026-02-27 02:03:06] 2026-02-27 01:01:58,251 | INFO     | mean x: 1772148715.5113637
[2026-02-27 02:03:06] 2026-02-27 01:01:58,251 | INFO     | mean y: 2363913.7329545454
[2026-02-27 02:03:06] 2026-02-27 01:01:58,251 | INFO     | intersect: -415406863.7011576
[2026-02-27 02:03:06] 2026-02-27 01:01:58,251 | INFO     | chi2: 0.0028663096271773396
[2026-02-27 02:03:06] 2026-02-27 01:01:58,252 | INFO     | current chi2=0.0028663096271773396 (change=6.1093621973769245 %)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,252 | INFO     | left removable region: 20
[2026-02-27 02:03:06] 2026-02-27 01:01:58,252 | INFO     | sum of square deviations: 1270057457.975002
[2026-02-27 02:03:06] 2026-02-27 01:01:58,253 | INFO     | sum of deviations: 1815956289.3374999
[2026-02-27 02:03:06] 2026-02-27 01:01:58,253 | INFO     | mean x: 1772148837.5125
[2026-02-27 02:03:06] 2026-02-27 01:01:58,253 | INFO     | mean y: 2361926.58125
[2026-02-27 02:03:06] 2026-02-27 01:01:58,253 | INFO     | intersect: -2531495740.1844883
[2026-02-27 02:03:06] 2026-02-27 01:01:58,254 | INFO     | chi2: 0.0006921556123295813
[2026-02-27 02:03:06] 2026-02-27 01:01:58,254 | INFO     | current memory leak: 1.43 B/s (using 160 data points, chi2=0.00)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,254 | INFO     | could have reported an average CPU frequency of 2687 MHz (10 samples)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,254 | INFO     | ..............................
[2026-02-27 02:03:06] 2026-02-27 01:01:58,254 | INFO     | . Timing measurements:
[2026-02-27 02:03:06] 2026-02-27 01:01:58,254 | INFO     | . get job = 0 s
[2026-02-27 02:03:06] 2026-02-27 01:01:58,255 | INFO     | . initial setup = 8 s
[2026-02-27 02:03:06] 2026-02-27 01:01:58,255 | INFO     | . payload setup = 8 s
[2026-02-27 02:03:06] 2026-02-27 01:01:58,255 | INFO     | . stage-in = 0 s
[2026-02-27 02:03:06] 2026-02-27 01:01:58,255 | INFO     | . payload execution = 11348 s
[2026-02-27 02:03:06] 2026-02-27 01:01:58,255 | INFO     | . stage-out = 1 s
[2026-02-27 02:03:06] 2026-02-27 01:01:58,255 | INFO     | . log creation = 0 s
[2026-02-27 02:03:06] 2026-02-27 01:01:58,255 | INFO     | ..............................
[2026-02-27 02:03:06] 2026-02-27 01:01:58,353 | INFO     | 
[2026-02-27 02:03:06] 2026-02-27 01:01:58,354 | INFO     | job summary report
[2026-02-27 02:03:06] 2026-02-27 01:01:58,354 | INFO     | --------------------------------------------------
[2026-02-27 02:03:06] 2026-02-27 01:01:58,354 | INFO     | PanDA job id: 7030547786
[2026-02-27 02:03:06] 2026-02-27 01:01:58,354 | INFO     | task id: 48838447
[2026-02-27 02:03:06] 2026-02-27 01:01:58,354 | INFO     | errors: (none)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,354 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 02:03:06] 2026-02-27 01:01:58,354 | INFO     | pilot state: finished 
[2026-02-27 02:03:06] 2026-02-27 01:01:58,354 | INFO     | transexitcode: 0
[2026-02-27 02:03:06] 2026-02-27 01:01:58,354 | INFO     | exeerrorcode: 0
[2026-02-27 02:03:06] 2026-02-27 01:01:58,355 | INFO     | exeerrordiag: 
[2026-02-27 02:03:06] 2026-02-27 01:01:58,355 | INFO     | exitcode: 0
[2026-02-27 02:03:06] 2026-02-27 01:01:58,355 | INFO     | exitmsg: OK
[2026-02-27 02:03:06] 2026-02-27 01:01:58,355 | INFO     | cpuconsumptiontime: 42809 s
[2026-02-27 02:03:06] 2026-02-27 01:01:58,355 | INFO     | nevents: 400
[2026-02-27 02:03:06] 2026-02-27 01:01:58,355 | INFO     | neventsw: 0
[2026-02-27 02:03:06] 2026-02-27 01:01:58,355 | INFO     | pid: 1675778
[2026-02-27 02:03:06] 2026-02-27 01:01:58,355 | INFO     | pgrp: 1675778
[2026-02-27 02:03:06] 2026-02-27 01:01:58,355 | INFO     | corecount: 4
[2026-02-27 02:03:06] 2026-02-27 01:01:58,355 | INFO     | event service: False
[2026-02-27 02:03:06] 2026-02-27 01:01:58,356 | INFO     | sizes: {0: 2282287, 11: 2282287, 11361: 2312119, 11363: 2321139, 11364: 2321195, 11366: 2321389}
[2026-02-27 02:03:06] 2026-02-27 01:01:58,356 | INFO     | --------------------------------------------------
[2026-02-27 02:03:06] 2026-02-27 01:01:58,356 | INFO     | 
[2026-02-27 02:03:06] 2026-02-27 01:01:58,356 | INFO     | executing command: ls -lF /scratch/boinc/var/slot80/slots/0
[2026-02-27 02:03:06] 2026-02-27 01:01:58,388 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,389 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,389 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,389 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,389 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,390 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,390 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,390 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,390 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 02:03:06] 2026-02-27 01:01:58,391 | INFO     | job 7030547786 has completed (purged errors)
[2026-02-27 02:03:06] 2026-02-27 01:01:58,391 | INFO     | overall cleanup function is called
[2026-02-27 02:03:06] 2026-02-27 01:01:59,399 | INFO     | --- collectZombieJob: --- 10, [1675778]
[2026-02-27 02:03:06] 2026-02-27 01:01:59,400 | INFO     | zombie collector waiting for pid 1675778
[2026-02-27 02:03:06] 2026-02-27 01:01:59,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 02:03:06] 2026-02-27 01:01:59,400 | INFO     | collected zombie processes
[2026-02-27 02:03:06] 2026-02-27 01:01:59,400 | INFO     | will attempt to kill all subprocesses of pid=1675778
[2026-02-27 02:03:06] 2026-02-27 01:02:00,234 | INFO     | process IDs to be killed: [1675778] (in reverse order)
[2026-02-27 02:03:06] 2026-02-27 01:02:00,555 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 02:03:06] 2026-02-27 01:02:00,556 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 02:03:06] 2026-02-27 01:02:00,586 | INFO     | did not find any defunct processes belonging to 1675778
[2026-02-27 02:03:06] 2026-02-27 01:02:00,615 | INFO     | did not find any defunct processes belonging to 1675778
[2026-02-27 02:03:06] 2026-02-27 01:02:00,615 | INFO     | ready for new job
[2026-02-27 02:03:06] 2026-02-27 01:02:00,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 02:03:06] 2026-02-27 01:02:00,618 | INFO     | **************************************
[2026-02-27 02:03:06] 2026-02-27 01:02:00,618 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 02:03:06] 2026-02-27 01:02:00,618 | INFO     | **************************************
[2026-02-27 02:03:06] 2026-02-27 01:02:00,618 | INFO     | 
[2026-02-27 02:03:06] 2026-02-27 01:02:00,630 | INFO     | architecture information:
[2026-02-27 02:03:06] 2026-02-27 01:02:00,631 | INFO     | executing command: cat /etc/os-release
[2026-02-27 02:03:06] 2026-02-27 01:02:00,658 | INFO     | cat /etc/os-release:
[2026-02-27 02:03:06] NAME="CentOS Linux"
[2026-02-27 02:03:06] VERSION="7 (Core)"
[2026-02-27 02:03:06] ID="centos"
[2026-02-27 02:03:06] ID_LIKE="rhel fedora"
[2026-02-27 02:03:06] VERSION_ID="7"
[2026-02-27 02:03:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 02:03:06] ANSI_COLOR="0;31"
[2026-02-27 02:03:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 02:03:06] HOME_URL="https://www.centos.org/"
[2026-02-27 02:03:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 02:03:06] 
[2026-02-27 02:03:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 02:03:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 02:03:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 02:03:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 02:03:06] 
[2026-02-27 02:03:06] 2026-02-27 01:02:00,659 | INFO     | **************************************
[2026-02-27 02:03:06] 2026-02-27 01:02:01,162 | INFO     | executing command: df -mP /scratch/boinc/var/slot80/slots/0
[2026-02-27 02:03:06] 2026-02-27 01:02:01,188 | INFO     | sufficient remaining disk space (3291524104192 B)
[2026-02-27 02:03:06] 2026-02-27 01:02:01,189 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 02:03:06] 2026-02-27 01:02:01,189 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 02:03:06] 2026-02-27 01:02:01,189 | INFO     | update_server=False
[2026-02-27 02:03:06] 2026-02-27 01:02:01,189 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 02:03:06] 2026-02-27 01:02:01,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 02:03:06] 2026-02-27 01:02:02,098 | INFO     | all data control threads have been joined
[2026-02-27 02:03:06] 2026-02-27 01:02:02,099 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 02:03:06] 2026-02-27 01:02:02,100 | INFO     | aborting loop
[2026-02-27 02:03:06] 2026-02-27 01:02:02,134 | INFO     | all job control threads have been joined
[2026-02-27 02:03:06] 2026-02-27 01:02:02,195 | INFO     | [job] retrieve thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:02,263 | INFO     | [data] copytool_in thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:02,280 | INFO     | [payload] validate_post thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:02,351 | INFO     | all payload control threads have been joined
[2026-02-27 02:03:06] 2026-02-27 01:02:02,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 02:03:06] 2026-02-27 01:02:02,828 | INFO     | [job] validate thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:02,850 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:02,901 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:02,917 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:03,104 | INFO     | [data] control thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:03,104 | INFO     | [job] job monitor thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:03,139 | INFO     | [job] control thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:03,195 | INFO     | [data] copytool_out thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:03,356 | INFO     | [payload] control thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:03,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 02:03:06] 2026-02-27 01:02:03,544 | INFO     | [payload] failed_post thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:04,368 | INFO     | [job] queue monitor thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:06,527 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:12,174 | INFO     | job.realtimelogging is not enabled
[2026-02-27 02:03:06] 2026-02-27 01:02:13,179 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 02:03:06] 2026-02-27 01:02:32,245 | INFO     | PID=1665379 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-27 02:03:06] 2026-02-27 01:02:32,248 | INFO     | .. there are 20 such processes running
[2026-02-27 02:03:06] 2026-02-27 01:02:32,249 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 02:03:06] 2026-02-27 01:02:32,249 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 02:03:06] 2026-02-27 01:02:32,249 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 02:03:06] 2026-02-27 01:02:39,268 | INFO     | [monitor] cgroup control has ended
[2026-02-27 02:03:06] 2026-02-27 01:02:39,918 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23367584302912)>', '<ExcThread(monitor, started 23367337113344)>']
[2026-02-27 02:03:06] 2026-02-27 01:02:40,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 02:03:06] 2026-02-27 01:02:40,295 | INFO     | [monitor] control thread has ended
[2026-02-27 02:03:06] 2026-02-27 01:02:44,943 | INFO     | all workflow threads have been joined
[2026-02-27 02:03:06] 2026-02-27 01:02:44,944 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 02:03:06] 2026-02-27 01:02:44,944 | INFO     | traces error code: 0
[2026-02-27 02:03:06] 2026-02-27 01:02:44,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 02:03:06] 2026-02-27 01:02:45,101 [wrapper] ==== pilot stdout END ====
[2026-02-27 02:03:06] 2026-02-27 01:02:45,105 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 02:03:06] 2026-02-27 01:02:45,109 [wrapper] pilotpid: 1665379
[2026-02-27 02:03:06] 2026-02-27 01:02:45,113 [wrapper] Pilot exit status: 0
[2026-02-27 02:03:06] 2026-02-27 01:02:45,127 [wrapper] pandaids: 7030547786
[2026-02-27 02:03:06] 2026-02-27 01:02:45,344 [wrapper] cleanup supervisor_pilot 2026560 1665380
[2026-02-27 02:03:06] 2026-02-27 01:02:45,348 [wrapper] Test setup, not cleaning
[2026-02-27 02:03:06] 2026-02-27 01:02:45,356 [wrapper] apfmon messages muted
[2026-02-27 02:03:06] 2026-02-27 01:02:45,362 [wrapper] ==== wrapper stdout END ====
[2026-02-27 02:03:06] 2026-02-27 01:02:45,366 [wrapper] ==== wrapper stderr END ====
[2026-02-27 02:03:06]  *** Error codes and diagnostics ***
[2026-02-27 02:03:06]     "exeErrorCode": 0,
[2026-02-27 02:03:06]     "exeErrorDiag": "",
[2026-02-27 02:03:06]     "pilotErrorCode": 0,
[2026-02-27 02:03:06]     "pilotErrorDiag": "",
[2026-02-27 02:03:06]  *** Listing of results directory ***
[2026-02-27 02:03:06] total 486500
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc    584627 Feb 26 08:13 pilot3.tar.gz
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc      5111 Feb 26 08:13 queuedata.json
[2026-02-27 02:03:06] -rwx------ 1 boinc boinc     36322 Feb 26 08:13 runpilot2-wrapper.sh
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc       100 Feb 26 22:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 02:03:06] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 22:51 run_atlas
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc       105 Feb 26 22:51 job.xml
[2026-02-27 02:03:06] -rw-r--r-- 2 boinc boinc 278547898 Feb 26 22:51 EVNT.48220117._000041.pool.root.1
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc      6696 Feb 26 22:51 init_data.xml
[2026-02-27 02:03:06] -rw-r--r-- 2 boinc boinc     15845 Feb 26 22:51 start_atlas.sh
[2026-02-27 02:03:06] drwxrwx--x 2 boinc boinc      4096 Feb 26 22:51 shared
[2026-02-27 02:03:06] -rw-r--r-- 2 boinc boinc    597964 Feb 26 22:51 input.tar.gz
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc         0 Feb 26 22:51 boinc_lockfile
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc      2568 Feb 26 22:51 pandaJob.out
[2026-02-27 02:03:06] -rw------- 1 boinc boinc    998489 Feb 26 22:52 agis_schedconf.cvmfs.json
[2026-02-27 02:03:06] -rw------- 1 boinc boinc       443 Feb 26 22:52 workernode_map.json
[2026-02-27 02:03:06] drwx------ 5 boinc boinc      4096 Feb 26 22:52 pilot3
[2026-02-27 02:03:06] -rw------- 1 boinc boinc 211862765 Feb 27 02:01 HITS.48838447._000952.pool.root.1
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc       528 Feb 27 02:01 boinc_task_state.xml
[2026-02-27 02:03:06] -rw------- 1 boinc boinc      1030 Feb 27 02:01 memory_monitor_summary.json
[2026-02-27 02:03:06] -rw------- 1 boinc boinc   1513015 Feb 27 02:01 agis_ddmendpoints.agis.ALL.json
[2026-02-27 02:03:06] -rw------- 1 boinc boinc    347365 Feb 27 02:01 log.48838447._000952.job.log.tgz.1
[2026-02-27 02:03:06] -rw------- 1 boinc boinc      6343 Feb 27 02:01 heartbeat.json
[2026-02-27 02:03:06] -rw------- 1 boinc boinc        95 Feb 27 02:02 pilot_heartbeat.json
[2026-02-27 02:03:06] -rw------- 1 boinc boinc      4904 Feb 27 02:02 pilotlog.txt
[2026-02-27 02:03:06] -rw------- 1 boinc boinc   1570665 Feb 27 02:02 log.48838447._000952.job.log.1
[2026-02-27 02:03:06] -rw------- 1 boinc boinc       357 Feb 27 02:02 output.list
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc       620 Feb 27 02:02 runtime_log
[2026-02-27 02:03:06] -rw------- 1 boinc boinc   1935360 Feb 27 02:02 result.tar.gz
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc      9205 Feb 27 02:02 runtime_log.err
[2026-02-27 02:03:06] -rw------- 1 boinc boinc       666 Feb 27 02:02 dXnKDm1jkF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmwa0KDms16qwn.diag
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc        26 Feb 27 02:02 wrapper_checkpoint.txt
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc      8192 Feb 27 02:03 boinc_mmap_file
[2026-02-27 02:03:06] -rw-r--r-- 1 boinc boinc     21197 Feb 27 02:03 stderr.txt
[2026-02-27 02:03:06] HITS file was successfully produced:
[2026-02-27 02:03:06] -rw------- 1 boinc boinc 211862765 Feb 27 02:01 shared/HITS.pool.root.1
[2026-02-27 02:03:06]  *** Contents of shared directory: ***
[2026-02-27 02:03:06] total 481420
[2026-02-27 02:03:06] -rw-r--r-- 2 boinc boinc 278547898 Feb 26 22:51 ATLAS.root_0
[2026-02-27 02:03:06] -rw-r--r-- 2 boinc boinc     15845 Feb 26 22:51 start_atlas.sh
[2026-02-27 02:03:06] -rw-r--r-- 2 boinc boinc    597964 Feb 26 22:51 input.tar.gz
[2026-02-27 02:03:06] -rw------- 1 boinc boinc 211862765 Feb 27 02:01 HITS.pool.root.1
[2026-02-27 02:03:06] -rw------- 1 boinc boinc   1935360 Feb 27 02:02 result.tar.gz
02:03:07 (1659296): run_atlas exited; CPU time 43494.030539
02:03:07 (1659296): called boinc_finish(0)

</stderr_txt>
]]>

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