Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:40:17 (223090): wrapper (7.7.26015): starting
18:40:17 (223090): wrapper: running run_atlas (--nthreads 3)
[2026-02-26 18:40:17] Arguments: --nthreads 3
[2026-02-26 18:40:17] Threads: 3
[2026-02-26 18:40:17] Checking for CVMFS
[2026-02-26 18:40:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 18:40:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 18:40:18] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 18:40:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 18:40:18] 2.9.2.0 39710 1429 62316 156662 2 50 26029736 36864000 0 130560 0 524676 99.977 57610 13472 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-26 18:40:18] CVMFS is ok
[2026-02-26 18:40:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 18:40:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 18:40:18] Further information can be found at the LHC@home message board.
[2026-02-26 18:40:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 18:40:18] Checking for apptainer binary...
[2026-02-26 18:40:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 18:40:18] Running /usr/bin/apptainer --version
[2026-02-26 18:40:18] apptainer version 1.4.1-1.1
[2026-02-26 18:40:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 18:40:18] cosA133a
[2026-02-26 18:40:18] apptainer works
[2026-02-26 18:40:18] Set ATHENA_PROC_NUMBER=3
[2026-02-26 18:40:18] Set ATHENA_CORE_NUMBER=3
[2026-02-26 18:40:18] Starting ATLAS job with PandaID=7030454858
[2026-02-26 18:40:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 20:27:49]  *** The last 200 lines of the pilot log: ***
[2026-02-26 20:27:49] 2026-02-26 19:26:50,076 | INFO     | will abort loop
[2026-02-26 20:27:49] 2026-02-26 19:26:50,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 20:27:49] 2026-02-26 19:26:51,080 | INFO     | [job] retrieve thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:51,081 | INFO     | [job] queue monitor thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:51,082 | INFO     | [job] job monitor thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:51,089 | INFO     | all data control threads have been joined
[2026-02-26 20:27:49] 2026-02-26 19:26:51,258 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:51,264 | INFO     | all payload control threads have been joined
[2026-02-26 20:27:49] 2026-02-26 19:26:51,310 | INFO     | all job control threads have been joined
[2026-02-26 20:27:49] 2026-02-26 19:26:51,329 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:51,516 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:51,547 | INFO     | [payload] failed_post thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:51,654 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:51,729 | INFO     | [data] copytool_in thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:51,833 | INFO     | [job] validate thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:52,047 | INFO     | [payload] validate_post thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:52,080 | INFO     | [data] copytool_out thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:52,095 | INFO     | [data] control thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:52,270 | INFO     | [payload] control thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:52,316 | INFO     | [job] control thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:26:53,336 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 20:27:49] 2026-02-26 19:26:57,343 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 20:27:49] 2026-02-26 19:27:20,053 | INFO     | PID=227135 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-26 20:27:49] 2026-02-26 19:27:20,054 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 20:27:49] 2026-02-26 19:27:20,054 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 20:27:49] 2026-02-26 19:27:20,054 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 20:27:49] 2026-02-26 19:27:42,631 | INFO     | [monitor] cgroup control has ended
[2026-02-26 20:27:49] 2026-02-26 19:27:44,203 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140459125851968)>', '<ExcThread(monitor, started 140458483234560)>']
[2026-02-26 20:27:49] 2026-02-26 19:27:45,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 20:27:49] 2026-02-26 19:27:45,182 | INFO     | [monitor] control thread has ended
[2026-02-26 20:27:49] 2026-02-26 19:27:49,216 | INFO     | all workflow threads have been joined
[2026-02-26 20:27:49] 2026-02-26 19:27:49,217 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 20:27:49] 2026-02-26 19:27:49,217 | INFO     | traces error code: 0
[2026-02-26 20:27:49] 2026-02-26 19:27:49,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 20:27:49] 2026-02-26 19:27:49,264 [wrapper] ==== pilot stdout END ====
[2026-02-26 20:27:49] 2026-02-26 19:27:49,267 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 20:27:49] 2026-02-26 19:27:49,270 [wrapper] pilotpid: 227135
[2026-02-26 20:27:49] 2026-02-26 19:27:49,273 [wrapper] Pilot exit status: 0
[2026-02-26 20:27:49] 2026-02-26 19:27:49,281 [wrapper] pandaids: 7030454858
[2026-02-26 20:27:49] 2026-02-26 19:27:49,298 [wrapper] cleanup supervisor_pilot  236926 227136
[2026-02-26 20:27:49] 2026-02-26 19:27:49,301 [wrapper] Test setup, not cleaning
[2026-02-26 20:27:49] 2026-02-26 19:27:49,303 [wrapper] apfmon messages muted
[2026-02-26 20:27:49] 2026-02-26 19:27:49,306 [wrapper] ==== wrapper stdout END ====
[2026-02-26 20:27:49] 2026-02-26 19:27:49,309 [wrapper] ==== wrapper stderr END ====
[2026-02-26 20:27:49]  *** Error codes and diagnostics ***
[2026-02-26 20:27:49]     "exeErrorCode": 0,
[2026-02-26 20:27:49]     "exeErrorDiag": "",
[2026-02-26 20:27:49]     "pilotErrorCode": 0,
[2026-02-26 20:27:49]     "pilotErrorDiag": "",
[2026-02-26 20:27:49]  *** Listing of results directory ***
[2026-02-26 20:27:49] total 513012
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc    584627 Feb 26 01:40 pilot3.tar.gz
[2026-02-26 20:27:49] -rwx------ 1 boinc boinc     36322 Feb 26 01:45 runpilot2-wrapper.sh
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc      5111 Feb 26 01:47 queuedata.json
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc       100 Feb 26 18:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 20:27:49] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 18:40 run_atlas
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc       105 Feb 26 18:40 job.xml
[2026-02-26 20:27:49] -rw-r--r-- 2 boinc boinc 293056632 Feb 26 18:40 EVNT.48220085._000195.pool.root.1
[2026-02-26 20:27:49] drwxrwx--x 2 boinc boinc      4096 Feb 26 18:40 shared
[2026-02-26 20:27:49] -rw-r--r-- 2 boinc boinc    597963 Feb 26 18:40 input.tar.gz
[2026-02-26 20:27:49] -rw-r--r-- 2 boinc boinc     15845 Feb 26 18:40 start_atlas.sh
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc         0 Feb 26 18:40 boinc_setup_complete
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc      6198 Feb 26 18:40 init_data.xml
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc         0 Feb 26 18:40 boinc_lockfile
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc      2567 Feb 26 18:40 pandaJob.out
[2026-02-26 20:27:49] -rw------- 1 boinc boinc    998467 Feb 26 18:40 agis_schedconf.cvmfs.json
[2026-02-26 20:27:49] -rw------- 1 boinc boinc   1513015 Feb 26 18:40 agis_ddmendpoints.agis.ALL.json
[2026-02-26 20:27:49] -rw------- 1 boinc boinc       428 Feb 26 18:40 workernode_map.json
[2026-02-26 20:27:49] drwx------ 5 boinc boinc      4096 Feb 26 18:40 pilot3
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc       530 Feb 26 20:26 boinc_task_state.xml
[2026-02-26 20:27:49] -rw------- 1 boinc boinc 225946517 Feb 26 20:26 HITS.48838416._004662.pool.root.1
[2026-02-26 20:27:49] -rw------- 1 boinc boinc      1015 Feb 26 20:26 memory_monitor_summary.json
[2026-02-26 20:27:49] -rw------- 1 boinc boinc    282034 Feb 26 20:26 log.48838416._004662.job.log.tgz.1
[2026-02-26 20:27:49] -rw------- 1 boinc boinc      6327 Feb 26 20:26 heartbeat.json
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc        27 Feb 26 20:27 wrapper_checkpoint.txt
[2026-02-26 20:27:49] -rw------- 1 boinc boinc        95 Feb 26 20:27 pilot_heartbeat.json
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc      8192 Feb 26 20:27 boinc_mmap_file
[2026-02-26 20:27:49] -rw------- 1 boinc boinc      6246 Feb 26 20:27 pilotlog.txt
[2026-02-26 20:27:49] -rw------- 1 boinc boinc    921691 Feb 26 20:27 log.48838416._004662.job.log.1
[2026-02-26 20:27:49] -rw------- 1 boinc boinc       357 Feb 26 20:27 output.list
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc       620 Feb 26 20:27 runtime_log
[2026-02-26 20:27:49] -rw------- 1 boinc boinc   1218560 Feb 26 20:27 result.tar.gz
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc      8906 Feb 26 20:27 runtime_log.err
[2026-02-26 20:27:49] -rw------- 1 boinc boinc       659 Feb 26 20:27 769NDmNgeF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmem1KDmJms01n.diag
[2026-02-26 20:27:49] -rw-r--r-- 1 boinc boinc      6936 Feb 26 20:27 stderr.txt
[2026-02-26 20:27:49] HITS file was successfully produced:
[2026-02-26 20:27:49] -rw------- 1 boinc boinc 225946517 Feb 26 20:26 shared/HITS.pool.root.1
[2026-02-26 20:27:49]  *** Contents of shared directory: ***
[2026-02-26 20:27:49] total 508644
[2026-02-26 20:27:49] -rw-r--r-- 2 boinc boinc 293056632 Feb 26 18:40 ATLAS.root_0
[2026-02-26 20:27:49] -rw-r--r-- 2 boinc boinc    597963 Feb 26 18:40 input.tar.gz
[2026-02-26 20:27:49] -rw-r--r-- 2 boinc boinc     15845 Feb 26 18:40 start_atlas.sh
[2026-02-26 20:27:49] -rw------- 1 boinc boinc 225946517 Feb 26 20:26 HITS.pool.root.1
[2026-02-26 20:27:49] -rw------- 1 boinc boinc   1218560 Feb 26 20:27 result.tar.gz
20:27:50 (223090): run_atlas exited; CPU time 18446.434968
20:27:50 (223090): called boinc_finish(0)

</stderr_txt>
]]>

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