Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:15:50 (326667): wrapper (7.7.26015): starting
20:15:50 (326667): wrapper: running run_atlas (--nthreads 4)
[2026-02-26 20:15:50] Arguments: --nthreads 4
[2026-02-26 20:15:50] Threads: 4
[2026-02-26 20:15:50] Checking for CVMFS
[2026-02-26 20:15:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 20:15:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 20:15:50] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 20:15:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 20:15:50] 2.9.2.0 41054 1673 85304 156665 2 49 28401399 36864001 0 130560 0 798938 99.981 72824 10460 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-26 20:15:50] CVMFS is ok
[2026-02-26 20:15:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 20:15:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 20:15:50] Further information can be found at the LHC@home message board.
[2026-02-26 20:15:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 20:15:50] Checking for apptainer binary...
[2026-02-26 20:15:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 20:15:50] Running /usr/bin/apptainer --version
[2026-02-26 20:15:50] apptainer version 1.4.1-1.1
[2026-02-26 20:15:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 20:15:50] thA375
[2026-02-26 20:15:50] apptainer works
[2026-02-26 20:15:50] Set ATHENA_PROC_NUMBER=4
[2026-02-26 20:15:50] Set ATHENA_CORE_NUMBER=4
[2026-02-26 20:15:50] Starting ATLAS job with PandaID=7030393589
[2026-02-26 20:15:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 21:38:35]  *** The last 200 lines of the pilot log: ***
[2026-02-26 21:38:35] 2026-02-26 20:38:04,361 | INFO     | collected zombie processes
[2026-02-26 21:38:35] 2026-02-26 20:38:04,361 | INFO     | will attempt to kill all subprocesses of pid=335280
[2026-02-26 21:38:35] 2026-02-26 20:38:04,404 | INFO     | process IDs to be killed: [335280] (in reverse order)
[2026-02-26 21:38:35] 2026-02-26 20:38:04,436 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 21:38:35] 2026-02-26 20:38:04,436 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 21:38:35] 2026-02-26 20:38:04,438 | INFO     | did not find any defunct processes belonging to 335280
[2026-02-26 21:38:35] 2026-02-26 20:38:04,439 | INFO     | did not find any defunct processes belonging to 335280
[2026-02-26 21:38:35] 2026-02-26 20:38:04,439 | INFO     | ready for new job
[2026-02-26 21:38:35] 2026-02-26 20:38:04,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 21:38:35] 2026-02-26 20:38:04,440 | INFO     | **************************************
[2026-02-26 21:38:35] 2026-02-26 20:38:04,440 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 21:38:35] 2026-02-26 20:38:04,440 | INFO     | **************************************
[2026-02-26 21:38:35] 2026-02-26 20:38:04,440 | INFO     | 
[2026-02-26 21:38:35] 2026-02-26 20:38:04,440 | INFO     | architecture information:
[2026-02-26 21:38:35] 2026-02-26 20:38:04,440 | INFO     | executing command: cat /etc/os-release
[2026-02-26 21:38:35] 2026-02-26 20:38:04,454 | INFO     | cat /etc/os-release:
[2026-02-26 21:38:35] NAME="CentOS Linux"
[2026-02-26 21:38:35] VERSION="7 (Core)"
[2026-02-26 21:38:35] ID="centos"
[2026-02-26 21:38:35] ID_LIKE="rhel fedora"
[2026-02-26 21:38:35] VERSION_ID="7"
[2026-02-26 21:38:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 21:38:35] ANSI_COLOR="0;31"
[2026-02-26 21:38:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 21:38:35] HOME_URL="https://www.centos.org/"
[2026-02-26 21:38:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 21:38:35] 
[2026-02-26 21:38:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 21:38:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 21:38:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 21:38:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 21:38:35] 
[2026-02-26 21:38:35] 2026-02-26 20:38:04,454 | INFO     | **************************************
[2026-02-26 21:38:35] 2026-02-26 20:38:04,957 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-26 21:38:35] 2026-02-26 20:38:04,974 | INFO     | sufficient remaining disk space (229238636544 B)
[2026-02-26 21:38:35] 2026-02-26 20:38:04,974 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 21:38:35] 2026-02-26 20:38:04,974 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 21:38:35] 2026-02-26 20:38:04,974 | INFO     | update_server=False
[2026-02-26 21:38:35] 2026-02-26 20:38:04,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 21:38:35] 2026-02-26 20:38:04,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 21:38:35] 2026-02-26 20:38:04,974 | INFO     | aborting loop
[2026-02-26 21:38:35] 2026-02-26 20:38:04,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 21:38:35] 2026-02-26 20:38:05,507 | INFO     | all payload control threads have been joined
[2026-02-26 21:38:35] 2026-02-26 20:38:05,547 | INFO     | all data control threads have been joined
[2026-02-26 21:38:35] 2026-02-26 20:38:05,602 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 21:38:35] 2026-02-26 20:38:05,874 | INFO     | all job control threads have been joined
[2026-02-26 21:38:35] 2026-02-26 20:38:05,980 | INFO     | [job] job monitor thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:05,980 | INFO     | [job] retrieve thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:05,981 | INFO     | [job] queue monitor thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:06,337 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:06,443 | INFO     | [job] validate thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:06,513 | INFO     | [payload] control thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:06,520 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:06,551 | INFO     | [payload] failed_post thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:06,553 | INFO     | [data] control thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:06,608 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:06,779 | INFO     | [data] copytool_in thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:06,880 | INFO     | [job] control thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:07,129 | INFO     | [payload] validate_post thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:07,608 | INFO     | [data] copytool_out thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:07,935 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 21:38:35] 2026-02-26 20:38:07,950 | INFO     | [monitor] cgroup control has ended
[2026-02-26 21:38:35] 2026-02-26 20:38:11,942 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:15,191 | INFO     | job.realtimelogging is not enabled
[2026-02-26 21:38:35] 2026-02-26 20:38:16,197 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 21:38:35] 2026-02-26 20:38:17,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675362305856)>', '<ExcThread(monitor, started 139674257442560)>']
[2026-02-26 21:38:35] 2026-02-26 20:38:22,773 | INFO     | all workflow threads have been joined
[2026-02-26 21:38:35] 2026-02-26 20:38:22,774 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 21:38:35] 2026-02-26 20:38:22,774 | INFO     | traces error code: 0
[2026-02-26 21:38:35] 2026-02-26 20:38:22,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 21:38:35] 2026-02-26 20:38:35,664 | INFO     | PID=330781 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-26 21:38:35] 2026-02-26 20:38:35,664 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 21:38:35] 2026-02-26 20:38:35,664 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 21:38:35] 2026-02-26 20:38:35,664 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 21:38:35] 2026-02-26 20:38:35,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 21:38:35] 2026-02-26 20:38:35,664 | INFO     | [monitor] control thread has ended
[2026-02-26 21:38:35] 2026-02-26 20:38:35,728 [wrapper] ==== pilot stdout END ====
[2026-02-26 21:38:35] 2026-02-26 20:38:35,732 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 21:38:35] 2026-02-26 20:38:35,736 [wrapper] pilotpid: 330781
[2026-02-26 21:38:35] 2026-02-26 20:38:35,740 [wrapper] Pilot exit status: 0
[2026-02-26 21:38:35] 2026-02-26 20:38:35,751 [wrapper] pandaids: 7030393589
[2026-02-26 21:38:35] 2026-02-26 20:38:35,771 [wrapper] cleanup supervisor_pilot  340431 330782
[2026-02-26 21:38:35] 2026-02-26 20:38:35,774 [wrapper] Test setup, not cleaning
[2026-02-26 21:38:35] 2026-02-26 20:38:35,778 [wrapper] apfmon messages muted
[2026-02-26 21:38:35] 2026-02-26 20:38:35,781 [wrapper] ==== wrapper stdout END ====
[2026-02-26 21:38:35] 2026-02-26 20:38:35,784 [wrapper] ==== wrapper stderr END ====
[2026-02-26 21:38:35]  *** Error codes and diagnostics ***
[2026-02-26 21:38:35]     "exeErrorCode": 0,
[2026-02-26 21:38:35]     "exeErrorDiag": "",
[2026-02-26 21:38:35]     "pilotErrorCode": 0,
[2026-02-26 21:38:35]     "pilotErrorDiag": "",
[2026-02-26 21:38:35]  *** Listing of results directory ***
[2026-02-26 21:38:35] total 469504
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc    584627 Feb 26 00:19 pilot3.tar.gz
[2026-02-26 21:38:35] -rwx------ 1 boinc boinc     36322 Feb 26 00:21 runpilot2-wrapper.sh
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc      5111 Feb 26 00:22 queuedata.json
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc       100 Feb 26 20:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 21:38:35] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 20:15 run_atlas
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc       105 Feb 26 20:15 job.xml
[2026-02-26 21:38:35] -rw-r--r-- 2 boinc boinc 267802594 Feb 26 20:15 EVNT.48343799._000027.pool.root.1
[2026-02-26 21:38:35] -rw-r--r-- 2 boinc boinc    597964 Feb 26 20:15 input.tar.gz
[2026-02-26 21:38:35] -rw-r--r-- 2 boinc boinc     15845 Feb 26 20:15 start_atlas.sh
[2026-02-26 21:38:35] drwxrwx--x 2 boinc boinc      4096 Feb 26 20:15 shared
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc         0 Feb 26 20:15 boinc_setup_complete
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc      6369 Feb 26 20:15 init_data.xml
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc         0 Feb 26 20:15 boinc_lockfile
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc      2564 Feb 26 20:15 pandaJob.out
[2026-02-26 21:38:35] -rw------- 1 boinc boinc    997728 Feb 26 20:15 agis_schedconf.cvmfs.json
[2026-02-26 21:38:35] -rw------- 1 boinc boinc   1513015 Feb 26 20:15 agis_ddmendpoints.agis.ALL.json
[2026-02-26 21:38:35] -rw------- 1 boinc boinc       419 Feb 26 20:16 workernode_map.json
[2026-02-26 21:38:35] drwx------ 5 boinc boinc      4096 Feb 26 20:16 pilot3
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc       529 Feb 26 21:37 boinc_task_state.xml
[2026-02-26 21:38:35] -rw------- 1 boinc boinc 207088694 Feb 26 21:37 HITS.48838620._000663.pool.root.1
[2026-02-26 21:38:35] -rw------- 1 boinc boinc      1019 Feb 26 21:37 memory_monitor_summary.json
[2026-02-26 21:38:35] -rw------- 1 boinc boinc    264434 Feb 26 21:37 log.48838620._000663.job.log.tgz.1
[2026-02-26 21:38:35] -rw------- 1 boinc boinc      6308 Feb 26 21:38 heartbeat.json
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc      8192 Feb 26 21:38 boinc_mmap_file
[2026-02-26 21:38:35] -rw------- 1 boinc boinc       746 Feb 26 21:38 pilotlog.txt
[2026-02-26 21:38:35] -rw------- 1 boinc boinc        95 Feb 26 21:38 pilot_heartbeat.json
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc        27 Feb 26 21:38 wrapper_checkpoint.txt
[2026-02-26 21:38:35] -rw------- 1 boinc boinc    721013 Feb 26 21:38 log.48838620._000663.job.log.1
[2026-02-26 21:38:35] -rw------- 1 boinc boinc       357 Feb 26 21:38 output.list
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc       620 Feb 26 21:38 runtime_log
[2026-02-26 21:38:35] -rw------- 1 boinc boinc   1003520 Feb 26 21:38 result.tar.gz
[2026-02-26 21:38:35] -rw------- 1 boinc boinc       657 Feb 26 21:38 udTMDmTNdF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm7O1KDmDxToMn.diag
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc      8896 Feb 26 21:38 runtime_log.err
[2026-02-26 21:38:35] -rw-r--r-- 1 boinc boinc     10361 Feb 26 21:38 stderr.txt
[2026-02-26 21:38:35] HITS file was successfully produced:
[2026-02-26 21:38:35] -rw------- 1 boinc boinc 207088694 Feb 26 21:37 shared/HITS.pool.root.1
[2026-02-26 21:38:35]  *** Contents of shared directory: ***
[2026-02-26 21:38:35] total 465348
[2026-02-26 21:38:35] -rw-r--r-- 2 boinc boinc 267802594 Feb 26 20:15 ATLAS.root_0
[2026-02-26 21:38:35] -rw-r--r-- 2 boinc boinc    597964 Feb 26 20:15 input.tar.gz
[2026-02-26 21:38:35] -rw-r--r-- 2 boinc boinc     15845 Feb 26 20:15 start_atlas.sh
[2026-02-26 21:38:35] -rw------- 1 boinc boinc 207088694 Feb 26 21:37 HITS.pool.root.1
[2026-02-26 21:38:35] -rw------- 1 boinc boinc   1003520 Feb 26 21:38 result.tar.gz
21:38:37 (326667): run_atlas exited; CPU time 18606.133907
21:38:37 (326667): called boinc_finish(0)

</stderr_txt>
]]>

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