Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:29:11 (21205): wrapper (7.7.26015): starting
15:29:11 (21205): wrapper: running run_atlas (--nthreads 8)
[2026-02-26 15:29:11] Arguments: --nthreads 8
[2026-02-26 15:29:11] Threads: 8
[2026-02-26 15:29:11] Checking for CVMFS
[2026-02-26 15:29:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 15:29:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 15:29:14] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 15:29:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 15:29:16] 2.11.2.0 25311 104654 134556 156657 3 87 21979184 25165824 4456 130560 0 30238704 99.758 29412366 2685 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-26 15:29:16] CVMFS is ok
[2026-02-26 15:29:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 15:29:16] Checking for apptainer binary...
[2026-02-26 15:29:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 15:29:16] Running /usr/bin/apptainer --version
[2026-02-26 15:29:16] apptainer version 1.3.2-1.el7
[2026-02-26 15:29:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 15:29:37] cg-vwn420.simple-grid.lan
[2026-02-26 15:29:37] apptainer works
[2026-02-26 15:29:37] Set ATHENA_PROC_NUMBER=8
[2026-02-26 15:29:37] Set ATHENA_CORE_NUMBER=8
[2026-02-26 15:29:37] Starting ATLAS job with PandaID=7030393719
[2026-02-26 15:29:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 20:20:18]  *** The last 200 lines of the pilot log: ***
[2026-02-26 20:20:18] 2026-02-26 19:19:24,450 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7030393719/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 20:20:18] 2026-02-26 19:19:24,451 | INFO     | extracted standard info from prmon json
[2026-02-26 20:20:18] 2026-02-26 19:19:24,451 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 20:20:18] 2026-02-26 19:19:24,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 20:20:18] 2026-02-26 19:19:24,452 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 20:20:18] 2026-02-26 19:19:24,452 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 20:20:18] 2026-02-26 19:19:24,457 | INFO     | fitting pss+swap vs Time
[2026-02-26 20:20:18] 2026-02-26 19:19:24,458 | INFO     | sum of square deviations: 6519285025.0
[2026-02-26 20:20:18] 2026-02-26 19:19:24,461 | INFO     | sum of deviations: 117043169554.49998
[2026-02-26 20:20:18] 2026-02-26 19:19:24,461 | INFO     | mean x: 1772125119.5
[2026-02-26 20:20:18] 2026-02-26 19:19:24,461 | INFO     | mean y: 2475052.677536232
[2026-02-26 20:20:18] 2026-02-26 19:19:24,461 | INFO     | intersect: -31813151973.6047
[2026-02-26 20:20:18] 2026-02-26 19:19:24,462 | INFO     | chi2: 5.60576503663262
[2026-02-26 20:20:18] 2026-02-26 19:19:24,462 | INFO     | sum of square deviations: 6171352920.0
[2026-02-26 20:20:18] 2026-02-26 19:19:24,465 | INFO     | sum of deviations: 114832462424.00002
[2026-02-26 20:20:18] 2026-02-26 19:19:24,465 | INFO     | mean x: 1772124967.0
[2026-02-26 20:20:18] 2026-02-26 19:19:24,465 | INFO     | mean y: 2474083.258302583
[2026-02-26 20:20:18] 2026-02-26 19:19:24,465 | INFO     | intersect: -32972057809.767803
[2026-02-26 20:20:18] 2026-02-26 19:19:24,465 | INFO     | chi2: 5.612609622131519
[2026-02-26 20:20:18] 2026-02-26 19:19:24,466 | INFO     | current chi2=5.612609622131519 (change=-0.12209904364828433 %)
[2026-02-26 20:20:18] 2026-02-26 19:19:24,466 | INFO     | right removable region: 270
[2026-02-26 20:20:18] 2026-02-26 19:19:24,466 | INFO     | sum of square deviations: 6171352920.0
[2026-02-26 20:20:18] 2026-02-26 19:19:24,469 | INFO     | sum of deviations: 21059449862.999992
[2026-02-26 20:20:18] 2026-02-26 19:19:24,469 | INFO     | mean x: 1772125272.0
[2026-02-26 20:20:18] 2026-02-26 19:19:24,469 | INFO     | mean y: 2517087.5129151293
[2026-02-26 20:20:18] 2026-02-26 19:19:24,469 | INFO     | intersect: -6044776561.128269
[2026-02-26 20:20:18] 2026-02-26 19:19:24,470 | INFO     | chi2: 0.9443464931378608
[2026-02-26 20:20:18] 2026-02-26 19:19:24,470 | INFO     | current chi2=0.9443464931378608 (change=83.1540122183728 %)
[2026-02-26 20:20:18] 2026-02-26 19:19:24,470 | INFO     | sum of square deviations: 5836025702.5
[2026-02-26 20:20:18] 2026-02-26 19:19:24,473 | INFO     | sum of deviations: -13244012987.000004
[2026-02-26 20:20:18] 2026-02-26 19:19:24,473 | INFO     | mean x: 1772125424.5
[2026-02-26 20:20:18] 2026-02-26 19:19:24,473 | INFO     | mean y: 2532579.5488721803
[2026-02-26 20:20:18] 2026-02-26 19:19:24,473 | INFO     | intersect: 4024113931.840885
[2026-02-26 20:20:18] 2026-02-26 19:19:24,474 | INFO     | chi2: 0.1087468832459457
[2026-02-26 20:20:18] 2026-02-26 19:19:24,474 | INFO     | current chi2=0.1087468832459457 (change=88.48442981086284 %)
[2026-02-26 20:20:18] 2026-02-26 19:19:24,474 | INFO     | sum of square deviations: 5513070810.0
[2026-02-26 20:20:18] 2026-02-26 19:19:24,476 | INFO     | sum of deviations: -10829745532.0
[2026-02-26 20:20:18] 2026-02-26 19:19:24,477 | INFO     | mean x: 1772125577.0
[2026-02-26 20:20:18] 2026-02-26 19:19:24,477 | INFO     | mean y: 2531413.6475095786
[2026-02-26 20:20:18] 2026-02-26 19:19:24,477 | INFO     | intersect: 3483652863.211962
[2026-02-26 20:20:18] 2026-02-26 19:19:24,477 | INFO     | chi2: 0.09210467870041257
[2026-02-26 20:20:18] 2026-02-26 19:19:24,478 | INFO     | current chi2=0.09210467870041257 (change=15.30361519225755 %)
[2026-02-26 20:20:18] 2026-02-26 19:19:24,478 | INFO     | left removable region: 30
[2026-02-26 20:20:18] 2026-02-26 19:19:24,478 | INFO     | sum of square deviations: 4286517580.0
[2026-02-26 20:20:18] 2026-02-26 19:19:24,480 | INFO     | sum of deviations: 7710532919.0
[2026-02-26 20:20:18] 2026-02-26 19:19:24,480 | INFO     | mean x: 1772125851.5
[2026-02-26 20:20:18] 2026-02-26 19:19:24,480 | INFO     | mean y: 2521829.7416666667
[2026-02-26 20:20:18] 2026-02-26 19:19:24,480 | INFO     | intersect: -3185155453.644549
[2026-02-26 20:20:18] 2026-02-26 19:19:24,481 | INFO     | chi2: 0.0004969796889895379
[2026-02-26 20:20:18] 2026-02-26 19:19:24,481 | INFO     | current memory leak: 1.80 B/s (using 240 data points, chi2=0.00)
[2026-02-26 20:20:18] 2026-02-26 19:19:24,482 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-02-26 20:20:18] 2026-02-26 19:19:24,482 | INFO     | ..............................
[2026-02-26 20:20:18] 2026-02-26 19:19:24,482 | INFO     | . Timing measurements:
[2026-02-26 20:20:18] 2026-02-26 19:19:24,482 | INFO     | . get job = 0 s
[2026-02-26 20:20:18] 2026-02-26 19:19:24,482 | INFO     | . initial setup = 99 s
[2026-02-26 20:20:18] 2026-02-26 19:19:24,482 | INFO     | . payload setup = 133 s
[2026-02-26 20:20:18] 2026-02-26 19:19:24,482 | INFO     | . stage-in = 0 s
[2026-02-26 20:20:18] 2026-02-26 19:19:24,483 | INFO     | . payload execution = 16941 s
[2026-02-26 20:20:18] 2026-02-26 19:19:24,483 | INFO     | . stage-out = 3 s
[2026-02-26 20:20:18] 2026-02-26 19:19:24,483 | INFO     | . log creation = 1 s
[2026-02-26 20:20:18] 2026-02-26 19:19:24,483 | INFO     | ..............................
[2026-02-26 20:20:18] 2026-02-26 19:19:25,063 | INFO     | 
[2026-02-26 20:20:18] 2026-02-26 19:19:25,063 | INFO     | job summary report
[2026-02-26 20:20:18] 2026-02-26 19:19:25,063 | INFO     | --------------------------------------------------
[2026-02-26 20:20:18] 2026-02-26 19:19:25,063 | INFO     | PanDA job id: 7030393719
[2026-02-26 20:20:18] 2026-02-26 19:19:25,063 | INFO     | task id: 48838620
[2026-02-26 20:20:18] 2026-02-26 19:19:25,063 | INFO     | errors: (none)
[2026-02-26 20:20:18] 2026-02-26 19:19:25,063 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 20:20:18] 2026-02-26 19:19:25,064 | INFO     | pilot state: finished 
[2026-02-26 20:20:18] 2026-02-26 19:19:25,064 | INFO     | transexitcode: 0
[2026-02-26 20:20:18] 2026-02-26 19:19:25,064 | INFO     | exeerrorcode: 0
[2026-02-26 20:20:18] 2026-02-26 19:19:25,064 | INFO     | exeerrordiag: 
[2026-02-26 20:20:18] 2026-02-26 19:19:25,064 | INFO     | exitcode: 0
[2026-02-26 20:20:18] 2026-02-26 19:19:25,064 | INFO     | exitmsg: OK
[2026-02-26 20:20:18] 2026-02-26 19:19:25,064 | INFO     | cpuconsumptiontime: 62948 s
[2026-02-26 20:20:18] 2026-02-26 19:19:25,064 | INFO     | nevents: 400
[2026-02-26 20:20:18] 2026-02-26 19:19:25,064 | INFO     | neventsw: 0
[2026-02-26 20:20:18] 2026-02-26 19:19:25,065 | INFO     | pid: 29917
[2026-02-26 20:20:18] 2026-02-26 19:19:25,065 | INFO     | pgrp: 29917
[2026-02-26 20:20:18] 2026-02-26 19:19:25,065 | INFO     | corecount: 8
[2026-02-26 20:20:18] 2026-02-26 19:19:25,065 | INFO     | event service: False
[2026-02-26 20:20:18] 2026-02-26 19:19:25,065 | INFO     | sizes: {0: 2281840, 1: 2282301, 17079: 2314107, 17083: 2323105, 17085: 2323189, 17086: 2323383}
[2026-02-26 20:20:18] 2026-02-26 19:19:25,065 | INFO     | --------------------------------------------------
[2026-02-26 20:20:18] 2026-02-26 19:19:25,065 | INFO     | 
[2026-02-26 20:20:18] 2026-02-26 19:19:25,065 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-02-26 20:20:18] 2026-02-26 19:19:25,285 | INFO     | time since job start (17088s) is within the limit (349056.0s)
[2026-02-26 20:20:18] 2026-02-26 19:19:25,481 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,481 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,482 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,482 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,482 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,483 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,483 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,483 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,483 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,483 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 20:20:18] 2026-02-26 19:19:25,483 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,483 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 20:20:18] 2026-02-26 19:19:25,484 | INFO     | job 7030393719 has completed (purged errors)
[2026-02-26 20:20:18] 2026-02-26 19:19:25,484 | INFO     | overall cleanup function is called
[2026-02-26 20:20:18] 2026-02-26 19:19:26,425 | INFO     | PID=25396 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-26 20:20:18] 2026-02-26 19:19:26,425 | INFO     | .. there are 9 such processes running
[2026-02-26 20:20:18] 2026-02-26 19:19:26,497 | INFO     | --- collectZombieJob: --- 10, [29917]
[2026-02-26 20:20:18] 2026-02-26 19:19:26,497 | INFO     | zombie collector waiting for pid 29917
[2026-02-26 20:20:18] 2026-02-26 19:19:26,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 20:20:18] 2026-02-26 19:19:26,497 | INFO     | collected zombie processes
[2026-02-26 20:20:18] 2026-02-26 19:19:26,497 | INFO     | will attempt to kill all subprocesses of pid=29917
[2026-02-26 20:20:18] 2026-02-26 19:19:26,598 | INFO     | process IDs to be killed: [29917] (in reverse order)
[2026-02-26 20:20:18] 2026-02-26 19:19:27,098 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 20:20:18] 2026-02-26 19:19:27,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 20:20:18] 2026-02-26 19:19:27,102 | INFO     | did not find any defunct processes belonging to 29917
[2026-02-26 20:20:18] 2026-02-26 19:19:27,105 | INFO     | did not find any defunct processes belonging to 29917
[2026-02-26 20:20:18] 2026-02-26 19:19:27,105 | INFO     | ready for new job
[2026-02-26 20:20:18] 2026-02-26 19:19:27,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 20:20:18] 2026-02-26 19:19:27,107 | INFO     | **************************************
[2026-02-26 20:20:18] 2026-02-26 19:19:27,108 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 20:20:18] 2026-02-26 19:19:27,108 | INFO     | **************************************
[2026-02-26 20:20:18] 2026-02-26 19:19:27,108 | INFO     | 
[2026-02-26 20:20:18] 2026-02-26 19:19:27,109 | INFO     | pilot is running in a VM
[2026-02-26 20:20:18] 2026-02-26 19:19:27,109 | INFO     | architecture information:
[2026-02-26 20:20:18] 2026-02-26 19:19:27,111 | INFO     | executing command: cat /etc/os-release
[2026-02-26 20:20:18] 2026-02-26 19:19:27,273 | INFO     | cat /etc/os-release:
[2026-02-26 20:20:18] NAME="CentOS Linux"
[2026-02-26 20:20:18] VERSION="7 (Core)"
[2026-02-26 20:20:18] ID="centos"
[2026-02-26 20:20:18] ID_LIKE="rhel fedora"
[2026-02-26 20:20:18] VERSION_ID="7"
[2026-02-26 20:20:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 20:20:18] ANSI_COLOR="0;31"
[2026-02-26 20:20:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 20:20:18] HOME_URL="https://www.centos.org/"
[2026-02-26 20:20:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 20:20:18] 
[2026-02-26 20:20:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 20:20:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 20:20:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 20:20:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 20:20:18] 
[2026-02-26 20:20:18] 2026-02-26 19:19:27,274 | INFO     | **************************************
[2026-02-26 20:20:18] 2026-02-26 19:19:27,777 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-02-26 20:20:18] 2026-02-26 19:19:27,846 | INFO     | sufficient remaining disk space (496099131392 B)
[2026-02-26 20:20:18] 2026-02-26 19:19:27,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 20:20:18] 2026-02-26 19:19:27,847 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 20:20:18] 2026-02-26 19:19:27,847 | INFO     | update_server=False
[2026-02-26 20:20:18] 2026-02-26 19:19:27,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 20:20:18] 2026-02-26 19:19:27,848 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 20:20:18] 2026-02-26 19:19:28,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 20:20:18] 2026-02-26 19:19:28,002 | INFO     | aborting loop
[2026-02-26 20:20:18] 2026-02-26 19:19:28,096 | INFO     | all payload control threads have been joined
[2026-02-26 20:20:18] 2026-02-26 19:19:28,149 | INFO     | all job control threads have been joined
[2026-02-26 20:20:18] 2026-02-26 19:19:28,510 | INFO     | all data control threads have been joined
[2026-02-26 20:20:18] 2026-02-26 19:19:28,853 | INFO     | [job] retrieve thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:28,892 | INFO     | [payload] validate_post thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:29,007 | INFO     | [job] job monitor thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:29,102 | INFO     | [payload] control thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:29,125 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:29,155 | INFO     | [job] control thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:29,365 | INFO     | [payload] failed_post thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:29,516 | INFO     | [data] control thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:29,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 20:20:18] 2026-02-26 19:19:29,656 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:29,713 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:29,777 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:29,855 | INFO     | [data] copytool_out thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:30,094 | INFO     | [data] copytool_in thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:30,324 | INFO     | [job] validate thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:30,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 20:20:18] 2026-02-26 19:19:30,635 | INFO     | [job] queue monitor thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:34,462 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 20:20:18] 2026-02-26 19:19:58,647 | INFO     | PID=25396 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-26 20:20:18] 2026-02-26 19:19:58,648 | INFO     | .. there are 9 such processes running
[2026-02-26 20:20:18] 2026-02-26 19:19:58,649 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 20:20:18] 2026-02-26 19:19:58,650 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 20:20:18] 2026-02-26 19:19:58,650 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 20:20:18] 2026-02-26 19:20:06,511 | INFO     | [monitor] cgroup control has ended
[2026-02-26 20:20:18] 2026-02-26 19:20:08,265 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139934423316288)>', '<ExcThread(monitor, started 139934204991232)>']
[2026-02-26 20:20:18] 2026-02-26 19:20:08,710 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 20:20:18] 2026-02-26 19:20:08,710 | INFO     | [monitor] control thread has ended
[2026-02-26 20:20:18] 2026-02-26 19:20:13,291 | INFO     | all workflow threads have been joined
[2026-02-26 20:20:18] 2026-02-26 19:20:13,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 20:20:18] 2026-02-26 19:20:13,291 | INFO     | traces error code: 0
[2026-02-26 20:20:18] 2026-02-26 19:20:13,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 20:20:18] 2026-02-26 19:20:13,540 [wrapper] ==== pilot stdout END ====
[2026-02-26 20:20:18] 2026-02-26 19:20:13,623 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 20:20:18] 2026-02-26 19:20:13,714 [wrapper] pilotpid: 25396
[2026-02-26 20:20:18] 2026-02-26 19:20:13,828 [wrapper] Pilot exit status: 0
[2026-02-26 20:20:18] 2026-02-26 19:20:14,198 [wrapper] pandaids: 7030393719
[2026-02-26 20:20:18] 2026-02-26 19:20:14,846 [wrapper] cleanup supervisor_pilot 23966 25397
[2026-02-26 20:20:18] 2026-02-26 19:20:14,919 [wrapper] Test setup, not cleaning
[2026-02-26 20:20:18] 2026-02-26 19:20:14,981 [wrapper] apfmon messages muted
[2026-02-26 20:20:18] 2026-02-26 19:20:15,117 [wrapper] ==== wrapper stdout END ====
[2026-02-26 20:20:18] 2026-02-26 19:20:15,205 [wrapper] ==== wrapper stderr END ====
[2026-02-26 20:20:18]  *** Error codes and diagnostics ***
[2026-02-26 20:20:18]     "exeErrorCode": 0,
[2026-02-26 20:20:18]     "exeErrorDiag": "",
[2026-02-26 20:20:18]     "pilotErrorCode": 0,
[2026-02-26 20:20:18]     "pilotErrorDiag": "",
[2026-02-26 20:20:18]  *** Listing of results directory ***
[2026-02-26 20:20:18] total 474332
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc    584627 Feb 26 00:19 pilot3.tar.gz
[2026-02-26 20:20:18] -rwx------. 1 boinc boinc     36322 Feb 26 00:24 runpilot2-wrapper.sh
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc      5111 Feb 26 00:26 queuedata.json
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc       100 Feb 26 15:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 20:20:18] -rwxr-xr-x. 1 boinc boinc      7986 Feb 26 15:29 run_atlas
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc       105 Feb 26 15:29 job.xml
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc      6391 Feb 26 15:29 init_data.xml
[2026-02-26 20:20:18] -rw-r--r--. 2 boinc boinc 274271688 Feb 26 15:29 EVNT.48343799._000032.pool.root.1
[2026-02-26 20:20:18] -rw-r--r--. 2 boinc boinc     15845 Feb 26 15:29 start_atlas.sh
[2026-02-26 20:20:18] drwxrwx--x. 2 boinc boinc        68 Feb 26 15:29 shared
[2026-02-26 20:20:18] -rw-r--r--. 2 boinc boinc    597975 Feb 26 15:29 input.tar.gz
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc         0 Feb 26 15:29 boinc_lockfile
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc      2564 Feb 26 15:29 pandaJob.out
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc       415 Feb 26 15:34 workernode_map.json
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc    998415 Feb 26 15:34 agis_schedconf.cvmfs.json
[2026-02-26 20:20:18] drwx------. 5 boinc boinc      4096 Feb 26 15:34 pilot3
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc 201767293 Feb 26 20:18 HITS.48838620._000793.pool.root.1
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc       530 Feb 26 20:19 boinc_task_state.xml
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc      1015 Feb 26 20:19 memory_monitor_summary.json
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc   1513015 Feb 26 20:19 agis_ddmendpoints.agis.ALL.json
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc    506000 Feb 26 20:19 log.48838620._000793.job.log.tgz.1
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc      6315 Feb 26 20:19 heartbeat.json
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc        95 Feb 26 20:19 pilot_heartbeat.json
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc      8192 Feb 26 20:20 boinc_mmap_file
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc        28 Feb 26 20:20 wrapper_checkpoint.txt
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc      4880 Feb 26 20:20 pilotlog.txt
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc   2376078 Feb 26 20:20 log.48838620._000793.job.log.1
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc       357 Feb 26 20:20 output.list
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc       620 Feb 26 20:20 runtime_log
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc   2897920 Feb 26 20:20 result.tar.gz
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc      8816 Feb 26 20:20 runtime_log.err
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc       655 Feb 26 20:20 fcBMDmyPdF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmtY1KDmhAU4To.diag
[2026-02-26 20:20:18] -rw-r--r--. 1 boinc boinc     20809 Feb 26 20:20 stderr.txt
[2026-02-26 20:20:18] HITS file was successfully produced:
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc 201767293 Feb 26 20:18 shared/HITS.pool.root.1
[2026-02-26 20:20:18]  *** Contents of shared directory: ***
[2026-02-26 20:20:18] total 468316
[2026-02-26 20:20:18] -rw-r--r--. 2 boinc boinc 274271688 Feb 26 15:29 ATLAS.root_0
[2026-02-26 20:20:18] -rw-r--r--. 2 boinc boinc     15845 Feb 26 15:29 start_atlas.sh
[2026-02-26 20:20:18] -rw-r--r--. 2 boinc boinc    597975 Feb 26 15:29 input.tar.gz
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc 201767293 Feb 26 20:18 HITS.pool.root.1
[2026-02-26 20:20:18] -rw-------. 1 boinc boinc   2897920 Feb 26 20:20 result.tar.gz
20:20:20 (21205): run_atlas exited; CPU time 63209.527355
20:20:20 (21205): called boinc_finish(0)

</stderr_txt>
]]>

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