Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
21:21:23 (561719): wrapper (7.7.26015): starting
21:21:23 (561719): wrapper: running run_atlas (--nthreads 8)
[2026-02-25 21:21:23] Arguments: --nthreads 8
[2026-02-25 21:21:23] Threads: 8
[2026-02-25 21:21:23] Checking for CVMFS
[2026-02-25 21:21:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-25 21:21:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-25 21:21:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-25 21:21:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-25 21:21:23] 2.13.3.0 31667 456 49888 156642 1 58 1712096 20480001 1940 130560 0 1536422 99.626 566685 262 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-25 21:21:23] CVMFS is ok
[2026-02-25 21:21:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-25 21:21:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-25 21:21:23] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-25 21:21:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-25 21:21:23] Further information can be found at the LHC@home message board.
[2026-02-25 21:21:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-25 21:21:23] Checking for apptainer binary...
[2026-02-25 21:21:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-25 21:21:23] Running /usr/bin/apptainer --version
[2026-02-25 21:21:23] apptainer version 1.4.5
[2026-02-25 21:21:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-25 21:21:23] X670EPG
[2026-02-25 21:21:23] apptainer works
[2026-02-25 21:21:23] Set ATHENA_PROC_NUMBER=8
[2026-02-25 21:21:23] Set ATHENA_CORE_NUMBER=8
[2026-02-25 21:21:23] Starting ATLAS job with PandaID=7030393070
[2026-02-25 21:21:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-25 22:13:42]  *** The last 200 lines of the pilot log: ***
[2026-02-25 22:13:42]  is_altstaged=None
[2026-02-25 22:13:42]  is_tar=False
[2026-02-25 22:13:42]  lfn=log.48841707._000192.job.log.tgz.1
[2026-02-25 22:13:42]  mtime=0
[2026-02-25 22:13:42]  protocol_id=None
[2026-02-25 22:13:42]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-25 22:13:42]  replicas=None
[2026-02-25 22:13:42]  scope=mc23_13p6TeV
[2026-02-25 22:13:42]  status=None
[2026-02-25 22:13:42]  status_code=0
[2026-02-25 22:13:42]  storage_token=
[2026-02-25 22:13:42]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-7030393070/log.48841707._000192.job.log.tgz.1
[2026-02-25 22:13:42]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/ef/log.48841707._000192.job.log.tgz.1
[2026-02-25 22:13:42]  workdir=None
[2026-02-25 22:13:42] ]
[2026-02-25 22:13:42] 2026-02-26 05:12:39,210 | INFO     | transferring file log.48841707._000192.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-7030393070/log.48841707._000192.job.log.tgz.1 to /var/lib/boinc
[2026-02-25 22:13:42] 2026-02-26 05:12:39,210 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-7030393070/log.48841707._000192.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.488417
[2026-02-25 22:13:42] 2026-02-26 05:12:39,220 | INFO     | adding to output.list: log.48841707._000192.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/63/ef/log.48841707._000192.job.log.tg
[2026-02-25 22:13:42] 2026-02-26 05:12:39,220 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-25 22:13:42] 2026-02-26 05:12:39,221 | INFO     | summary of transferred files:
[2026-02-25 22:13:42] 2026-02-26 05:12:39,221 | INFO     |  -- lfn=log.48841707._000192.job.log.tgz.1, status_code=0, status=transferred
[2026-02-25 22:13:42] 2026-02-26 05:12:39,221 | INFO     | stage-out finished correctly
[2026-02-25 22:13:42] 2026-02-26 05:12:40,268 | INFO     | monitor loop #237: job 0:7030393070 is in state 'finished'
[2026-02-25 22:13:42] 2026-02-26 05:12:40,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-25 22:13:42] 2026-02-26 05:12:40,771 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-25 22:13:42] 2026-02-26 05:12:41,080 | INFO     | time since job start (3069s) is within the limit (349056.0s)
[2026-02-25 22:13:42] 2026-02-26 05:12:42,771 | INFO     | monitor loop #238: job 0:7030393070 is in state 'finished'
[2026-02-25 22:13:42] 2026-02-26 05:12:42,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-25 22:13:42] 2026-02-26 05:12:42,858 | INFO     | job 7030393070 has state=finished
[2026-02-25 22:13:42] 2026-02-26 05:12:42,859 | INFO     | preparing for final server update for job 7030393070 in state='finished'
[2026-02-25 22:13:42] 2026-02-26 05:12:42,859 | INFO     | reading metadata from: /var/lib/boinc-client/slots/2/PanDA_Pilot-7030393070/jobReport.json
[2026-02-25 22:13:42] 2026-02-26 05:12:42,860 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/2/workernode_map.json
[2026-02-25 22:13:42] 2026-02-26 05:12:42,860 | INFO     | this job has now completed (state=finished)
[2026-02-25 22:13:42] 2026-02-26 05:12:42,860 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-25 22:13:42] 2026-02-26 05:12:42,860 | INFO     | log transfer has been attempted: DONE
[2026-02-25 22:13:42] 2026-02-26 05:12:42,860 | INFO     | job 7030393070 has finished - writing final server update
[2026-02-25 22:13:42] 2026-02-26 05:12:42,860 | INFO     | total number of processed events: 400 (read)
[2026-02-25 22:13:42] 2026-02-26 05:12:42,863 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-7030393070/memory_monitor_summary.json (trf name=prmon)
[2026-02-25 22:13:42] 2026-02-26 05:12:42,863 | INFO     | extracted standard info from prmon json
[2026-02-25 22:13:42] 2026-02-26 05:12:42,863 | INFO     | extracted standard memory fields from prmon json
[2026-02-25 22:13:42] 2026-02-26 05:12:42,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-25 22:13:42] 2026-02-26 05:12:42,863 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 22:13:42] 2026-02-26 05:12:42,863 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 22:13:42] 2026-02-26 05:12:42,864 | INFO     | fitting pss+swap vs Time
[2026-02-25 22:13:42] 2026-02-26 05:12:42,864 | INFO     | sum of square deviations: 24640462.0
[2026-02-25 22:13:42] 2026-02-26 05:12:42,864 | INFO     | sum of deviations: 393187639.0
[2026-02-25 22:13:42] 2026-02-26 05:12:42,864 | INFO     | mean x: 1772081294.0
[2026-02-25 22:13:42] 2026-02-26 05:12:42,864 | INFO     | mean y: 2661437.976744186
[2026-02-25 22:13:42] 2026-02-26 05:12:42,864 | INFO     | intersect: -28274424442.3093
[2026-02-25 22:13:42] 2026-02-26 05:12:42,864 | INFO     | chi2: 0.000336022641659537
[2026-02-25 22:13:42] 2026-02-26 05:12:42,864 | INFO     | current memory leak: 15.96 B/s (using 43 data points, chi2=0.00)
[2026-02-25 22:13:42] 2026-02-26 05:12:42,864 | INFO     | could have reported an average CPU frequency of 4574 MHz (5 samples)
[2026-02-25 22:13:42] 2026-02-26 05:12:42,864 | INFO     | ..............................
[2026-02-25 22:13:42] 2026-02-26 05:12:42,865 | INFO     | . Timing measurements:
[2026-02-25 22:13:42] 2026-02-26 05:12:42,865 | INFO     | . get job = 0 s
[2026-02-25 22:13:42] 2026-02-26 05:12:42,865 | INFO     | . initial setup = 4 s
[2026-02-25 22:13:42] 2026-02-26 05:12:42,865 | INFO     | . payload setup = 2 s
[2026-02-25 22:13:42] 2026-02-26 05:12:42,865 | INFO     | . stage-in = 0 s
[2026-02-25 22:13:42] 2026-02-26 05:12:42,865 | INFO     | . payload execution = 3048 s
[2026-02-25 22:13:42] 2026-02-26 05:12:42,865 | INFO     | . stage-out = 0 s
[2026-02-25 22:13:42] 2026-02-26 05:12:42,865 | INFO     | . log creation = 0 s
[2026-02-25 22:13:42] 2026-02-26 05:12:42,865 | INFO     | ..............................
[2026-02-25 22:13:42] 2026-02-26 05:12:43,086 | INFO     | time since job start (3071s) is within the limit (349056.0s)
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | 
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | job summary report
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | --------------------------------------------------
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | PanDA job id: 7030393070
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | task id: 48841707
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | errors: (none)
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | pilot state: finished 
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | transexitcode: 0
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | exeerrorcode: 0
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | exeerrordiag: 
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | exitcode: 0
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | exitmsg: OK
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | cpuconsumptiontime: 23153 s
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | nevents: 400
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | neventsw: 0
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | pid: 577610
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | pgrp: 577610
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | corecount: 8
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | event service: False
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | sizes: {0: 2282175, 11: 2282175, 3054: 2307644, 3056: 2316656, 3057: 2316712, 3059: 2316938}
[2026-02-25 22:13:42] 2026-02-26 05:12:43,138 | INFO     | --------------------------------------------------
[2026-02-25 22:13:42] 2026-02-26 05:12:43,139 | INFO     | 
[2026-02-25 22:13:42] 2026-02-26 05:12:43,139 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,151 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-25 22:13:42] 2026-02-26 05:12:43,152 | INFO     | job 7030393070 has completed (purged errors)
[2026-02-25 22:13:42] 2026-02-26 05:12:43,152 | INFO     | overall cleanup function is called
[2026-02-25 22:13:42] 2026-02-26 05:12:44,158 | INFO     | --- collectZombieJob: --- 10, [577610]
[2026-02-25 22:13:42] 2026-02-26 05:12:44,158 | INFO     | zombie collector waiting for pid 577610
[2026-02-25 22:13:42] 2026-02-26 05:12:44,158 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-25 22:13:42] 2026-02-26 05:12:44,158 | INFO     | collected zombie processes
[2026-02-25 22:13:42] 2026-02-26 05:12:44,158 | INFO     | will attempt to kill all subprocesses of pid=577610
[2026-02-25 22:13:42] 2026-02-26 05:12:44,233 | INFO     | process IDs to be killed: [577610] (in reverse order)
[2026-02-25 22:13:42] 2026-02-26 05:12:44,266 | WARNING  | found no corresponding commands to process id(s)
[2026-02-25 22:13:42] 2026-02-26 05:12:44,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-25 22:13:42] 2026-02-26 05:12:44,269 | INFO     | did not find any defunct processes belonging to 577610
[2026-02-25 22:13:42] 2026-02-26 05:12:44,271 | INFO     | did not find any defunct processes belonging to 577610
[2026-02-25 22:13:42] 2026-02-26 05:12:44,271 | INFO     | ready for new job
[2026-02-25 22:13:42] 2026-02-26 05:12:44,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-25 22:13:42] 2026-02-26 05:12:44,272 | INFO     | **************************************
[2026-02-25 22:13:42] 2026-02-26 05:12:44,272 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-25 22:13:42] 2026-02-26 05:12:44,272 | INFO     | **************************************
[2026-02-25 22:13:42] 2026-02-26 05:12:44,272 | INFO     | 
[2026-02-25 22:13:42] 2026-02-26 05:12:44,273 | INFO     | architecture information:
[2026-02-25 22:13:42] 2026-02-26 05:12:44,273 | INFO     | executing command: cat /etc/os-release
[2026-02-25 22:13:42] 2026-02-26 05:12:44,279 | INFO     | cat /etc/os-release:
[2026-02-25 22:13:42] NAME="CentOS Linux"
[2026-02-25 22:13:42] VERSION="7 (Core)"
[2026-02-25 22:13:42] ID="centos"
[2026-02-25 22:13:42] ID_LIKE="rhel fedora"
[2026-02-25 22:13:42] VERSION_ID="7"
[2026-02-25 22:13:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-25 22:13:42] ANSI_COLOR="0;31"
[2026-02-25 22:13:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-25 22:13:42] HOME_URL="https://www.centos.org/"
[2026-02-25 22:13:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-25 22:13:42] 
[2026-02-25 22:13:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-25 22:13:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-25 22:13:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-25 22:13:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-25 22:13:42] 
[2026-02-25 22:13:42] 2026-02-26 05:12:44,280 | INFO     | **************************************
[2026-02-25 22:13:42] 2026-02-26 05:12:44,782 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2026-02-25 22:13:42] 2026-02-26 05:12:44,790 | INFO     | sufficient remaining disk space (422436667392 B)
[2026-02-25 22:13:42] 2026-02-26 05:12:44,791 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-25 22:13:42] 2026-02-26 05:12:44,791 | INFO     | current server update state: UPDATING_FINAL
[2026-02-25 22:13:42] 2026-02-26 05:12:44,791 | INFO     | update_server=False
[2026-02-25 22:13:42] 2026-02-26 05:12:44,791 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-25 22:13:42] 2026-02-26 05:12:44,791 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-25 22:13:42] 2026-02-26 05:12:44,791 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-25 22:13:42] 2026-02-26 05:12:44,791 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-25 22:13:42] 2026-02-26 05:12:44,791 | INFO     | found 0 job(s) in 20 queues
[2026-02-25 22:13:42] 2026-02-26 05:12:44,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-25 22:13:42] 2026-02-26 05:12:44,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-25 22:13:42] 2026-02-26 05:12:44,816 | INFO     | all payload control threads have been joined
[2026-02-25 22:13:42] 2026-02-26 05:12:45,274 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-25 22:13:42] 2026-02-26 05:12:45,274 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-25 22:13:42] 2026-02-26 05:12:45,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-25 22:13:42] 2026-02-26 05:12:45,274 | INFO     | will abort loop
[2026-02-25 22:13:42] 2026-02-26 05:12:45,308 | INFO     | all data control threads have been joined
[2026-02-25 22:13:42] 2026-02-26 05:12:45,542 | INFO     | all job control threads have been joined
[2026-02-25 22:13:42] 2026-02-26 05:12:45,796 | INFO     | [job] retrieve thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:45,796 | INFO     | [job] create_data_payload thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:45,796 | INFO     | [job] queue monitor thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:45,821 | INFO     | [payload] control thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:45,921 | INFO     | [payload] validate_pre thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:45,997 | INFO     | [data] copytool_in thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:46,258 | INFO     | [payload] failed_post thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:46,279 | INFO     | [job] job monitor thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:46,313 | INFO     | [data] control thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:46,548 | INFO     | [job] control thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:46,732 | INFO     | [payload] validate_post thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:46,796 | INFO     | [data] copytool_out thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:46,813 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-25 22:13:42] 2026-02-26 05:12:47,218 | INFO     | [payload] execute_payloads thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:47,244 | INFO     | [job] validate thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:50,818 | INFO     | [data] queue_monitor thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:12:55,680 | INFO     | job.realtimelogging is not enabled
[2026-02-25 22:13:42] 2026-02-26 05:12:56,681 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-25 22:13:42] 2026-02-26 05:13:37,014 | INFO     | [monitor] cgroup control has ended
[2026-02-25 22:13:42] 2026-02-26 05:13:37,127 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137426858104640)>', '<ExcThread(monitor, started 137426370541312)>']
[2026-02-25 22:13:42] 2026-02-26 05:13:38,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-25 22:13:42] 2026-02-26 05:13:38,042 | INFO     | [monitor] control thread has ended
[2026-02-25 22:13:42] 2026-02-26 05:13:42,153 | INFO     | all workflow threads have been joined
[2026-02-25 22:13:42] 2026-02-26 05:13:42,153 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-25 22:13:42] 2026-02-26 05:13:42,153 | INFO     | traces error code: 0
[2026-02-25 22:13:42] 2026-02-26 05:13:42,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-25 22:13:42] 2026-02-26 05:13:42,206 [wrapper] ==== pilot stdout END ====
[2026-02-25 22:13:42] 2026-02-26 05:13:42,208 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-25 22:13:42] 2026-02-26 05:13:42,210 [wrapper] pilotpid: 566089
[2026-02-25 22:13:42] 2026-02-26 05:13:42,211 [wrapper] Pilot exit status: 0
[2026-02-25 22:13:42] 2026-02-26 05:13:42,217 [wrapper] pandaids: 7030393070
[2026-02-25 22:13:42] 2026-02-26 05:13:42,240 [wrapper] cleanup supervisor_pilot  608684 566090
[2026-02-25 22:13:42] 2026-02-26 05:13:42,242 [wrapper] Test setup, not cleaning
[2026-02-25 22:13:42] 2026-02-26 05:13:42,243 [wrapper] apfmon messages muted
[2026-02-25 22:13:42] 2026-02-26 05:13:42,244 [wrapper] ==== wrapper stdout END ====
[2026-02-25 22:13:42] 2026-02-26 05:13:42,246 [wrapper] ==== wrapper stderr END ====
[2026-02-25 22:13:42]  *** Error codes and diagnostics ***
[2026-02-25 22:13:42]     "exeErrorCode": 0,
[2026-02-25 22:13:42]     "exeErrorDiag": "",
[2026-02-25 22:13:42]     "pilotErrorCode": 0,
[2026-02-25 22:13:42]     "pilotErrorDiag": "",
[2026-02-25 22:13:42]  *** Listing of results directory ***
[2026-02-25 22:13:42] total 570800
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc    584627 Feb 25 16:19 pilot3.tar.gz
[2026-02-25 22:13:42] -rwx------ 1 boinc boinc     36322 Feb 25 16:22 runpilot2-wrapper.sh
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc      5111 Feb 25 16:23 queuedata.json
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc       100 Feb 25 21:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-25 22:13:42] -rwxr-xr-x 1 boinc boinc      7986 Feb 25 21:21 run_atlas
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc       105 Feb 25 21:21 job.xml
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc      9962 Feb 25 21:21 init_data.xml
[2026-02-25 22:13:42] -rw-r--r-- 2 boinc boinc 315450646 Feb 25 21:21 EVNT.48252644._000008.pool.root.1
[2026-02-25 22:13:42] -rw-r--r-- 2 boinc boinc     15845 Feb 25 21:21 start_atlas.sh
[2026-02-25 22:13:42] drwxrwx--x 2 boinc boinc      4096 Feb 25 21:21 shared
[2026-02-25 22:13:42] -rw-r--r-- 2 boinc boinc    597945 Feb 25 21:21 input.tar.gz
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc         0 Feb 25 21:21 boinc_lockfile
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc      2490 Feb 25 21:21 pandaJob.out
[2026-02-25 22:13:42] -rw------- 1 boinc boinc    997632 Feb 25 21:21 agis_schedconf.cvmfs.json
[2026-02-25 22:13:42] -rw------- 1 boinc boinc   1513015 Feb 25 21:21 agis_ddmendpoints.agis.ALL.json
[2026-02-25 22:13:42] -rw------- 1 boinc boinc       421 Feb 25 21:21 workernode_map.json
[2026-02-25 22:13:42] drwx------ 5 boinc boinc      4096 Feb 25 21:21 pilot3
[2026-02-25 22:13:42] -rw------- 1 boinc boinc        95 Feb 25 22:11 pilot_heartbeat.json
[2026-02-25 22:13:42] -rw------- 1 boinc boinc 263529038 Feb 25 22:12 HITS.48841707._000192.pool.root.1
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc       529 Feb 25 22:12 boinc_task_state.xml
[2026-02-25 22:13:42] -rw------- 1 boinc boinc      1023 Feb 25 22:12 memory_monitor_summary.json
[2026-02-25 22:13:42] -rw------- 1 boinc boinc    308405 Feb 25 22:12 log.48841707._000192.job.log.tgz.1
[2026-02-25 22:13:42] -rw------- 1 boinc boinc      6275 Feb 25 22:12 heartbeat.json
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc        27 Feb 25 22:13 wrapper_checkpoint.txt
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc      8192 Feb 25 22:13 boinc_mmap_file
[2026-02-25 22:13:42] -rw------- 1 boinc boinc      4814 Feb 25 22:13 pilotlog.txt
[2026-02-25 22:13:42] -rw------- 1 boinc boinc    479394 Feb 25 22:13 log.48841707._000192.job.log.1
[2026-02-25 22:13:42] -rw------- 1 boinc boinc       357 Feb 25 22:13 output.list
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc       620 Feb 25 22:13 runtime_log
[2026-02-25 22:13:42] -rw------- 1 boinc boinc    808960 Feb 25 22:13 result.tar.gz
[2026-02-25 22:13:42] -rw------- 1 boinc boinc       652 Feb 25 22:13 vboKDmvNdF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXR1KDmhPByYm.diag
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc      8918 Feb 25 22:13 runtime_log.err
[2026-02-25 22:13:42] -rw-r--r-- 1 boinc boinc     21586 Feb 25 22:13 stderr.txt
[2026-02-25 22:13:42] HITS file was successfully produced:
[2026-02-25 22:13:42] -rw------- 1 boinc boinc 263529038 Feb 25 22:12 shared/HITS.pool.root.1
[2026-02-25 22:13:42]  *** Contents of shared directory: ***
[2026-02-25 22:13:42] total 566816
[2026-02-25 22:13:42] -rw-r--r-- 2 boinc boinc 315450646 Feb 25 21:21 ATLAS.root_0
[2026-02-25 22:13:42] -rw-r--r-- 2 boinc boinc     15845 Feb 25 21:21 start_atlas.sh
[2026-02-25 22:13:42] -rw-r--r-- 2 boinc boinc    597945 Feb 25 21:21 input.tar.gz
[2026-02-25 22:13:42] -rw------- 1 boinc boinc 263529038 Feb 25 22:12 HITS.pool.root.1
[2026-02-25 22:13:42] -rw------- 1 boinc boinc    808960 Feb 25 22:13 result.tar.gz
22:13:43 (561719): run_atlas exited; CPU time 23166.040667
22:13:43 (561719): called boinc_finish(0)

</stderr_txt>
]]>

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