Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:33:19 (29087): wrapper (7.7.26015): starting
14:33:19 (29087): wrapper: running run_atlas (--nthreads 8)
[2026-02-26 14:33:19] Arguments: --nthreads 8
[2026-02-26 14:33:19] Threads: 8
[2026-02-26 14:33:19] Checking for CVMFS
[2026-02-26 14:33:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 14:33:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 14:33:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 14:33:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 14:33:23] 2.11.2.0 25293 104583 136116 156656 3 90 20131298 25165824 4452 130560 0 29464787 99.805 21830057 3488 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-26 14:33:23] CVMFS is ok
[2026-02-26 14:33:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 14:33:23] Checking for apptainer binary...
[2026-02-26 14:33:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 14:33:23] Running /usr/bin/apptainer --version
[2026-02-26 14:33:24] apptainer version 1.3.2-1.el7
[2026-02-26 14:33:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 14:33:33] cg-vwn372.simple-grid.lan
[2026-02-26 14:33:33] apptainer works
[2026-02-26 14:33:33] Set ATHENA_PROC_NUMBER=8
[2026-02-26 14:33:33] Set ATHENA_CORE_NUMBER=8
[2026-02-26 14:33:34] Starting ATLAS job with PandaID=7030255575
[2026-02-26 14:33:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 19:46:21]  *** The last 200 lines of the pilot log: ***
[2026-02-26 19:46:21] 2026-02-26 18:45:30,368 | INFO     | job 7030255575 has finished - writing final server update
[2026-02-26 19:46:21] 2026-02-26 18:45:30,368 | INFO     | total number of processed events: 400 (read)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,370 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-7030255575/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,371 | INFO     | extracted standard info from prmon json
[2026-02-26 19:46:21] 2026-02-26 18:45:30,371 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 19:46:21] 2026-02-26 18:45:30,371 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 19:46:21] 2026-02-26 18:45:30,372 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 19:46:21] 2026-02-26 18:45:30,372 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 19:46:21] 2026-02-26 18:45:30,378 | INFO     | fitting pss+swap vs Time
[2026-02-26 19:46:21] 2026-02-26 18:45:30,379 | INFO     | sum of square deviations: 8205826414.5
[2026-02-26 19:46:21] 2026-02-26 18:45:30,382 | INFO     | sum of deviations: 99511982627.49998
[2026-02-26 19:46:21] 2026-02-26 18:45:30,382 | INFO     | mean x: 1772122420.5
[2026-02-26 19:46:21] 2026-02-26 18:45:30,382 | INFO     | mean y: 2495913.2919463087
[2026-02-26 19:46:21] 2026-02-26 18:45:30,382 | INFO     | intersect: -21488016634.108128
[2026-02-26 19:46:21] 2026-02-26 18:45:30,383 | INFO     | chi2: 6.299620829655991
[2026-02-26 19:46:21] 2026-02-26 18:45:30,383 | INFO     | sum of square deviations: 7799669962.0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,389 | INFO     | sum of deviations: 117749532871.0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,390 | INFO     | mean x: 1772122268.0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,390 | INFO     | mean y: 2502658.3822525595
[2026-02-26 19:46:21] 2026-02-26 18:45:30,390 | INFO     | intersect: -26750753602.962242
[2026-02-26 19:46:21] 2026-02-26 18:45:30,391 | INFO     | chi2: 5.570089203739849
[2026-02-26 19:46:21] 2026-02-26 18:45:30,391 | INFO     | current chi2=5.570089203739849 (change=11.580564063186321 %)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,391 | INFO     | right removable region: 292
[2026-02-26 19:46:21] 2026-02-26 18:45:30,391 | INFO     | sum of square deviations: 7799669962.0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,394 | INFO     | sum of deviations: -4320936952.000008
[2026-02-26 19:46:21] 2026-02-26 18:45:30,394 | INFO     | mean x: 1772122573.0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,394 | INFO     | mean y: 2534870.2593856654
[2026-02-26 19:46:21] 2026-02-26 18:45:30,394 | INFO     | intersect: 984272552.2965826
[2026-02-26 19:46:21] 2026-02-26 18:45:30,395 | INFO     | chi2: 1.7638232801570928
[2026-02-26 19:46:21] 2026-02-26 18:45:30,395 | INFO     | current chi2=1.7638232801570928 (change=72.00111994274724 %)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,396 | INFO     | sum of square deviations: 7407141672.0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,398 | INFO     | sum of deviations: -41201209504.0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,399 | INFO     | mean x: 1772122725.5
[2026-02-26 19:46:21] 2026-02-26 18:45:30,399 | INFO     | mean y: 2549106.159722222
[2026-02-26 19:46:21] 2026-02-26 18:45:30,399 | INFO     | intersect: 9859738682.555471
[2026-02-26 19:46:21] 2026-02-26 18:45:30,399 | INFO     | chi2: 0.950146797017785
[2026-02-26 19:46:21] 2026-02-26 18:45:30,400 | INFO     | current chi2=0.950146797017785 (change=46.13140626349136 %)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,400 | INFO     | sum of square deviations: 7028008982.0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,403 | INFO     | sum of deviations: -43959831475.0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,403 | INFO     | mean x: 1772122878.0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,403 | INFO     | mean y: 2550201.363957597
[2026-02-26 19:46:21] 2026-02-26 18:45:30,403 | INFO     | intersect: 11087086841.74015
[2026-02-26 19:46:21] 2026-02-26 18:45:30,404 | INFO     | chi2: 0.9323439582070387
[2026-02-26 19:46:21] 2026-02-26 18:45:30,404 | INFO     | current chi2=0.9323439582070387 (change=1.8736935036379494 %)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,404 | INFO     | left removable region: 30
[2026-02-26 19:46:21] 2026-02-26 18:45:30,404 | INFO     | sum of square deviations: 5576683165.5
[2026-02-26 19:46:21] 2026-02-26 18:45:30,410 | INFO     | sum of deviations: 3050461892.000001
[2026-02-26 19:46:21] 2026-02-26 18:45:30,410 | INFO     | mean x: 1772123152.5
[2026-02-26 19:46:21] 2026-02-26 18:45:30,410 | INFO     | mean y: 2545947.7709923666
[2026-02-26 19:46:21] 2026-02-26 18:45:30,411 | INFO     | intersect: -966810564.7300146
[2026-02-26 19:46:21] 2026-02-26 18:45:30,411 | INFO     | chi2: 0.04890933721975886
[2026-02-26 19:46:21] 2026-02-26 18:45:30,411 | INFO     | current memory leak: 0.55 B/s (using 262 data points, chi2=0.05)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,412 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,412 | INFO     | ..............................
[2026-02-26 19:46:21] 2026-02-26 18:45:30,412 | INFO     | . Timing measurements:
[2026-02-26 19:46:21] 2026-02-26 18:45:30,412 | INFO     | . get job = 0 s
[2026-02-26 19:46:21] 2026-02-26 18:45:30,412 | INFO     | . initial setup = 95 s
[2026-02-26 19:46:21] 2026-02-26 18:45:30,412 | INFO     | . payload setup = 111 s
[2026-02-26 19:46:21] 2026-02-26 18:45:30,413 | INFO     | . stage-in = 0 s
[2026-02-26 19:46:21] 2026-02-26 18:45:30,413 | INFO     | . payload execution = 18274 s
[2026-02-26 19:46:21] 2026-02-26 18:45:30,413 | INFO     | . stage-out = 3 s
[2026-02-26 19:46:21] 2026-02-26 18:45:30,413 | INFO     | . log creation = 1 s
[2026-02-26 19:46:21] 2026-02-26 18:45:30,413 | INFO     | ..............................
[2026-02-26 19:46:21] 2026-02-26 18:45:30,548 | INFO     | 
[2026-02-26 19:46:21] 2026-02-26 18:45:30,548 | INFO     | job summary report
[2026-02-26 19:46:21] 2026-02-26 18:45:30,548 | INFO     | --------------------------------------------------
[2026-02-26 19:46:21] 2026-02-26 18:45:30,548 | INFO     | PanDA job id: 7030255575
[2026-02-26 19:46:21] 2026-02-26 18:45:30,548 | INFO     | task id: 48838416
[2026-02-26 19:46:21] 2026-02-26 18:45:30,548 | INFO     | errors: (none)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,548 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 19:46:21] 2026-02-26 18:45:30,548 | INFO     | pilot state: finished 
[2026-02-26 19:46:21] 2026-02-26 18:45:30,549 | INFO     | transexitcode: 0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,549 | INFO     | exeerrorcode: 0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,549 | INFO     | exeerrordiag: 
[2026-02-26 19:46:21] 2026-02-26 18:45:30,549 | INFO     | exitcode: 0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,549 | INFO     | exitmsg: OK
[2026-02-26 19:46:21] 2026-02-26 18:45:30,549 | INFO     | cpuconsumptiontime: 67726 s
[2026-02-26 19:46:21] 2026-02-26 18:45:30,549 | INFO     | nevents: 400
[2026-02-26 19:46:21] 2026-02-26 18:45:30,549 | INFO     | neventsw: 0
[2026-02-26 19:46:21] 2026-02-26 18:45:30,549 | INFO     | pid: 5323
[2026-02-26 19:46:21] 2026-02-26 18:45:30,549 | INFO     | pgrp: 5323
[2026-02-26 19:46:21] 2026-02-26 18:45:30,549 | INFO     | corecount: 8
[2026-02-26 19:46:21] 2026-02-26 18:45:30,550 | INFO     | event service: False
[2026-02-26 19:46:21] 2026-02-26 18:45:30,550 | INFO     | sizes: {0: 2281789, 1: 2282246, 2: 2282306, 12: 2282334, 18389: 2314643, 18390: 2314642, 18395: 2323826, 18396: 2323882, 18398: 2324076}
[2026-02-26 19:46:21] 2026-02-26 18:45:30,550 | INFO     | --------------------------------------------------
[2026-02-26 19:46:21] 2026-02-26 18:45:30,550 | INFO     | 
[2026-02-26 19:46:21] 2026-02-26 18:45:30,550 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2026-02-26 19:46:21] 2026-02-26 18:45:30,603 | INFO     | time since job start (18411s) is within the limit (349056.0s)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,876 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,876 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,877 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,877 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,878 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,878 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,878 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,878 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,878 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,878 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,879 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,879 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 19:46:21] 2026-02-26 18:45:30,879 | INFO     | job 7030255575 has completed (purged errors)
[2026-02-26 19:46:21] 2026-02-26 18:45:30,879 | INFO     | overall cleanup function is called
[2026-02-26 19:46:21] 2026-02-26 18:45:31,888 | INFO     | --- collectZombieJob: --- 10, [5323]
[2026-02-26 19:46:21] 2026-02-26 18:45:31,888 | INFO     | zombie collector waiting for pid 5323
[2026-02-26 19:46:21] 2026-02-26 18:45:31,888 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 19:46:21] 2026-02-26 18:45:31,888 | INFO     | collected zombie processes
[2026-02-26 19:46:21] 2026-02-26 18:45:31,888 | INFO     | will attempt to kill all subprocesses of pid=5323
[2026-02-26 19:46:21] 2026-02-26 18:45:32,024 | INFO     | process IDs to be killed: [5323] (in reverse order)
[2026-02-26 19:46:21] 2026-02-26 18:45:33,026 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 19:46:21] 2026-02-26 18:45:33,026 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 19:46:21] 2026-02-26 18:45:33,029 | INFO     | did not find any defunct processes belonging to 5323
[2026-02-26 19:46:21] 2026-02-26 18:45:33,032 | INFO     | did not find any defunct processes belonging to 5323
[2026-02-26 19:46:21] 2026-02-26 18:45:33,032 | INFO     | ready for new job
[2026-02-26 19:46:21] 2026-02-26 18:45:33,032 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 19:46:21] 2026-02-26 18:45:33,034 | INFO     | **************************************
[2026-02-26 19:46:21] 2026-02-26 18:45:33,035 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 19:46:21] 2026-02-26 18:45:33,035 | INFO     | **************************************
[2026-02-26 19:46:21] 2026-02-26 18:45:33,035 | INFO     | 
[2026-02-26 19:46:21] 2026-02-26 18:45:33,035 | INFO     | pilot is running in a VM
[2026-02-26 19:46:21] 2026-02-26 18:45:33,036 | INFO     | architecture information:
[2026-02-26 19:46:21] 2026-02-26 18:45:33,039 | INFO     | executing command: cat /etc/os-release
[2026-02-26 19:46:21] 2026-02-26 18:45:33,220 | INFO     | cat /etc/os-release:
[2026-02-26 19:46:21] NAME="CentOS Linux"
[2026-02-26 19:46:21] VERSION="7 (Core)"
[2026-02-26 19:46:21] ID="centos"
[2026-02-26 19:46:21] ID_LIKE="rhel fedora"
[2026-02-26 19:46:21] VERSION_ID="7"
[2026-02-26 19:46:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 19:46:21] ANSI_COLOR="0;31"
[2026-02-26 19:46:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 19:46:21] HOME_URL="https://www.centos.org/"
[2026-02-26 19:46:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 19:46:21] 
[2026-02-26 19:46:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 19:46:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 19:46:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 19:46:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 19:46:21] 
[2026-02-26 19:46:21] 2026-02-26 18:45:33,221 | INFO     | **************************************
[2026-02-26 19:46:21] 2026-02-26 18:45:33,724 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2026-02-26 19:46:21] 2026-02-26 18:45:33,939 | INFO     | sufficient remaining disk space (496256417792 B)
[2026-02-26 19:46:21] 2026-02-26 18:45:33,940 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 19:46:21] 2026-02-26 18:45:33,940 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 19:46:21] 2026-02-26 18:45:33,940 | INFO     | update_server=False
[2026-02-26 19:46:21] 2026-02-26 18:45:33,940 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 19:46:21] 2026-02-26 18:45:34,047 | INFO     | all data control threads have been joined
[2026-02-26 19:46:21] 2026-02-26 18:45:34,152 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 19:46:21] 2026-02-26 18:45:34,288 | INFO     | all payload control threads have been joined
[2026-02-26 19:46:21] 2026-02-26 18:45:34,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 19:46:21] 2026-02-26 18:45:34,494 | INFO     | aborting loop
[2026-02-26 19:46:21] 2026-02-26 18:45:34,946 | INFO     | [job] retrieve thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:34,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 19:46:21] 2026-02-26 18:45:35,053 | INFO     | [data] control thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:35,294 | INFO     | [payload] control thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:35,374 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:35,423 | INFO     | all job control threads have been joined
[2026-02-26 19:46:21] 2026-02-26 18:45:35,500 | INFO     | [job] job monitor thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:35,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 19:46:21] 2026-02-26 18:45:35,622 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:35,647 | INFO     | [payload] validate_post thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:35,788 | INFO     | [job] validate thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:36,005 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:36,217 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:36,367 | INFO     | [data] copytool_in thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:36,414 | INFO     | [payload] failed_post thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:36,428 | INFO     | [job] control thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:36,568 | INFO     | [job] queue monitor thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:36,990 | INFO     | [data] copytool_out thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:45:38,161 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 19:46:21] 2026-02-26 18:46:03,792 | INFO     | PID=775 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-02-26 19:46:21] 2026-02-26 18:46:03,792 | INFO     | .. there are 9 such processes running
[2026-02-26 19:46:21] 2026-02-26 18:46:03,792 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 19:46:21] 2026-02-26 18:46:03,792 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 19:46:21] 2026-02-26 18:46:03,793 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 19:46:21] 2026-02-26 18:46:10,950 | INFO     | [monitor] cgroup control has ended
[2026-02-26 19:46:21] 2026-02-26 18:46:12,591 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140489382926144)>', '<ExcThread(monitor, started 140489076483840)>']
[2026-02-26 19:46:21] 2026-02-26 18:46:12,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 19:46:21] 2026-02-26 18:46:12,847 | INFO     | [monitor] control thread has ended
[2026-02-26 19:46:21] 2026-02-26 18:46:17,617 | INFO     | all workflow threads have been joined
[2026-02-26 19:46:21] 2026-02-26 18:46:17,617 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 19:46:21] 2026-02-26 18:46:17,617 | INFO     | traces error code: 0
[2026-02-26 19:46:21] 2026-02-26 18:46:17,617 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 19:46:21] 2026-02-26 18:46:17,811 [wrapper] ==== pilot stdout END ====
[2026-02-26 19:46:21] 2026-02-26 18:46:17,818 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 19:46:21] 2026-02-26 18:46:17,833 [wrapper] pilotpid: 775
[2026-02-26 19:46:21] 2026-02-26 18:46:17,838 [wrapper] Pilot exit status: 0
[2026-02-26 19:46:21] 2026-02-26 18:46:18,071 [wrapper] pandaids: 7030255575
[2026-02-26 19:46:21] 2026-02-26 18:46:18,541 [wrapper] cleanup supervisor_pilot 16682 776
[2026-02-26 19:46:21] 2026-02-26 18:46:18,558 [wrapper] Test setup, not cleaning
[2026-02-26 19:46:21] 2026-02-26 18:46:18,571 [wrapper] apfmon messages muted
[2026-02-26 19:46:21] 2026-02-26 18:46:18,583 [wrapper] ==== wrapper stdout END ====
[2026-02-26 19:46:21] 2026-02-26 18:46:18,657 [wrapper] ==== wrapper stderr END ====
[2026-02-26 19:46:21]  *** Error codes and diagnostics ***
[2026-02-26 19:46:21]     "exeErrorCode": 0,
[2026-02-26 19:46:21]     "exeErrorDiag": "",
[2026-02-26 19:46:21]     "pilotErrorCode": 0,
[2026-02-26 19:46:21]     "pilotErrorDiag": "",
[2026-02-26 19:46:21]  *** Listing of results directory ***
[2026-02-26 19:46:21] total 520644
[2026-02-26 19:46:21] -rwx------. 1 boinc boinc     36322 Feb 25 14:13 runpilot2-wrapper.sh
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc    584627 Feb 25 14:15 pilot3.tar.gz
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc      5111 Feb 25 14:18 queuedata.json
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc       100 Feb 26 14:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 19:46:21] -rwxr-xr-x. 1 boinc boinc      7986 Feb 26 14:33 run_atlas
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc       105 Feb 26 14:33 job.xml
[2026-02-26 19:46:21] -rw-r--r--. 2 boinc boinc 290652701 Feb 26 14:33 EVNT.48220085._000084.pool.root.1
[2026-02-26 19:46:21] -rw-r--r--. 2 boinc boinc     15845 Feb 26 14:33 start_atlas.sh
[2026-02-26 19:46:21] drwxrwx--x. 2 boinc boinc        68 Feb 26 14:33 shared
[2026-02-26 19:46:21] -rw-r--r--. 2 boinc boinc    597955 Feb 26 14:33 input.tar.gz
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc      6391 Feb 26 14:33 init_data.xml
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc         0 Feb 26 14:33 boinc_lockfile
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc      2566 Feb 26 14:33 pandaJob.out
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc       415 Feb 26 14:38 workernode_map.json
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc    998431 Feb 26 14:38 agis_schedconf.cvmfs.json
[2026-02-26 19:46:21] drwx------. 5 boinc boinc      4096 Feb 26 14:38 pilot3
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc 232429742 Feb 26 19:44 HITS.48838416._002037.pool.root.1
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc       531 Feb 26 19:44 boinc_task_state.xml
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc        95 Feb 26 19:45 pilot_heartbeat.json
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc      1011 Feb 26 19:45 memory_monitor_summary.json
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc   1513015 Feb 26 19:45 agis_ddmendpoints.agis.ALL.json
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc    515135 Feb 26 19:45 log.48838416._002037.job.log.tgz.1
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc      6312 Feb 26 19:45 heartbeat.json
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc      8192 Feb 26 19:46 boinc_mmap_file
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc        28 Feb 26 19:46 wrapper_checkpoint.txt
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc      4879 Feb 26 19:46 pilotlog.txt
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc   2555828 Feb 26 19:46 log.48838416._002037.job.log.1
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc       357 Feb 26 19:46 output.list
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc       620 Feb 26 19:46 runtime_log
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc   3092480 Feb 26 19:46 result.tar.gz
[2026-02-26 19:46:21] -rw-------. 1 boinc boinc       655 Feb 26 19:46 SYsKDmItTF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5nzKDmPeMoKn.diag
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc      8832 Feb 26 19:46 runtime_log.err
[2026-02-26 19:46:21] -rw-r--r--. 1 boinc boinc     20674 Feb 26 19:46 stderr.txt
[2026-02-26 19:46:22] HITS file was successfully produced:
[2026-02-26 19:46:22] -rw-------. 1 boinc boinc 232429742 Feb 26 19:44 shared/HITS.pool.root.1
[2026-02-26 19:46:22]  *** Contents of shared directory: ***
[2026-02-26 19:46:22] total 514448
[2026-02-26 19:46:22] -rw-r--r--. 2 boinc boinc 290652701 Feb 26 14:33 ATLAS.root_0
[2026-02-26 19:46:22] -rw-r--r--. 2 boinc boinc     15845 Feb 26 14:33 start_atlas.sh
[2026-02-26 19:46:22] -rw-r--r--. 2 boinc boinc    597955 Feb 26 14:33 input.tar.gz
[2026-02-26 19:46:22] -rw-------. 1 boinc boinc 232429742 Feb 26 19:44 HITS.pool.root.1
[2026-02-26 19:46:22] -rw-------. 1 boinc boinc   3092480 Feb 26 19:46 result.tar.gz
19:46:23 (29087): run_atlas exited; CPU time 68011.118936
19:46:23 (29087): called boinc_finish(0)

</stderr_txt>
]]>

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