Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-26 03:31:33 (51216): vboxwrapper version 26210
2026-02-26 03:31:33 (51216): BOINC client version: 8.2.8
2026-02-26 03:31:33 (51216): Detected: VirtualBox VboxManage Interface (Version: 7.2.6)
2026-02-26 03:31:33 (51216): Successfully copied 'init_data.xml' to the shared directory.
2026-02-26 03:31:33 (51216): Create VM. (boinc_8a8105b189256933, slot#5)
2026-02-26 03:31:34 (51216): Setting Memory Size for VM. (4100MB)
2026-02-26 03:31:34 (51216): Setting CPU Count for VM. (1)
2026-02-26 03:31:34 (51216): Setting Chipset Options for VM.
2026-02-26 03:31:34 (51216): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-26 03:31:34 (51216): Setting Boot Options for VM.
2026-02-26 03:31:34 (51216): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-26 03:31:34 (51216): Enabling VM Network Access.
2026-02-26 03:31:34 (51216): Disabling USB Support for VM.
2026-02-26 03:31:34 (51216): Disabling COM Port Support for VM.
2026-02-26 03:31:34 (51216): Disabling LPT Port Support for VM.
2026-02-26 03:31:34 (51216): Disabling Audio Support for VM.
2026-02-26 03:31:34 (51216): Disabling Clipboard Support for VM.
2026-02-26 03:31:34 (51216): Disabling Drag and Drop Support for VM.
2026-02-26 03:31:34 (51216): Adding storage controller(s) to VM.
2026-02-26 03:31:35 (51216): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-26 03:31:35 (51216): Adding VirtualBox Guest Additions to VM.
2026-02-26 03:31:35 (51216): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-26 03:31:35 (51216): forwarding host port 34679 to guest port 80
2026-02-26 03:31:35 (51216): Enabling remote desktop for VM.
2026-02-26 03:31:35 (51216): Required extension pack not installed, remote desktop not enabled.
2026-02-26 03:31:35 (51216): Enabling shared directory for VM.
2026-02-26 03:31:35 (51216): Starting VM using VBoxManage interface. (boinc_8a8105b189256933, slot#5)
2026-02-26 03:31:37 (51216): Successfully started VM. (PID = '51822')
2026-02-26 03:31:37 (51216): Reporting VM Process ID to BOINC.
2026-02-26 03:31:37 (51216): Guest Log: BIOS: VirtualBox 7.2.6
2026-02-26 03:31:37 (51216): Guest Log: CPUID EDX: 0x178bfbff
2026-02-26 03:31:37 (51216): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-26 03:31:37 (51216): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-26 03:31:37 (51216): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-26 03:31:37 (51216): Detected: Web Application Enabled (http://localhost:34679)
2026-02-26 03:31:37 (51216): Preference change detected
2026-02-26 03:31:37 (51216): Setting CPU throttle for VM. (100%)
2026-02-26 03:31:37 (51216): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-26 03:31:39 (51216): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-26 03:31:39 (51216): Guest Log: BIOS: Booting from Hard Disk...
2026-02-26 03:31:42 (51216): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-26 03:31:42 (51216): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-26 03:31:42 (51216): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-26 03:31:46 (51216): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-26 03:31:46 (51216): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-26 03:31:54 (51216): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-26 03:31:54 (51216): Guest Log: 00:00:00.000160 main     Log opened 2026-02-26T03:31:53.136790000Z
2026-02-26 03:31:54 (51216): Guest Log: 00:00:00.000291 main     OS Product: Linux
2026-02-26 03:31:54 (51216): Guest Log: 00:00:00.000333 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-26 03:31:54 (51216): Guest Log: 00:00:00.000362 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-26 03:31:54 (51216): Guest Log: 00:00:00.000388 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-26 03:31:54 (51216): Guest Log: 00:00:00.000389 main     Process ID: 1245
2026-02-26 03:31:54 (51216): Guest Log: 00:00:00.000389 main     Package type: LINUX_64BITS_GENERIC
2026-02-26 03:31:54 (51216): Guest Log: 00:00:00.001935 main     5.2.32 r132073 started. Verbose level = 0
2026-02-26 03:31:54 (51216): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-26 03:31:54 (51216): Guest Log: [INFO] Mounting shared directory
2026-02-26 03:31:55 (51216): Guest Log: [INFO] Checking for init_data.xml
2026-02-26 03:31:59 (51216): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-26 03:31:59 (51216): Guest Log: [INFO] Detected branch: prod
2026-02-26 03:31:59 (51216): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-26 03:31:59 (51216): Guest Log: Copying input files
2026-02-26 03:32:01 (51216): Guest Log: Copied input files into RunAtlas.
2026-02-26 03:32:01 (51216): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-26 03:32:01 (51216): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-26 03:32:01 (51216): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-26 03:32:01 (51216): Guest Log: Further information can be found at the LHC@home message board.
2026-02-26 03:32:12 (51216): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-26 03:32:12 (51216): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-26 03:32:12 (51216): Guest Log: 2.6.3.0 1514 0 32096 156640 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-26 03:32:13 (51216): Guest Log: copied the webapp to /var/www
2026-02-26 03:32:13 (51216): Guest Log: core_number=1
2026-02-26 03:32:13 (51216): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-26 03:32:14 (51216): Guest Log:  *** Starting ATLAS job. (PandaID=7030393542 taskID=48838620) ***
2026-02-26 05:10:38 (51216): Status Report: Elapsed Time: '6000.000000'
2026-02-26 05:10:38 (51216): Status Report: CPU Time: '5807.290000'
2026-02-26 06:49:39 (51216): Status Report: Elapsed Time: '12000.000000'
2026-02-26 06:49:39 (51216): Status Report: CPU Time: '11749.490000'
2026-02-26 08:28:40 (51216): Status Report: Elapsed Time: '18000.000000'
2026-02-26 08:28:40 (51216): Status Report: CPU Time: '17691.710000'
2026-02-26 10:07:41 (51216): Status Report: Elapsed Time: '24000.000000'
2026-02-26 10:07:41 (51216): Status Report: CPU Time: '23634.290000'
2026-02-26 11:46:42 (51216): Status Report: Elapsed Time: '30000.000000'
2026-02-26 11:46:42 (51216): Status Report: CPU Time: '29576.830000'
2026-02-26 12:52:49 (51216): Guest Log:  *** Job finished ***
2026-02-26 12:52:49 (51216): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:39,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:39,050 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:41,507 | INFO     | [monitor] cgroup control has ended
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:43,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139763069138752)>', '<ExcThread(monitor, started 139762623031040)>']
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:44,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:44,060 | INFO     | [monitor] control thread has ended
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,578 | INFO     | all workflow threads have been joined
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,578 | INFO     | end of generic workflow (traces error code: 0)
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,579 | INFO     | traces error code: 0
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,579 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,664 [wrapper] ==== pilot stdout END ====
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,668 [wrapper] ==== wrapper stdout RESUME ====
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,672 [wrapper] pilotpid: 5861
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,676 [wrapper] Pilot exit status: 0
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,761 [wrapper] pandaids: 7030393542
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,782 [wrapper] cleanup supervisor_pilot  1283 5862
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,787 [wrapper] Test setup, not cleaning
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,791 [wrapper] apfmon messages muted
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,795 [wrapper] ==== wrapper stdout END ====
2026-02-26 12:52:49 (51216): Guest Log: 2026-02-26 12:52:48,799 [wrapper] ==== wrapper stderr END ====
2026-02-26 12:52:49 (51216): Guest Log:  *** Error codes and diagnostics ***
2026-02-26 12:52:49 (51216): Guest Log:     "exeErrorCode": 0,
2026-02-26 12:52:49 (51216): Guest Log:     "exeErrorDiag": "",
2026-02-26 12:52:49 (51216): Guest Log:     "pilotErrorCode": 0,
2026-02-26 12:52:49 (51216): Guest Log:     "pilotErrorDiag": "",
2026-02-26 12:52:49 (51216): Guest Log:  *** Listing of results directory ***
2026-02-26 12:52:49 (51216): Guest Log: total 216332
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 25 23:19 pilot3.tar.gz
2026-02-26 12:52:49 (51216): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 25 23:21 runpilot2-wrapper.sh
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 25 23:22 queuedata.json
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 atlas atlas    597959 Feb 26 03:31 input.tar.gz
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 atlas atlas      9118 Feb 26 03:31 init_data.xml
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Feb 26 03:31 start_atlas.sh
2026-02-26 12:52:49 (51216): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 03:31 EVNT.48343799._000025.pool.root.1 -> /data/./ATLAS.root_0
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 atlas atlas      2563 Feb 26 03:32 pandaJob.out
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas    997640 Feb 26 03:32 agis_schedconf.cvmfs.json
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas       428 Feb 26 03:33 workernode_map.json
2026-02-26 12:52:49 (51216): Guest Log: drwx------. 5 atlas atlas      4096 Feb 26 03:33 pilot3
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas 207174519 Feb 26 12:51 HITS.48838620._000616.pool.root.1
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas      1027 Feb 26 12:51 memory_monitor_summary.json
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 26 12:52 agis_ddmendpoints.agis.ALL.json
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas    620949 Feb 26 12:52 log.48838620._000616.job.log.tgz.1
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas      6362 Feb 26 12:52 heartbeat.json
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas        95 Feb 26 12:52 pilot_heartbeat.json
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas      4801 Feb 26 12:52 pilotlog.txt
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas   4624502 Feb 26 12:52 log.48838620._000616.job.log.1
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas       357 Feb 26 12:52 output.list
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 atlas atlas      8634 Feb 26 12:52 runtime_log.err
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 26 12:52 runtime_log
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas   5263360 Feb 26 12:52 result.tar.gz
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas       658 Feb 26 12:52 ffoLDmTNdF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXO1KDma7Rhgn.diag
2026-02-26 12:52:49 (51216): Guest Log: Looking for outputfile HITS.48838620._000616.pool.root.1
2026-02-26 12:52:49 (51216): Guest Log: HITS file was successfully produced
2026-02-26 12:52:49 (51216): Guest Log: -rw-------. 1 atlas atlas 207174519 Feb 26 12:51 /home/atlas/RunAtlas/HITS.48838620._000616.pool.root.1
2026-02-26 12:52:49 (51216): Guest Log: Successfully finished the ATLAS job!
2026-02-26 12:52:49 (51216): Guest Log: Copying the results back to the shared directory!
2026-02-26 12:52:49 (51216): Guest Log:  *** Contents of shared directory: ***
2026-02-26 12:52:49 (51216): Guest Log: total 273628
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 root root 274299798 Feb 26 03:31 ATLAS.root_0
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 root root      9118 Feb 26 03:31 init_data.xml
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 root root    597959 Feb 26 03:31 input.tar.gz
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 root root   5263360 Feb 26 12:52 result.tar.gz
2026-02-26 12:52:49 (51216): Guest Log: -rw-r--r--. 1 root root     15845 Feb 26 03:31 start_atlas.sh
2026-02-26 12:52:49 (51216): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-26 12:52:49 (51216): VM Completion File Detected.
2026-02-26 12:52:49 (51216): Powering off VM.
2026-02-26 12:52:50 (51216): Successfully stopped VM.
2026-02-26 12:52:50 (51216): Deregistering VM. (boinc_8a8105b189256933, slot#5)
2026-02-26 12:52:50 (51216): Removing network bandwidth throttle group from VM.
2026-02-26 12:52:50 (51216): Removing VM from VirtualBox.
2026-02-26 12:52:55 (51216): called boinc_finish(0)

</stderr_txt>
]]>

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