Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:06:12 (20572): wrapper (7.7.26015): starting
02:06:12 (20572): wrapper: running run_atlas (--nthreads 8)
[2026-02-26 02:06:12] Arguments: --nthreads 8
[2026-02-26 02:06:12] Threads: 8
[2026-02-26 02:06:12] Checking for CVMFS
[2026-02-26 02:06:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 02:06:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 02:06:12] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 02:06:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 02:06:12] 2.11.2.0 11495 249859 148456 156646 2 49 11184673 18432000 1833 130560 0 156337131 99.982 9275315 26204 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-26 02:06:12] CVMFS is ok
[2026-02-26 02:06:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 02:06:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 02:06:12] Further information can be found at the LHC@home message board.
[2026-02-26 02:06:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 02:06:12] Checking for apptainer binary...
[2026-02-26 02:06:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 02:06:12] Running /usr/bin/apptainer --version
[2026-02-26 02:06:12] apptainer version 1.3.2-1.el7
[2026-02-26 02:06:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 02:06:13] c-206-31.aglt2.org
[2026-02-26 02:06:13] apptainer works
[2026-02-26 02:06:13] Set ATHENA_PROC_NUMBER=8
[2026-02-26 02:06:13] Set ATHENA_CORE_NUMBER=8
[2026-02-26 02:06:13] Starting ATLAS job with PandaID=7030484732
[2026-02-26 02:06:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 06:46:13]  *** The last 200 lines of the pilot log: ***
[2026-02-26 06:46:13] 2026-02-26 11:45:39,799 | INFO     | mean x: 1772097964.0
[2026-02-26 06:46:13] 2026-02-26 11:45:39,800 | INFO     | mean y: 2469002.4363636365
[2026-02-26 06:46:13] 2026-02-26 11:45:39,800 | INFO     | intersect: -7530862269.204357
[2026-02-26 06:46:13] 2026-02-26 11:45:39,800 | INFO     | chi2: 2.1454751360757216
[2026-02-26 06:46:13] 2026-02-26 11:45:39,801 | INFO     | sum of square deviations: 6103286527.5
[2026-02-26 06:46:13] 2026-02-26 11:45:39,804 | INFO     | sum of deviations: 45307546229.50001
[2026-02-26 06:46:13] 2026-02-26 11:45:39,804 | INFO     | mean x: 1772097811.5
[2026-02-26 06:46:13] 2026-02-26 11:45:39,804 | INFO     | mean y: 2476781.085185185
[2026-02-26 06:46:13] 2026-02-26 11:45:39,805 | INFO     | intersect: -13152632872.699955
[2026-02-26 06:46:13] 2026-02-26 11:45:39,805 | INFO     | chi2: 1.323068807190514
[2026-02-26 06:46:13] 2026-02-26 11:45:39,805 | INFO     | current chi2=1.323068807190514 (change=38.332130494388636 %)
[2026-02-26 06:46:13] 2026-02-26 11:45:39,806 | INFO     | sum of square deviations: 5770452380.0
[2026-02-26 06:46:13] 2026-02-26 11:45:39,809 | INFO     | sum of deviations: 44097585456.99999
[2026-02-26 06:46:13] 2026-02-26 11:45:39,809 | INFO     | mean x: 1772097659.0
[2026-02-26 06:46:13] 2026-02-26 11:45:39,809 | INFO     | mean y: 2476226.4641509433
[2026-02-26 06:46:13] 2026-02-26 11:45:39,809 | INFO     | intersect: -13539829092.049217
[2026-02-26 06:46:13] 2026-02-26 11:45:39,810 | INFO     | chi2: 1.323465426065352
[2026-02-26 06:46:13] 2026-02-26 11:45:39,810 | INFO     | current chi2=1.323465426065352 (change=-0.029977191865048283 %)
[2026-02-26 06:46:13] 2026-02-26 11:45:39,810 | INFO     | right removable region: 264
[2026-02-26 06:46:13] 2026-02-26 11:45:39,811 | INFO     | sum of square deviations: 6103286527.5
[2026-02-26 06:46:13] 2026-02-26 11:45:39,814 | INFO     | sum of deviations: -10071260155.5
[2026-02-26 06:46:13] 2026-02-26 11:45:39,814 | INFO     | mean x: 1772098116.5
[2026-02-26 06:46:13] 2026-02-26 11:45:39,814 | INFO     | mean y: 2485401.8333333335
[2026-02-26 06:46:13] 2026-02-26 11:45:39,814 | INFO     | intersect: 2926690430.0468063
[2026-02-26 06:46:13] 2026-02-26 11:45:39,815 | INFO     | chi2: 0.8708729309600671
[2026-02-26 06:46:13] 2026-02-26 11:45:39,815 | INFO     | current chi2=0.8708729309600671 (change=59.408854648720066 %)
[2026-02-26 06:46:13] 2026-02-26 11:45:39,816 | INFO     | sum of square deviations: 5770452380.0
[2026-02-26 06:46:13] 2026-02-26 11:45:39,819 | INFO     | sum of deviations: -3817329309.0000057
[2026-02-26 06:46:13] 2026-02-26 11:45:39,819 | INFO     | mean x: 1772098269.0
[2026-02-26 06:46:13] 2026-02-26 11:45:39,819 | INFO     | mean y: 2482518.577358491
[2026-02-26 06:46:13] 2026-02-26 11:45:39,819 | INFO     | intersect: 1174779284.100944
[2026-02-26 06:46:13] 2026-02-26 11:45:39,820 | INFO     | chi2: 0.8397372908994329
[2026-02-26 06:46:13] 2026-02-26 11:45:39,820 | INFO     | current chi2=0.8397372908994329 (change=3.5752219358006285 %)
[2026-02-26 06:46:13] 2026-02-26 11:45:39,820 | INFO     | left removable region: 20
[2026-02-26 06:46:13] 2026-02-26 11:45:39,821 | INFO     | sum of square deviations: 4504437945.0
[2026-02-26 06:46:13] 2026-02-26 11:45:39,823 | INFO     | sum of deviations: 10055313291.500013
[2026-02-26 06:46:13] 2026-02-26 11:45:39,823 | INFO     | mean x: 1772098238.5
[2026-02-26 06:46:13] 2026-02-26 11:45:39,824 | INFO     | mean y: 2492169.799180328
[2026-02-26 06:46:13] 2026-02-26 11:45:39,824 | INFO     | intersect: -3953384942.729852
[2026-02-26 06:46:13] 2026-02-26 11:45:39,824 | INFO     | chi2: 0.0004646964787085541
[2026-02-26 06:46:13] 2026-02-26 11:45:39,824 | INFO     | current memory leak: 2.23 B/s (using 244 data points, chi2=0.00)
[2026-02-26 06:46:13] 2026-02-26 11:45:39,825 | INFO     | could have reported an average CPU frequency of 2394 MHz (13 samples)
[2026-02-26 06:46:13] 2026-02-26 11:45:39,825 | INFO     | ..............................
[2026-02-26 06:46:13] 2026-02-26 11:45:39,826 | INFO     | . Timing measurements:
[2026-02-26 06:46:13] 2026-02-26 11:45:39,826 | INFO     | . get job = 0 s
[2026-02-26 06:46:13] 2026-02-26 11:45:39,826 | INFO     | . initial setup = 5 s
[2026-02-26 06:46:13] 2026-02-26 11:45:39,826 | INFO     | . payload setup = 4 s
[2026-02-26 06:46:13] 2026-02-26 11:45:39,826 | INFO     | . stage-in = 0 s
[2026-02-26 06:46:13] 2026-02-26 11:45:39,826 | INFO     | . payload execution = 16728 s
[2026-02-26 06:46:13] 2026-02-26 11:45:39,827 | INFO     | . stage-out = 2 s
[2026-02-26 06:46:13] 2026-02-26 11:45:39,827 | INFO     | . log creation = 0 s
[2026-02-26 06:46:13] 2026-02-26 11:45:39,827 | INFO     | ..............................
[2026-02-26 06:46:13] 2026-02-26 11:45:39,986 | INFO     | 
[2026-02-26 06:46:13] 2026-02-26 11:45:39,986 | INFO     | job summary report
[2026-02-26 06:46:13] 2026-02-26 11:45:39,986 | INFO     | --------------------------------------------------
[2026-02-26 06:46:13] 2026-02-26 11:45:39,986 | INFO     | PanDA job id: 7030484732
[2026-02-26 06:46:13] 2026-02-26 11:45:39,987 | INFO     | task id: 48842412
[2026-02-26 06:46:13] 2026-02-26 11:45:39,987 | INFO     | errors: (none)
[2026-02-26 06:46:13] 2026-02-26 11:45:39,987 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 06:46:13] 2026-02-26 11:45:39,987 | INFO     | pilot state: finished 
[2026-02-26 06:46:13] 2026-02-26 11:45:39,987 | INFO     | transexitcode: 0
[2026-02-26 06:46:13] 2026-02-26 11:45:39,987 | INFO     | exeerrorcode: 0
[2026-02-26 06:46:13] 2026-02-26 11:45:39,988 | INFO     | exeerrordiag: 
[2026-02-26 06:46:13] 2026-02-26 11:45:39,988 | INFO     | exitcode: 0
[2026-02-26 06:46:13] 2026-02-26 11:45:39,988 | INFO     | exitmsg: OK
[2026-02-26 06:46:13] 2026-02-26 11:45:39,988 | INFO     | cpuconsumptiontime: 128861 s
[2026-02-26 06:46:13] 2026-02-26 11:45:39,988 | INFO     | nevents: 400
[2026-02-26 06:46:13] 2026-02-26 11:45:39,989 | INFO     | neventsw: 0
[2026-02-26 06:46:13] 2026-02-26 11:45:39,989 | INFO     | pid: 28698
[2026-02-26 06:46:13] 2026-02-26 11:45:39,989 | INFO     | pgrp: 28698
[2026-02-26 06:46:13] 2026-02-26 11:45:39,989 | INFO     | corecount: 8
[2026-02-26 06:46:13] 2026-02-26 11:45:39,989 | INFO     | event service: False
[2026-02-26 06:46:13] 2026-02-26 11:45:39,989 | INFO     | sizes: {0: 2281983, 1: 2282444, 12: 2282444, 16736: 2314257, 16739: 2323255, 16741: 2323633}
[2026-02-26 06:46:13] 2026-02-26 11:45:39,990 | INFO     | --------------------------------------------------
[2026-02-26 06:46:13] 2026-02-26 11:45:39,990 | INFO     | 
[2026-02-26 06:46:13] 2026-02-26 11:45:39,990 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-26 06:46:13] 2026-02-26 11:45:40,007 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,008 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,008 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,008 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,008 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,009 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,009 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,009 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,009 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,009 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,009 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,011 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,011 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 06:46:13] 2026-02-26 11:45:40,011 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,011 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 06:46:13] 2026-02-26 11:45:40,011 | INFO     | job 7030484732 has completed (purged errors)
[2026-02-26 06:46:13] 2026-02-26 11:45:40,012 | INFO     | overall cleanup function is called
[2026-02-26 06:46:13] 2026-02-26 11:45:41,017 | INFO     | --- collectZombieJob: --- 10, [28698]
[2026-02-26 06:46:13] 2026-02-26 11:45:41,017 | INFO     | zombie collector waiting for pid 28698
[2026-02-26 06:46:13] 2026-02-26 11:45:41,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 06:46:13] 2026-02-26 11:45:41,018 | INFO     | collected zombie processes
[2026-02-26 06:46:13] 2026-02-26 11:45:41,018 | INFO     | will attempt to kill all subprocesses of pid=28698
[2026-02-26 06:46:13] 2026-02-26 11:45:41,185 | INFO     | process IDs to be killed: [28698] (in reverse order)
[2026-02-26 06:46:13] 2026-02-26 11:45:41,230 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 06:46:13] 2026-02-26 11:45:41,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 06:46:13] 2026-02-26 11:45:41,233 | INFO     | did not find any defunct processes belonging to 28698
[2026-02-26 06:46:13] 2026-02-26 11:45:41,235 | INFO     | did not find any defunct processes belonging to 28698
[2026-02-26 06:46:13] 2026-02-26 11:45:41,236 | INFO     | ready for new job
[2026-02-26 06:46:13] 2026-02-26 11:45:41,236 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 06:46:13] 2026-02-26 11:45:41,237 | INFO     | **************************************
[2026-02-26 06:46:13] 2026-02-26 11:45:41,237 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 06:46:13] 2026-02-26 11:45:41,237 | INFO     | **************************************
[2026-02-26 06:46:13] 2026-02-26 11:45:41,238 | INFO     | 
[2026-02-26 06:46:13] 2026-02-26 11:45:41,238 | INFO     | architecture information:
[2026-02-26 06:46:13] 2026-02-26 11:45:41,239 | INFO     | executing command: cat /etc/os-release
[2026-02-26 06:46:13] 2026-02-26 11:45:41,249 | INFO     | cat /etc/os-release:
[2026-02-26 06:46:13] NAME="CentOS Linux"
[2026-02-26 06:46:13] VERSION="7 (Core)"
[2026-02-26 06:46:13] ID="centos"
[2026-02-26 06:46:13] ID_LIKE="rhel fedora"
[2026-02-26 06:46:13] VERSION_ID="7"
[2026-02-26 06:46:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 06:46:13] ANSI_COLOR="0;31"
[2026-02-26 06:46:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 06:46:13] HOME_URL="https://www.centos.org/"
[2026-02-26 06:46:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 06:46:13] 
[2026-02-26 06:46:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 06:46:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 06:46:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 06:46:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 06:46:13] 
[2026-02-26 06:46:13] 2026-02-26 11:45:41,249 | INFO     | **************************************
[2026-02-26 06:46:13] 2026-02-26 11:45:41,751 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-26 06:46:13] 2026-02-26 11:45:41,777 | INFO     | sufficient remaining disk space (28255977472 B)
[2026-02-26 06:46:13] 2026-02-26 11:45:41,777 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 06:46:13] 2026-02-26 11:45:41,778 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 06:46:13] 2026-02-26 11:45:41,778 | INFO     | update_server=False
[2026-02-26 06:46:13] 2026-02-26 11:45:41,778 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 06:46:13] 2026-02-26 11:45:41,778 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 06:46:13] 2026-02-26 11:45:41,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 06:46:13] 2026-02-26 11:45:41,779 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 06:46:13] 2026-02-26 11:45:41,785 | WARNING  | process 28698 can no longer be monitored (due to stat problems) - aborting
[2026-02-26 06:46:13] 2026-02-26 11:45:41,899 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 06:46:13] 2026-02-26 11:45:41,900 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 06:46:13] 2026-02-26 11:45:41,901 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-26 06:46:13] 2026-02-26 11:45:41,901 | WARNING  | maxPSS not found in memory monitor output
[2026-02-26 06:46:13] 2026-02-26 11:45:41,902 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/0/PanDA_Pilot-7030484732/payload.stdout) since it has not been created yet
[2026-02-26 06:46:13] 2026-02-26 11:45:41,902 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-26 06:46:13] 2026-02-26 11:45:41,919 | INFO     | sufficient remaining disk space (28255977472 B)
[2026-02-26 06:46:13] 2026-02-26 11:45:41,919 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-26 06:46:13] 2026-02-26 11:45:41,919 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-7030484732/HITS.48842412._000048.pool.root.1 since it does not exist
[2026-02-26 06:46:13] 2026-02-26 11:45:42,081 | INFO     | number of running child processes to parent process 28698: 1
[2026-02-26 06:46:13] 2026-02-26 11:45:42,081 | INFO     | maximum number of monitored processes: 6
[2026-02-26 06:46:13] 2026-02-26 11:45:42,081 | INFO     | aborting job monitoring since job object (job id=7030484732) has expired
[2026-02-26 06:46:13] 2026-02-26 11:45:42,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 06:46:13] 2026-02-26 11:45:42,081 | INFO     | will abort loop
[2026-02-26 06:46:13] 2026-02-26 11:45:42,367 | INFO     | all payload control threads have been joined
[2026-02-26 06:46:13] 2026-02-26 11:45:42,576 | INFO     | all data control threads have been joined
[2026-02-26 06:46:13] 2026-02-26 11:45:42,777 | INFO     | all job control threads have been joined
[2026-02-26 06:46:13] 2026-02-26 11:45:42,783 | INFO     | [job] retrieve thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:42,784 | INFO     | [job] queue monitor thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:42,797 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:43,018 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:43,087 | INFO     | [job] job monitor thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:43,170 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:43,372 | INFO     | [payload] control thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:43,505 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:43,581 | INFO     | [data] control thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:43,735 | INFO     | [job] validate thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:43,742 | INFO     | [data] copytool_in thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:43,782 | INFO     | [job] control thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:43,785 | INFO     | [data] copytool_out thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:44,123 | INFO     | [payload] validate_post thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:44,230 | INFO     | [payload] failed_post thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:45,785 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 06:46:13] 2026-02-26 11:45:53,880 | INFO     | [monitor] cgroup control has ended
[2026-02-26 06:46:13] 2026-02-26 11:45:54,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139834613917504)>', '<ExcThread(monitor, started 139833800390400)>']
[2026-02-26 06:46:13] 2026-02-26 11:45:59,961 | INFO     | all workflow threads have been joined
[2026-02-26 06:46:13] 2026-02-26 11:45:59,961 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 06:46:13] 2026-02-26 11:45:59,961 | INFO     | traces error code: 0
[2026-02-26 06:46:13] 2026-02-26 11:45:59,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 06:46:13] 2026-02-26 11:46:12,991 | INFO     | PID=24289 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-26 06:46:13] 2026-02-26 11:46:12,991 | INFO     | .. there are 3 such processes running
[2026-02-26 06:46:13] 2026-02-26 11:46:12,992 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 06:46:13] 2026-02-26 11:46:12,992 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 06:46:13] 2026-02-26 11:46:12,993 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 06:46:13] 2026-02-26 11:46:12,993 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 06:46:13] 2026-02-26 11:46:12,993 | INFO     | [monitor] control thread has ended
[2026-02-26 06:46:13] 2026-02-26 11:46:13,111 [wrapper] ==== pilot stdout END ====
[2026-02-26 06:46:13] 2026-02-26 11:46:13,113 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 06:46:13] 2026-02-26 11:46:13,116 [wrapper] pilotpid: 24289
[2026-02-26 06:46:13] 2026-02-26 11:46:13,121 [wrapper] Pilot exit status: 0
[2026-02-26 06:46:13] 2026-02-26 11:46:13,130 [wrapper] pandaids: 7030484732
[2026-02-26 06:46:13] 2026-02-26 11:46:13,166 [wrapper] cleanup supervisor_pilot  3394 24290
[2026-02-26 06:46:13] 2026-02-26 11:46:13,169 [wrapper] Test setup, not cleaning
[2026-02-26 06:46:13] 2026-02-26 11:46:13,171 [wrapper] apfmon messages muted
[2026-02-26 06:46:13] 2026-02-26 11:46:13,174 [wrapper] ==== wrapper stdout END ====
[2026-02-26 06:46:13] 2026-02-26 11:46:13,176 [wrapper] ==== wrapper stderr END ====
[2026-02-26 06:46:13]  *** Error codes and diagnostics ***
[2026-02-26 06:46:13]     "exeErrorCode": 0,
[2026-02-26 06:46:13]     "exeErrorDiag": "",
[2026-02-26 06:46:13]     "pilotErrorCode": 0,
[2026-02-26 06:46:13]     "pilotErrorDiag": "",
[2026-02-26 06:46:13]  *** Listing of results directory ***
[2026-02-26 06:46:13] total 428484
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas    584627 Feb 25 21:55 pilot3.tar.gz
[2026-02-26 06:46:13] -rwx------ 1 boincer umatlas     36322 Feb 25 21:56 runpilot2-wrapper.sh
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas      5111 Feb 25 21:58 queuedata.json
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas       100 Feb 26 02:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 06:46:13] -rwxr-xr-x 1 boincer umatlas      7986 Feb 26 02:06 run_atlas
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas       105 Feb 26 02:06 job.xml
[2026-02-26 06:46:13] -rw-r--r-- 2 boincer umatlas 243401010 Feb 26 02:06 EVNT.48447993._000002.pool.root.1
[2026-02-26 06:46:13] -rw-r--r-- 2 boincer umatlas     15845 Feb 26 02:06 start_atlas.sh
[2026-02-26 06:46:13] drwxrwx--x 2 boincer umatlas      4096 Feb 26 02:06 shared
[2026-02-26 06:46:13] -rw-r--r-- 2 boincer umatlas    597994 Feb 26 02:06 input.tar.gz
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas         0 Feb 26 02:06 boinc_lockfile
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas      2686 Feb 26 02:06 pandaJob.out
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas        57 Feb 26 02:06 setup.sh.local
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas    997640 Feb 26 02:06 agis_schedconf.cvmfs.json
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas       434 Feb 26 02:06 workernode_map.json
[2026-02-26 06:46:13] drwx------ 5 boincer umatlas      4096 Feb 26 02:06 pilot3
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas      5953 Feb 26 06:39 init_data.xml
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas       531 Feb 26 06:45 boinc_task_state.xml
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas 185700911 Feb 26 06:45 HITS.48842412._000048.pool.root.1
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas      1054 Feb 26 06:45 memory_monitor_summary.json
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas   1513015 Feb 26 06:45 agis_ddmendpoints.agis.ALL.json
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas    515244 Feb 26 06:45 log.48842412._000048.job.log.tgz.1
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas      6410 Feb 26 06:45 heartbeat.json
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas      8192 Feb 26 06:46 boinc_mmap_file
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas        29 Feb 26 06:46 wrapper_checkpoint.txt
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas        95 Feb 26 06:46 pilot_heartbeat.json
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas       820 Feb 26 06:46 pilotlog.txt
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas   2353579 Feb 26 06:46 log.48842412._000048.job.log.1
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas       357 Feb 26 06:46 output.list
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas       620 Feb 26 06:46 runtime_log
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas   2887680 Feb 26 06:46 result.tar.gz
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas      9342 Feb 26 06:46 runtime_log.err
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas       663 Feb 26 06:46 q8qMDmmjgF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmeC0KDmJn8gJn.diag
[2026-02-26 06:46:13] -rw-r--r-- 1 boincer umatlas     21401 Feb 26 06:46 stderr.txt
[2026-02-26 06:46:13] HITS file was successfully produced:
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas 185700911 Feb 26 06:45 shared/HITS.pool.root.1
[2026-02-26 06:46:13]  *** Contents of shared directory: ***
[2026-02-26 06:46:13] total 422476
[2026-02-26 06:46:13] -rw-r--r-- 2 boincer umatlas 243401010 Feb 26 02:06 ATLAS.root_0
[2026-02-26 06:46:13] -rw-r--r-- 2 boincer umatlas     15845 Feb 26 02:06 start_atlas.sh
[2026-02-26 06:46:13] -rw-r--r-- 2 boincer umatlas    597994 Feb 26 02:06 input.tar.gz
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas 185700911 Feb 26 06:45 HITS.pool.root.1
[2026-02-26 06:46:13] -rw------- 1 boincer umatlas   2887680 Feb 26 06:46 result.tar.gz
06:46:14 (20572): run_atlas exited; CPU time 129098.577280
06:46:14 (20572): called boinc_finish(0)

</stderr_txt>
]]>

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