Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
12:07:48 (1327735): wrapper (7.7.26015): starting
12:07:48 (1327735): wrapper: running run_atlas (--nthreads 2)
[2026-02-26 12:07:48] Arguments: --nthreads 2
[2026-02-26 12:07:48] Threads: 2
[2026-02-26 12:07:48] Checking for CVMFS
[2026-02-26 12:07:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 12:07:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 12:07:49] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 12:07:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 12:07:49] 2.9.2.0 617737 1089 54864 156651 0 50 25137132 36864001 0 130560 0 287515 99.970 48703 18240 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-26 12:07:49] CVMFS is ok
[2026-02-26 12:07:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 12:07:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 12:07:49] Further information can be found at the LHC@home message board.
[2026-02-26 12:07:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 12:07:49] Checking for apptainer binary...
[2026-02-26 12:07:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 12:07:49] Running /usr/bin/apptainer --version
[2026-02-26 12:07:49] apptainer version 1.4.1-1.1
[2026-02-26 12:07:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 12:07:49] thA369
[2026-02-26 12:07:49] apptainer works
[2026-02-26 12:07:49] Set ATHENA_PROC_NUMBER=2
[2026-02-26 12:07:49] Set ATHENA_CORE_NUMBER=2
[2026-02-26 12:07:49] Starting ATLAS job with PandaID=7030349134
[2026-02-26 12:07:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 14:51:23]  *** The last 200 lines of the pilot log: ***
[2026-02-26 14:51:23] 2026-02-26 13:50:17,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 14:51:23] 2026-02-26 13:50:17,525 | INFO     | did not find any defunct processes belonging to 1336567
[2026-02-26 14:51:23] 2026-02-26 13:50:17,526 | INFO     | did not find any defunct processes belonging to 1336567
[2026-02-26 14:51:23] 2026-02-26 13:50:17,526 | INFO     | ready for new job
[2026-02-26 14:51:23] 2026-02-26 13:50:17,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 14:51:23] 2026-02-26 13:50:17,527 | INFO     | **************************************
[2026-02-26 14:51:23] 2026-02-26 13:50:17,527 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 14:51:23] 2026-02-26 13:50:17,527 | INFO     | **************************************
[2026-02-26 14:51:23] 2026-02-26 13:50:17,527 | INFO     | 
[2026-02-26 14:51:23] 2026-02-26 13:50:17,527 | INFO     | architecture information:
[2026-02-26 14:51:23] 2026-02-26 13:50:17,527 | INFO     | executing command: cat /etc/os-release
[2026-02-26 14:51:23] 2026-02-26 13:50:17,537 | INFO     | cat /etc/os-release:
[2026-02-26 14:51:23] NAME="CentOS Linux"
[2026-02-26 14:51:23] VERSION="7 (Core)"
[2026-02-26 14:51:23] ID="centos"
[2026-02-26 14:51:23] ID_LIKE="rhel fedora"
[2026-02-26 14:51:23] VERSION_ID="7"
[2026-02-26 14:51:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 14:51:23] ANSI_COLOR="0;31"
[2026-02-26 14:51:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 14:51:23] HOME_URL="https://www.centos.org/"
[2026-02-26 14:51:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 14:51:23] 
[2026-02-26 14:51:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 14:51:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 14:51:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 14:51:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 14:51:23] 
[2026-02-26 14:51:23] 2026-02-26 13:50:17,537 | INFO     | **************************************
[2026-02-26 14:51:23] 2026-02-26 13:50:18,039 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-26 14:51:23] 2026-02-26 13:50:18,052 | INFO     | sufficient remaining disk space (335000109056 B)
[2026-02-26 14:51:23] 2026-02-26 13:50:18,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 14:51:23] 2026-02-26 13:50:18,052 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 14:51:23] 2026-02-26 13:50:18,052 | INFO     | update_server=False
[2026-02-26 14:51:23] 2026-02-26 13:50:18,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 14:51:23] 2026-02-26 13:50:18,053 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 14:51:23] 2026-02-26 13:50:18,312 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-26 14:51:23] 2026-02-26 13:50:18,312 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-26 14:51:23] 2026-02-26 13:50:18,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 14:51:23] 2026-02-26 13:50:18,313 | INFO     | will abort loop
[2026-02-26 14:51:23] 2026-02-26 13:50:18,538 | INFO     | all data control threads have been joined
[2026-02-26 14:51:23] 2026-02-26 13:50:18,810 | INFO     | all payload control threads have been joined
[2026-02-26 14:51:23] 2026-02-26 13:50:18,989 | INFO     | all job control threads have been joined
[2026-02-26 14:51:23] 2026-02-26 13:50:19,058 | INFO     | [job] queue monitor thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:19,058 | INFO     | [job] retrieve thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:19,318 | INFO     | [job] job monitor thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:19,430 | INFO     | [payload] validate_post thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:19,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 14:51:23] 2026-02-26 13:50:19,543 | INFO     | [data] control thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:19,699 | INFO     | [job] validate thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:19,742 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:19,796 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:19,815 | INFO     | [payload] control thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:19,941 | INFO     | [data] copytool_in thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:19,995 | INFO     | [job] control thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:20,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 14:51:23] 2026-02-26 13:50:20,218 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:20,545 | INFO     | [payload] failed_post thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:21,521 | INFO     | [data] copytool_out thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:24,047 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:28,185 | INFO     | job.realtimelogging is not enabled
[2026-02-26 14:51:23] 2026-02-26 13:50:29,190 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 14:51:23] 2026-02-26 13:50:48,986 | INFO     | PID=1331883 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-26 14:51:23] 2026-02-26 13:50:48,987 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 14:51:23] 2026-02-26 13:50:48,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 14:51:23] 2026-02-26 13:50:48,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 14:51:23] 2026-02-26 13:51:16,828 | INFO     | [monitor] cgroup control has ended
[2026-02-26 14:51:23] 2026-02-26 13:51:18,676 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140602813003584)>', '<ExcThread(monitor, started 140602322708224)>']
[2026-02-26 14:51:23] 2026-02-26 13:51:19,132 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 14:51:23] 2026-02-26 13:51:19,132 | INFO     | [monitor] control thread has ended
[2026-02-26 14:51:23] 2026-02-26 13:51:23,701 | INFO     | all workflow threads have been joined
[2026-02-26 14:51:23] 2026-02-26 13:51:23,702 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 14:51:23] 2026-02-26 13:51:23,702 | INFO     | traces error code: 0
[2026-02-26 14:51:23] 2026-02-26 13:51:23,703 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 14:51:23] 2026-02-26 13:51:23,749 [wrapper] ==== pilot stdout END ====
[2026-02-26 14:51:23] 2026-02-26 13:51:23,752 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 14:51:23] 2026-02-26 13:51:23,754 [wrapper] pilotpid: 1331883
[2026-02-26 14:51:23] 2026-02-26 13:51:23,756 [wrapper] Pilot exit status: 0
[2026-02-26 14:51:23] 2026-02-26 13:51:23,763 [wrapper] pandaids: 7030349134
[2026-02-26 14:51:23] 2026-02-26 13:51:23,778 [wrapper] cleanup supervisor_pilot 1433008 1331884
[2026-02-26 14:51:23] 2026-02-26 13:51:23,781 [wrapper] Test setup, not cleaning
[2026-02-26 14:51:23] 2026-02-26 13:51:23,783 [wrapper] apfmon messages muted
[2026-02-26 14:51:23] 2026-02-26 13:51:23,785 [wrapper] ==== wrapper stdout END ====
[2026-02-26 14:51:23] 2026-02-26 13:51:23,787 [wrapper] ==== wrapper stderr END ====
[2026-02-26 14:51:23]  *** Error codes and diagnostics ***
[2026-02-26 14:51:23]     "exeErrorCode": 0,
[2026-02-26 14:51:23]     "exeErrorDiag": "",
[2026-02-26 14:51:23]     "pilotErrorCode": 0,
[2026-02-26 14:51:23]     "pilotErrorDiag": "",
[2026-02-26 14:51:23]  *** Listing of results directory ***
[2026-02-26 14:51:23] total 503408
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc    584627 Feb 25 21:36 pilot3.tar.gz
[2026-02-26 14:51:23] -rwx------ 1 boinc boinc     36322 Feb 25 21:37 runpilot2-wrapper.sh
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc      5111 Feb 25 21:38 queuedata.json
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc       100 Feb 26 12:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 14:51:23] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 12:07 run_atlas
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc       105 Feb 26 12:07 job.xml
[2026-02-26 14:51:23] -rw-r--r-- 2 boinc boinc 284112453 Feb 26 12:07 EVNT.48220165._000036.pool.root.1
[2026-02-26 14:51:23] -rw-r--r-- 2 boinc boinc    597954 Feb 26 12:07 input.tar.gz
[2026-02-26 14:51:23] -rw-r--r-- 2 boinc boinc     15845 Feb 26 12:07 start_atlas.sh
[2026-02-26 14:51:23] drwxrwx--x 2 boinc boinc      4096 Feb 26 12:07 shared
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc         0 Feb 26 12:07 boinc_setup_complete
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc      6205 Feb 26 12:07 init_data.xml
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc         0 Feb 26 12:07 boinc_lockfile
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc      2553 Feb 26 12:07 pandaJob.out
[2026-02-26 14:51:23] -rw------- 1 boinc boinc    997714 Feb 26 12:07 agis_schedconf.cvmfs.json
[2026-02-26 14:51:23] -rw------- 1 boinc boinc   1513015 Feb 26 12:07 agis_ddmendpoints.agis.ALL.json
[2026-02-26 14:51:23] -rw------- 1 boinc boinc       425 Feb 26 12:08 workernode_map.json
[2026-02-26 14:51:23] drwx------ 5 boinc boinc      4096 Feb 26 12:08 pilot3
[2026-02-26 14:51:23] -rw------- 1 boinc boinc 224067681 Feb 26 14:49 HITS.48838492._000889.pool.root.1
[2026-02-26 14:51:23] -rw------- 1 boinc boinc        95 Feb 26 14:49 pilot_heartbeat.json
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc       529 Feb 26 14:50 boinc_task_state.xml
[2026-02-26 14:51:23] -rw------- 1 boinc boinc      1032 Feb 26 14:50 memory_monitor_summary.json
[2026-02-26 14:51:23] -rw------- 1 boinc boinc    310913 Feb 26 14:50 log.48838492._000889.job.log.tgz.1
[2026-02-26 14:51:23] -rw------- 1 boinc boinc      6303 Feb 26 14:50 heartbeat.json
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc      8192 Feb 26 14:51 boinc_mmap_file
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc        27 Feb 26 14:51 wrapper_checkpoint.txt
[2026-02-26 14:51:23] -rw------- 1 boinc boinc      5006 Feb 26 14:51 pilotlog.txt
[2026-02-26 14:51:23] -rw------- 1 boinc boinc   1384698 Feb 26 14:51 log.48838492._000889.job.log.1
[2026-02-26 14:51:23] -rw------- 1 boinc boinc       357 Feb 26 14:51 output.list
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc       620 Feb 26 14:51 runtime_log
[2026-02-26 14:51:23] -rw------- 1 boinc boinc   1710080 Feb 26 14:51 result.tar.gz
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc      8896 Feb 26 14:51 runtime_log.err
[2026-02-26 14:51:23] -rw------- 1 boinc boinc       659 Feb 26 14:51 RuIMDmZoaF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmEYzKDmmyUu1n.diag
[2026-02-26 14:51:23] -rw-r--r-- 1 boinc boinc     10180 Feb 26 14:51 stderr.txt
[2026-02-26 14:51:23] HITS file was successfully produced:
[2026-02-26 14:51:23] -rw------- 1 boinc boinc 224067681 Feb 26 14:49 shared/HITS.pool.root.1
[2026-02-26 14:51:23]  *** Contents of shared directory: ***
[2026-02-26 14:51:23] total 498556
[2026-02-26 14:51:23] -rw-r--r-- 2 boinc boinc 284112453 Feb 26 12:07 ATLAS.root_0
[2026-02-26 14:51:23] -rw-r--r-- 2 boinc boinc    597954 Feb 26 12:07 input.tar.gz
[2026-02-26 14:51:23] -rw-r--r-- 2 boinc boinc     15845 Feb 26 12:07 start_atlas.sh
[2026-02-26 14:51:23] -rw------- 1 boinc boinc 224067681 Feb 26 14:49 HITS.pool.root.1
[2026-02-26 14:51:23] -rw------- 1 boinc boinc   1710080 Feb 26 14:51 result.tar.gz
14:51:25 (1327735): run_atlas exited; CPU time 18972.625972
14:51:25 (1327735): called boinc_finish(0)

</stderr_txt>
]]>

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