Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:02:19 (290545): wrapper (7.7.26015): starting
16:02:19 (290545): wrapper: running run_atlas (--nthreads 3)
[2026-02-26 16:02:19] Arguments: --nthreads 3
[2026-02-26 16:02:19] Threads: 3
[2026-02-26 16:02:19] Checking for CVMFS
[2026-02-26 16:02:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 16:02:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 16:02:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 16:02:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 16:02:19] 2.9.2.0 248554 303 56944 156657 1 50 22608907 36864000 0 130560 0 115416 99.979 12391 9309 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-26 16:02:19] CVMFS is ok
[2026-02-26 16:02:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 16:02:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 16:02:19] Further information can be found at the LHC@home message board.
[2026-02-26 16:02:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 16:02:19] Checking for apptainer binary...
[2026-02-26 16:02:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 16:02:19] Running /usr/bin/apptainer --version
[2026-02-26 16:02:19] apptainer version 1.4.1-1.1
[2026-02-26 16:02:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 16:02:19] atlasA115
[2026-02-26 16:02:19] apptainer works
[2026-02-26 16:02:19] Set ATHENA_PROC_NUMBER=3
[2026-02-26 16:02:19] Set ATHENA_CORE_NUMBER=3
[2026-02-26 16:02:19] Starting ATLAS job with PandaID=7030310884
[2026-02-26 16:02:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:42:27 (304688): wrapper (7.7.26015): starting
17:42:27 (304688): wrapper: running run_atlas (--nthreads 3)
[2026-02-26 17:42:27] Arguments: --nthreads 3
[2026-02-26 17:42:27] Threads: 3
[2026-02-26 17:42:27] This job has been restarted, cleaning up previous attempt
[2026-02-26 17:42:27] Checking for CVMFS
[2026-02-26 17:42:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 17:42:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 17:42:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 17:42:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 17:42:28] 2.9.2.0 304813 0 29712 156661 4 1 22626236 36864001 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-26 17:42:28] CVMFS is ok
[2026-02-26 17:42:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 17:42:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 17:42:28] Further information can be found at the LHC@home message board.
[2026-02-26 17:42:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 17:42:28] Checking for apptainer binary...
[2026-02-26 17:42:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 17:42:28] Running /usr/bin/apptainer --version
[2026-02-26 17:42:28] apptainer version 1.4.1-1.1
[2026-02-26 17:42:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 17:42:28] atlasA115
[2026-02-26 17:42:28] apptainer works
[2026-02-26 17:42:28] Set ATHENA_PROC_NUMBER=3
[2026-02-26 17:42:28] Set ATHENA_CORE_NUMBER=3
[2026-02-26 17:42:28] Starting ATLAS job with PandaID=7030310884
[2026-02-26 17:42:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 19:21:49]  *** The last 200 lines of the pilot log: ***
[2026-02-26 19:21:49] 2026-02-26 18:20:51,008 | INFO     | did not find any defunct processes belonging to 311289
[2026-02-26 19:21:49] 2026-02-26 18:20:51,008 | INFO     | ready for new job
[2026-02-26 19:21:49] 2026-02-26 18:20:51,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 19:21:49] 2026-02-26 18:20:51,009 | INFO     | **************************************
[2026-02-26 19:21:49] 2026-02-26 18:20:51,009 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 19:21:49] 2026-02-26 18:20:51,009 | INFO     | **************************************
[2026-02-26 19:21:49] 2026-02-26 18:20:51,009 | INFO     | 
[2026-02-26 19:21:49] 2026-02-26 18:20:51,009 | INFO     | architecture information:
[2026-02-26 19:21:49] 2026-02-26 18:20:51,010 | INFO     | executing command: cat /etc/os-release
[2026-02-26 19:21:49] 2026-02-26 18:20:51,019 | INFO     | cat /etc/os-release:
[2026-02-26 19:21:49] NAME="CentOS Linux"
[2026-02-26 19:21:49] VERSION="7 (Core)"
[2026-02-26 19:21:49] ID="centos"
[2026-02-26 19:21:49] ID_LIKE="rhel fedora"
[2026-02-26 19:21:49] VERSION_ID="7"
[2026-02-26 19:21:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 19:21:49] ANSI_COLOR="0;31"
[2026-02-26 19:21:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 19:21:49] HOME_URL="https://www.centos.org/"
[2026-02-26 19:21:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 19:21:49] 
[2026-02-26 19:21:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 19:21:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 19:21:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 19:21:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 19:21:49] 
[2026-02-26 19:21:49] 2026-02-26 18:20:51,019 | INFO     | **************************************
[2026-02-26 19:21:49] 2026-02-26 18:20:51,522 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-26 19:21:49] 2026-02-26 18:20:51,535 | INFO     | sufficient remaining disk space (334594310144 B)
[2026-02-26 19:21:49] 2026-02-26 18:20:51,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 19:21:49] 2026-02-26 18:20:51,536 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 19:21:49] 2026-02-26 18:20:51,536 | INFO     | update_server=False
[2026-02-26 19:21:49] 2026-02-26 18:20:51,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 19:21:49] 2026-02-26 18:20:51,536 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-26 19:21:49] 2026-02-26 18:20:51,536 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 19:21:49] 2026-02-26 18:20:51,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 19:21:49] 2026-02-26 18:20:51,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 19:21:49] 2026-02-26 18:20:51,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 19:21:49] 2026-02-26 18:20:51,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 19:21:49] 2026-02-26 18:20:51,536 | INFO     | aborting loop
[2026-02-26 19:21:49] 2026-02-26 18:20:51,597 | INFO     | all payload control threads have been joined
[2026-02-26 19:21:49] 2026-02-26 18:20:51,648 | INFO     | all data control threads have been joined
[2026-02-26 19:21:49] 2026-02-26 18:20:52,263 | INFO     | all job control threads have been joined
[2026-02-26 19:21:49] 2026-02-26 18:20:52,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 19:21:49] 2026-02-26 18:20:52,541 | INFO     | [job] retrieve thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:52,542 | INFO     | [job] queue monitor thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:52,542 | INFO     | [job] job monitor thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:52,602 | INFO     | [payload] control thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:52,654 | INFO     | [data] control thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:52,788 | INFO     | [payload] failed_post thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:53,230 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:53,269 | INFO     | [job] control thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:53,334 | INFO     | [job] validate thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:53,433 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:53,493 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:53,603 | INFO     | [data] copytool_in thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:53,657 | INFO     | [payload] validate_post thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:53,969 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 19:21:49] 2026-02-26 18:20:54,383 | INFO     | [data] copytool_out thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:20:57,976 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:21:02,444 | INFO     | job.realtimelogging is not enabled
[2026-02-26 19:21:49] 2026-02-26 18:21:03,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 19:21:49] 2026-02-26 18:21:42,977 | INFO     | [monitor] cgroup control has ended
[2026-02-26 19:21:49] 2026-02-26 18:21:44,313 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140311982569280)>', '<ExcThread(monitor, started 140311271565056)>']
[2026-02-26 19:21:49] 2026-02-26 18:21:44,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 19:21:49] 2026-02-26 18:21:44,805 | INFO     | [monitor] control thread has ended
[2026-02-26 19:21:49] 2026-02-26 18:21:49,339 | INFO     | all workflow threads have been joined
[2026-02-26 19:21:49] 2026-02-26 18:21:49,339 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 19:21:49] 2026-02-26 18:21:49,339 | INFO     | traces error code: 0
[2026-02-26 19:21:49] 2026-02-26 18:21:49,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 19:21:49] 2026-02-26 18:21:49,391 [wrapper] ==== pilot stdout END ====
[2026-02-26 19:21:49] 2026-02-26 18:21:49,394 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 19:21:49] 2026-02-26 18:21:49,396 [wrapper] pilotpid: 308889
[2026-02-26 19:21:49] 2026-02-26 18:21:49,398 [wrapper] Pilot exit status: 0
[2026-02-26 19:21:49] 2026-02-26 18:21:49,405 [wrapper] pandaids: 7030310884 7030310884
[2026-02-26 19:21:49] 2026-02-26 18:21:49,421 [wrapper] cleanup supervisor_pilot  316711 308890
[2026-02-26 19:21:49] 2026-02-26 18:21:49,423 [wrapper] Test setup, not cleaning
[2026-02-26 19:21:49] 2026-02-26 18:21:49,426 [wrapper] apfmon messages muted
[2026-02-26 19:21:49] 2026-02-26 18:21:49,428 [wrapper] ==== wrapper stdout END ====
[2026-02-26 19:21:49] 2026-02-26 18:21:49,430 [wrapper] ==== wrapper stderr END ====
[2026-02-26 19:21:49]  *** Error codes and diagnostics ***
[2026-02-26 19:21:49]     "exeErrorCode": 0,
[2026-02-26 19:21:49]     "exeErrorDiag": "",
[2026-02-26 19:21:49]     "pilotErrorCode": 0,
[2026-02-26 19:21:49]     "pilotErrorDiag": "",
[2026-02-26 19:21:49]  *** Listing of results directory ***
[2026-02-26 19:21:49] total 758108
[2026-02-26 19:21:49] drwx------ 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc    584627 Feb 25 16:36 pilot3.tar.gz
[2026-02-26 19:21:49] -rwx------ 1 boinc boinc     36322 Feb 25 16:40 runpilot2-wrapper.sh
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc      5111 Feb 25 16:44 queuedata.json
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc       100 Feb 26 16:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 19:21:49] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 16:02 run_atlas
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc       105 Feb 26 16:02 job.xml
[2026-02-26 19:21:49] -rw-r--r-- 3 boinc boinc 279104016 Feb 26 16:02 EVNT.48220221._000004.pool.root.1
[2026-02-26 19:21:49] -rw-r--r-- 3 boinc boinc 279104016 Feb 26 16:02 ATLAS.root_0
[2026-02-26 19:21:49] -rw-r--r-- 2 boinc boinc    597948 Feb 26 16:02 input.tar.gz
[2026-02-26 19:21:49] -rw-r--r-- 2 boinc boinc     15845 Feb 26 16:02 start_atlas.sh
[2026-02-26 19:21:49] drwxrwx--x 2 boinc boinc      4096 Feb 26 16:02 shared
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc         0 Feb 26 16:02 boinc_setup_complete
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc         0 Feb 26 16:02 boinc_lockfile
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc      6448 Feb 26 17:42 init_data.xml
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc      2557 Feb 26 17:42 pandaJob.out
[2026-02-26 19:21:49] -rw------- 1 boinc boinc    996541 Feb 26 17:42 agis_schedconf.cvmfs.json
[2026-02-26 19:21:49] -rw------- 1 boinc boinc       429 Feb 26 17:42 workernode_map.json
[2026-02-26 19:21:49] -rw------- 1 boinc boinc        96 Feb 26 19:20 pilot_heartbeat.json
[2026-02-26 19:21:49] -rw------- 1 boinc boinc 211956645 Feb 26 19:20 HITS.48838586._000078.pool.root.1
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc       531 Feb 26 19:20 boinc_task_state.xml
[2026-02-26 19:21:49] -rw------- 1 boinc boinc      1016 Feb 26 19:20 memory_monitor_summary.json
[2026-02-26 19:21:49] -rw------- 1 boinc boinc   1513015 Feb 26 19:20 agis_ddmendpoints.agis.ALL.json
[2026-02-26 19:21:49] -rw------- 1 boinc boinc    253798 Feb 26 19:20 log.48838586._000078.job.log.tgz.1
[2026-02-26 19:21:49] -rw------- 1 boinc boinc      6303 Feb 26 19:20 heartbeat.json
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc      8192 Feb 26 19:21 boinc_mmap_file
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc        28 Feb 26 19:21 wrapper_checkpoint.txt
[2026-02-26 19:21:49] -rw------- 1 boinc boinc      4624 Feb 26 19:21 pilotlog.txt
[2026-02-26 19:21:49] -rw------- 1 boinc boinc    852286 Feb 26 19:21 log.48838586._000078.job.log.1
[2026-02-26 19:21:49] -rw------- 1 boinc boinc       357 Feb 26 19:21 output.list
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc       620 Feb 26 19:21 runtime_log
[2026-02-26 19:21:49] -rw------- 1 boinc boinc   1126400 Feb 26 19:21 result.tar.gz
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc      8996 Feb 26 19:21 runtime_log.err
[2026-02-26 19:21:49] -rw------- 1 boinc boinc       785 Feb 26 19:21 iobNDmRBWF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm2g0KDmqgFOfn.diag
[2026-02-26 19:21:49] -rw-r--r-- 1 boinc boinc     11764 Feb 26 19:21 stderr.txt
[2026-02-26 19:21:49] HITS file was successfully produced:
[2026-02-26 19:21:49] -rw------- 1 boinc boinc 211956645 Feb 26 19:20 shared/HITS.pool.root.1
[2026-02-26 19:21:49]  *** Contents of shared directory: ***
[2026-02-26 19:21:49] total 481264
[2026-02-26 19:21:49] -rw-r--r-- 3 boinc boinc 279104016 Feb 26 16:02 ATLAS.root_0
[2026-02-26 19:21:49] -rw-r--r-- 2 boinc boinc    597948 Feb 26 16:02 input.tar.gz
[2026-02-26 19:21:49] -rw-r--r-- 2 boinc boinc     15845 Feb 26 16:02 start_atlas.sh
[2026-02-26 19:21:49] -rw------- 1 boinc boinc 211956645 Feb 26 19:20 HITS.pool.root.1
[2026-02-26 19:21:49] -rw------- 1 boinc boinc   1126400 Feb 26 19:21 result.tar.gz
19:21:51 (304688): run_atlas exited; CPU time 16891.648572
19:21:51 (304688): called boinc_finish(0)

</stderr_txt>
]]>

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