Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:43:31 (3520065): wrapper (7.7.26015): starting
20:43:31 (3520065): wrapper: running run_atlas (--nthreads 12)
[2026-02-25 20:43:31] Arguments: --nthreads 12
[2026-02-25 20:43:31] Threads: 12
[2026-02-25 20:43:31] Checking for CVMFS
[2026-02-25 20:43:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-25 20:43:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-25 20:43:32] Running cvmfs_config stat atlas.cern.ch
[2026-02-25 20:43:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-25 20:43:33] 2.11.5.0 2324609 125207 208212 156642 2 265 40115603 45568001 17648 130560 0 760073666 99.795 473586580 18059 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-25 20:43:33] CVMFS is ok
[2026-02-25 20:43:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-25 20:43:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-25 20:43:33] Further information can be found at the LHC@home message board.
[2026-02-25 20:43:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-25 20:43:33] Checking for apptainer binary...
[2026-02-25 20:43:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-25 20:43:33] Running /usr/bin/apptainer --version
[2026-02-25 20:43:33] apptainer version 1.4.1-1.el9
[2026-02-25 20:43:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-25 20:43:33] wns0073.triumf.lcg
[2026-02-25 20:43:33] apptainer works
[2026-02-25 20:43:34] Set ATHENA_PROC_NUMBER=12
[2026-02-25 20:43:34] Set ATHENA_CORE_NUMBER=12
[2026-02-25 20:43:34] Starting ATLAS job with PandaID=7030454490
[2026-02-25 20:43:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-25 20:48:52]  *** The last 200 lines of the pilot log: ***
[2026-02-25 20:48:52] 2026-02-26 04:48:18,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | WARNING  | wrong length of table data, x=[1772081143.0], y=[26255.0] (must be same and length>=4)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | could have reported an average CPU frequency of 1454 MHz (4 samples)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | ..............................
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . Timing measurements:
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . get job = 0 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . initial setup = 27 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . payload setup = 33 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . stage-in = 0 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . payload execution = 63 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | . stage-out = 2 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | . log creation = 0 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | ..............................
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030454490/pilotlog.txt
[2026-02-25 20:48:52] 2026-02-26 04:48:18,289 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-25 20:48:52] - Log from pilotlog.txt -
[2026-02-25 20:48:52] 2026-02-26 04:48:18,221 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7030454490/memory_monitor_summary.json (trf name=prmon)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,228 | INFO     | extracted standard info from prmon json
[2026-02-25 20:48:52] 2026-02-26 04:48:18,228 | INFO     | extracted standard memory fields from prmon json
[2026-02-25 20:48:52] 2026-02-26 04:48:18,228 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-25 20:48:52] 2026-02-26 04:48:18,228 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 20:48:52] 2026-02-26 04:48:18,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | WARNING  | wrong length of table data, x=[1772081143.0], y=[26255.0] (must be same and length>=4)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | could have reported an average CPU frequency of 1454 MHz (4 samples)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | ..............................
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . Timing measurements:
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . get job = 0 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . initial setup = 27 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . payload setup = 33 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . stage-in = 0 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . payload execution = 63 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | . stage-out = 2 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | . log creation = 0 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | ..............................
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030454490/pilotlog.txt
[2026-02-25 20:48:52] 2026-02-26 04:48:18,290 | WARNING  | 
[2026-02-25 20:48:52] [begin log extracts]
[2026-02-25 20:48:52] - Log from pilotlog.txt -
[2026-02-25 20:48:52] 2026-02-26 04:48:18,221 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7030454490/memory_monitor_summary.json (trf name=prmon)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,228 | INFO     | extracted standard info from prmon json
[2026-02-25 20:48:52] 2026-02-26 04:48:18,228 | INFO     | extracted standard memory fields from prmon json
[2026-02-25 20:48:52] 2026-02-26 04:48:18,228 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-25 20:48:52] 2026-02-26 04:48:18,228 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 20:48:52] 2026-02-26 04:48:18,228 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | WARNING  | wrong length of table data, x=[1772081143.0], y=[26255.0] (must be same and length>=4)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | could have reported an average CPU frequency of 1454 MHz (4 samples)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | ..............................
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . Timing measurements:
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . get job = 0 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . initial setup = 27 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . payload setup = 33 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . stage-in = 0 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,229 | INFO     | . payload execution = 63 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | . stage-out = 2 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | . log creation = 0 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | ..............................
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-25 20:48:52] 2026-02-26 04:48:18,230 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030454490/pilotlog.txt
[2026-02-25 20:48:52] [end log extracts]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,290 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,291 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-25 20:48:52] 2026-02-26 04:48:18,326 | INFO     | time since job start (236s) is within the limit (349056.0s)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,783 | INFO     | 
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | job summary report
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | --------------------------------------------------
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | PanDA job id: 7030454490
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | task id: 48838416
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-25 20:46:06,518 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | pilot state: failed 
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | transexitcode: 65
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | exeerrorcode: 65
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | exitcode: 65
[2026-02-25 20:48:52] 2026-02-26 04:48:18,784 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,785 | INFO     | cpuconsumptiontime: 21 s
[2026-02-25 20:48:52] 2026-02-26 04:48:18,785 | INFO     | nevents: 0
[2026-02-25 20:48:52] 2026-02-26 04:48:18,785 | INFO     | neventsw: 0
[2026-02-25 20:48:52] 2026-02-26 04:48:18,785 | INFO     | pid: 3528637
[2026-02-25 20:48:52] 2026-02-26 04:48:18,785 | INFO     | pgrp: 3528637
[2026-02-25 20:48:52] 2026-02-26 04:48:18,785 | INFO     | corecount: 12
[2026-02-25 20:48:52] 2026-02-26 04:48:18,785 | INFO     | event service: False
[2026-02-25 20:48:52] 2026-02-26 04:48:18,785 | INFO     | sizes: {0: 2281843, 1: 2281871, 2: 2282332, 13: 2282332, 102: 2305627, 103: 2305603, 106: 2310051, 107: 2310079, 224: 2310245}
[2026-02-25 20:48:52] 2026-02-26 04:48:18,785 | INFO     | --------------------------------------------------
[2026-02-25 20:48:52] 2026-02-26 04:48:18,785 | INFO     | 
[2026-02-25 20:48:52] 2026-02-26 04:48:18,785 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-25 20:48:52] 2026-02-26 04:48:18,847 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,848 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,848 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,848 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,848 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,849 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,849 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,849 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,849 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,849 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,849 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,849 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,849 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,849 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,849 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-25 20:48:52] 2026-02-26 04:48:18,850 | INFO     | job 7030454490 has completed (purged errors)
[2026-02-25 20:48:52] 2026-02-26 04:48:18,850 | INFO     | overall cleanup function is called
[2026-02-25 20:48:52] 2026-02-26 04:48:19,878 | INFO     | --- collectZombieJob: --- 10, [3528637]
[2026-02-25 20:48:52] 2026-02-26 04:48:19,878 | INFO     | zombie collector waiting for pid 3528637
[2026-02-25 20:48:52] 2026-02-26 04:48:19,878 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-25 20:48:52] 2026-02-26 04:48:19,878 | INFO     | collected zombie processes
[2026-02-25 20:48:52] 2026-02-26 04:48:19,878 | INFO     | will attempt to kill all subprocesses of pid=3528637
[2026-02-25 20:48:52] 2026-02-26 04:48:20,882 | INFO     | process IDs to be killed: [3528637] (in reverse order)
[2026-02-25 20:48:52] 2026-02-26 04:48:20,988 | WARNING  | found no corresponding commands to process id(s)
[2026-02-25 20:48:52] 2026-02-26 04:48:20,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-25 20:48:52] 2026-02-26 04:48:21,007 | INFO     | did not find any defunct processes belonging to 3528637
[2026-02-25 20:48:52] 2026-02-26 04:48:21,017 | INFO     | did not find any defunct processes belonging to 3528637
[2026-02-25 20:48:52] 2026-02-26 04:48:21,017 | INFO     | ready for new job
[2026-02-25 20:48:52] 2026-02-26 04:48:21,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-25 20:48:52] 2026-02-26 04:48:21,019 | INFO     | **************************************
[2026-02-25 20:48:52] 2026-02-26 04:48:21,019 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-25 20:48:52] 2026-02-26 04:48:21,019 | INFO     | **************************************
[2026-02-25 20:48:52] 2026-02-26 04:48:21,019 | INFO     | 
[2026-02-25 20:48:52] 2026-02-26 04:48:21,022 | INFO     | architecture information:
[2026-02-25 20:48:52] 2026-02-26 04:48:21,023 | INFO     | executing command: cat /etc/os-release
[2026-02-25 20:48:52] 2026-02-26 04:48:21,038 | INFO     | cat /etc/os-release:
[2026-02-25 20:48:52] NAME="CentOS Linux"
[2026-02-25 20:48:52] VERSION="7 (Core)"
[2026-02-25 20:48:52] ID="centos"
[2026-02-25 20:48:52] ID_LIKE="rhel fedora"
[2026-02-25 20:48:52] VERSION_ID="7"
[2026-02-25 20:48:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-25 20:48:52] ANSI_COLOR="0;31"
[2026-02-25 20:48:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-25 20:48:52] HOME_URL="https://www.centos.org/"
[2026-02-25 20:48:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-25 20:48:52] 
[2026-02-25 20:48:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-25 20:48:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-25 20:48:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-25 20:48:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-25 20:48:52] 
[2026-02-25 20:48:52] 2026-02-26 04:48:21,038 | INFO     | **************************************
[2026-02-25 20:48:52] 2026-02-26 04:48:21,542 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-25 20:48:52] 2026-02-26 04:48:21,605 | INFO     | sufficient remaining disk space (1368097030144 B)
[2026-02-25 20:48:52] 2026-02-26 04:48:21,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-25 20:48:52] 2026-02-26 04:48:21,606 | INFO     | current server update state: UPDATING_FINAL
[2026-02-25 20:48:52] 2026-02-26 04:48:21,606 | INFO     | update_server=False
[2026-02-25 20:48:52] 2026-02-26 04:48:21,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-25 20:48:52] 2026-02-26 04:48:21,607 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-25 20:48:52] 2026-02-26 04:48:21,700 | INFO     | all job control threads have been joined
[2026-02-25 20:48:52] 2026-02-26 04:48:21,707 | INFO     | [monitor] cgroup control has ended
[2026-02-25 20:48:52] 2026-02-26 04:48:22,016 | INFO     | all data control threads have been joined
[2026-02-25 20:48:52] 2026-02-26 04:48:22,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-25 20:48:52] 2026-02-26 04:48:22,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-25 20:48:52] 2026-02-26 04:48:22,588 | INFO     | aborting loop
[2026-02-25 20:48:52] 2026-02-26 04:48:22,618 | INFO     | [job] retrieve thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:22,706 | INFO     | [job] control thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:23,022 | INFO     | [data] control thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:23,075 | INFO     | all payload control threads have been joined
[2026-02-25 20:48:52] 2026-02-26 04:48:23,311 | INFO     | [job] create_data_payload thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:23,360 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:23,513 | INFO     | [payload] execute_payloads thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:23,523 | INFO     | [payload] failed_post thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:23,594 | INFO     | [job] job monitor thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:23,601 | INFO     | [payload] validate_post thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:23,787 | INFO     | [job] validate thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:23,787 | INFO     | [payload] validate_pre thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:23,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-25 20:48:52] 2026-02-26 04:48:23,888 | INFO     | [data] copytool_in thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:24,081 | INFO     | [payload] control thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:24,240 | INFO     | [data] copytool_out thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:24,816 | INFO     | [job] queue monitor thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:25,642 | INFO     | [data] queue_monitor thread has finished
[2026-02-25 20:48:52] 2026-02-26 04:48:27,302 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903859480384)>', '<ExcThread(monitor, started 139903325173504)>']
[2026-02-25 20:48:52] 2026-02-26 04:48:32,328 | INFO     | all workflow threads have been joined
[2026-02-25 20:48:52] 2026-02-26 04:48:32,328 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-25 20:48:52] 2026-02-26 04:48:32,328 | INFO     | traces error code: 0
[2026-02-25 20:48:52] 2026-02-26 04:48:32,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-25 20:48:52] 2026-02-26 04:48:52,293 | INFO     | PID=3523924 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-25 20:48:52] 2026-02-26 04:48:52,293 | INFO     | .. there are 28 such processes running
[2026-02-25 20:48:52] 2026-02-26 04:48:52,293 | INFO     | found 0 job(s) in 20 queues
[2026-02-25 20:48:52] 2026-02-26 04:48:52,293 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-25 20:48:52] 2026-02-26 04:48:52,293 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-25 20:48:52] 2026-02-26 04:48:52,294 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-25 20:48:52] 2026-02-26 04:48:52,294 | CRITICAL | thread 'MainThread' is not alive
[2026-02-25 20:48:52] 2026-02-26 04:48:52,294 | INFO     | [monitor] control thread has ended
[2026-02-25 20:48:52] 2026-02-26 04:48:52,407 [wrapper] ==== pilot stdout END ====
[2026-02-25 20:48:52] 2026-02-26 04:48:52,410 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-25 20:48:52] 2026-02-26 04:48:52,412 [wrapper] pilotpid: 3523924
[2026-02-25 20:48:52] 2026-02-26 04:48:52,415 [wrapper] Pilot exit status: 0
[2026-02-25 20:48:52] 2026-02-26 04:48:52,429 [wrapper] pandaids: 7030454490
[2026-02-25 20:48:52] 2026-02-26 04:48:52,495 [wrapper] cleanup supervisor_pilot 3523930 3523925
[2026-02-25 20:48:52] 2026-02-26 04:48:52,498 [wrapper] Test setup, not cleaning
[2026-02-25 20:48:52] 2026-02-26 04:48:52,500 [wrapper] apfmon messages muted
[2026-02-25 20:48:52] 2026-02-26 04:48:52,503 [wrapper] ==== wrapper stdout END ====
[2026-02-25 20:48:52] 2026-02-26 04:48:52,506 [wrapper] ==== wrapper stderr END ====
[2026-02-25 20:48:52]  *** Error codes and diagnostics ***
[2026-02-25 20:48:52]     "exeErrorCode": 65,
[2026-02-25 20:48:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-25 20:48:52]     "pilotErrorCode": 1305,
[2026-02-25 20:48:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-25 20:48:52]  *** Listing of results directory ***
[2026-02-25 20:48:52] total 285156
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc    584627 Feb 25 16:40 pilot3.tar.gz
[2026-02-25 20:48:52] -rwx------. 1 boinc boinc     36322 Feb 25 16:42 runpilot2-wrapper.sh
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc      5111 Feb 25 16:43 queuedata.json
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc       100 Feb 25 20:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-25 20:48:52] -rwxr-xr-x. 1 boinc boinc      7986 Feb 25 20:43 run_atlas
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc       105 Feb 25 20:43 job.xml
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc      6593 Feb 25 20:43 init_data.xml
[2026-02-25 20:48:52] -rw-r--r--. 2 boinc boinc 287852205 Feb 25 20:43 EVNT.48220085._000189.pool.root.1
[2026-02-25 20:48:52] -rw-r--r--. 2 boinc boinc     15845 Feb 25 20:43 start_atlas.sh
[2026-02-25 20:48:52] drwxrwx--x. 2 boinc boinc      4096 Feb 25 20:43 shared
[2026-02-25 20:48:52] -rw-r--r--. 2 boinc boinc    597967 Feb 25 20:43 input.tar.gz
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc         0 Feb 25 20:43 boinc_lockfile
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc      2567 Feb 25 20:43 pandaJob.out
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc    997632 Feb 25 20:43 agis_schedconf.cvmfs.json
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc   1513015 Feb 25 20:43 agis_ddmendpoints.agis.ALL.json
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc       445 Feb 25 20:44 workernode_map.json
[2026-02-25 20:48:52] drwx------. 5 boinc boinc      4096 Feb 25 20:44 pilot3
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc       525 Feb 25 20:46 boinc_task_state.xml
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc       966 Feb 25 20:46 memory_monitor_summary.json
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc     22178 Feb 25 20:46 log.48838416._004526.job.log.tgz.1
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc        95 Feb 25 20:47 pilot_heartbeat.json
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc      7033 Feb 25 20:48 heartbeat.json
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc        23 Feb 25 20:48 wrapper_checkpoint.txt
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc      8192 Feb 25 20:48 boinc_mmap_file
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc       893 Feb 25 20:48 pilotlog.txt
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc     88312 Feb 25 20:48 log.48838416._004526.job.log.1
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc       188 Feb 25 20:48 output.list
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc       620 Feb 25 20:48 runtime_log
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc    133120 Feb 25 20:48 result.tar.gz
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc       643 Feb 25 20:48 hoYNDmXdeF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmuvzKDmTqqdhm.diag
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc      8635 Feb 25 20:48 runtime_log.err
[2026-02-25 20:48:52] -rw-r--r--. 1 boinc boinc     21823 Feb 25 20:48 stderr.txt
[2026-02-25 20:48:52] No HITS result produced
[2026-02-25 20:48:52]  *** Contents of shared directory: ***
[2026-02-25 20:48:52] total 281844
[2026-02-25 20:48:52] -rw-r--r--. 2 boinc boinc 287852205 Feb 25 20:43 ATLAS.root_0
[2026-02-25 20:48:52] -rw-r--r--. 2 boinc boinc     15845 Feb 25 20:43 start_atlas.sh
[2026-02-25 20:48:52] -rw-r--r--. 2 boinc boinc    597967 Feb 25 20:43 input.tar.gz
[2026-02-25 20:48:52] -rw-------. 1 boinc boinc    133120 Feb 25 20:48 result.tar.gz
20:48:54 (3520065): run_atlas exited; CPU time 30.857820
20:48:54 (3520065): called boinc_finish(0)

</stderr_txt>
]]>

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