Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
08:26:16 (873927): wrapper (7.7.26015): starting
08:26:16 (873927): wrapper: running run_atlas (--nthreads 4)
[2026-02-26 08:26:16] Arguments: --nthreads 4
[2026-02-26 08:26:16] Threads: 4
[2026-02-26 08:26:16] Checking for CVMFS
[2026-02-26 08:26:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 08:26:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 08:26:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 08:26:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 08:26:17] 2.11.0.0 9972 1124 98724 156649 1 51 3085273 4096000 6454 130560 0 2662460 99.996 47961 722 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-26 08:26:17] CVMFS is ok
[2026-02-26 08:26:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 08:26:17] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-26 08:26:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-26 08:26:17] Further information can be found at the LHC@home message board.
[2026-02-26 08:26:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 08:26:17] Checking for apptainer binary...
[2026-02-26 08:26:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 08:26:17] Running /usr/bin/apptainer --version
[2026-02-26 08:26:17] apptainer version 1.4.5
[2026-02-26 08:26:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 08:26:17] x32-linux2
[2026-02-26 08:26:17] apptainer works
[2026-02-26 08:26:17] Set ATHENA_PROC_NUMBER=4
[2026-02-26 08:26:17] Set ATHENA_CORE_NUMBER=4
[2026-02-26 08:26:17] Starting ATLAS job with PandaID=7030348235
[2026-02-26 08:26:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 10:51:51]  *** The last 200 lines of the pilot log: ***
[2026-02-26 10:51:51] 2026-02-26 15:51:09,729 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 10:51:51] 2026-02-26 15:51:09,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 10:51:51] 2026-02-26 15:51:09,731 | INFO     | fitting pss+swap vs Time
[2026-02-26 10:51:51] 2026-02-26 15:51:09,731 | INFO     | sum of square deviations: 887813855.5
[2026-02-26 10:51:51] 2026-02-26 15:51:09,732 | INFO     | sum of deviations: 1077318010.9999967
[2026-02-26 10:51:51] 2026-02-26 15:51:09,732 | INFO     | mean x: 1772116710.5
[2026-02-26 10:51:51] 2026-02-26 15:51:09,732 | INFO     | mean y: 2347128.0704225353
[2026-02-26 10:51:51] 2026-02-26 15:51:09,732 | INFO     | intersect: -2148028469.2337317
[2026-02-26 10:51:51] 2026-02-26 15:51:09,732 | INFO     | chi2: 1.1583554162967058
[2026-02-26 10:51:51] 2026-02-26 15:51:09,733 | INFO     | sum of square deviations: 797291228.0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,733 | INFO     | sum of deviations: 960992474.9999993
[2026-02-26 10:51:51] 2026-02-26 15:51:09,733 | INFO     | mean x: 1772116558.0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,733 | INFO     | mean y: 2346932.02189781
[2026-02-26 10:51:51] 2026-02-26 15:51:09,733 | INFO     | intersect: -2133623736.2279475
[2026-02-26 10:51:51] 2026-02-26 15:51:09,733 | INFO     | chi2: 1.1583332784519909
[2026-02-26 10:51:51] 2026-02-26 15:51:09,733 | INFO     | current chi2=1.1583332784519909 (change=0.00191114440382362 %)
[2026-02-26 10:51:51] 2026-02-26 15:51:09,734 | INFO     | right removable region: 136
[2026-02-26 10:51:51] 2026-02-26 15:51:09,734 | INFO     | sum of square deviations: 797291228.0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,734 | INFO     | sum of deviations: -9017134802.0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,734 | INFO     | mean x: 1772116863.0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,734 | INFO     | mean y: 2363521.4890510947
[2026-02-26 10:51:51] 2026-02-26 15:51:09,734 | INFO     | intersect: 20044496279.744316
[2026-02-26 10:51:51] 2026-02-26 15:51:09,735 | INFO     | chi2: 0.06183169877499629
[2026-02-26 10:51:51] 2026-02-26 15:51:09,735 | INFO     | current chi2=0.06183169877499629 (change=94.66211338030655 %)
[2026-02-26 10:51:51] 2026-02-26 15:51:09,735 | INFO     | sum of square deviations: 713140813.0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,735 | INFO     | sum of deviations: -3551664335.5000005
[2026-02-26 10:51:51] 2026-02-26 15:51:09,735 | INFO     | mean x: 1772117015.5
[2026-02-26 10:51:51] 2026-02-26 15:51:09,735 | INFO     | mean y: 2353675.507575758
[2026-02-26 10:51:51] 2026-02-26 15:51:09,736 | INFO     | intersect: 8828050771.438686
[2026-02-26 10:51:51] 2026-02-26 15:51:09,736 | INFO     | chi2: 0.007002389906156622
[2026-02-26 10:51:51] 2026-02-26 15:51:09,736 | INFO     | current chi2=0.007002389906156622 (change=88.67508083250614 %)
[2026-02-26 10:51:51] 2026-02-26 15:51:09,736 | INFO     | sum of square deviations: 635130048.0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,736 | INFO     | sum of deviations: -2333741110.9999995
[2026-02-26 10:51:51] 2026-02-26 15:51:09,736 | INFO     | mean x: 1772117168.0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,737 | INFO     | mean y: 2351306.244094488
[2026-02-26 10:51:51] 2026-02-26 15:51:09,737 | INFO     | intersect: 6513872374.241956
[2026-02-26 10:51:51] 2026-02-26 15:51:09,737 | INFO     | chi2: 0.004839584150005312
[2026-02-26 10:51:51] 2026-02-26 15:51:09,737 | INFO     | current chi2=0.004839584150005312 (change=30.88667990695197 %)
[2026-02-26 10:51:51] 2026-02-26 15:51:09,737 | INFO     | sum of square deviations: 563026370.5
[2026-02-26 10:51:51] 2026-02-26 15:51:09,737 | INFO     | sum of deviations: -1602381122.9999993
[2026-02-26 10:51:51] 2026-02-26 15:51:09,737 | INFO     | mean x: 1772117320.5
[2026-02-26 10:51:51] 2026-02-26 15:51:09,738 | INFO     | mean y: 2349760.868852459
[2026-02-26 10:51:51] 2026-02-26 15:51:09,738 | INFO     | intersect: 5045821063.267715
[2026-02-26 10:51:51] 2026-02-26 15:51:09,738 | INFO     | chi2: 0.0042238249489978475
[2026-02-26 10:51:51] 2026-02-26 15:51:09,738 | INFO     | current chi2=0.0042238249489978475 (change=12.723390727833273 %)
[2026-02-26 10:51:51] 2026-02-26 15:51:09,738 | INFO     | left removable region: 40
[2026-02-26 10:51:51] 2026-02-26 15:51:09,738 | INFO     | sum of square deviations: 274312120.0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,738 | INFO     | sum of deviations: 564406983.5000001
[2026-02-26 10:51:51] 2026-02-26 15:51:09,738 | INFO     | mean x: 1772117747.5
[2026-02-26 10:51:51] 2026-02-26 15:51:09,738 | INFO     | mean y: 2343064.3020833335
[2026-02-26 10:51:51] 2026-02-26 15:51:09,739 | INFO     | intersect: -3643852489.409834
[2026-02-26 10:51:51] 2026-02-26 15:51:09,739 | INFO     | chi2: 0.0005162004672474405
[2026-02-26 10:51:51] 2026-02-26 15:51:09,739 | INFO     | current memory leak: 2.06 B/s (using 96 data points, chi2=0.00)
[2026-02-26 10:51:51] 2026-02-26 15:51:09,739 | INFO     | could have reported an average CPU frequency of 3859 MHz (8 samples)
[2026-02-26 10:51:51] 2026-02-26 15:51:09,739 | INFO     | ..............................
[2026-02-26 10:51:51] 2026-02-26 15:51:09,739 | INFO     | . Timing measurements:
[2026-02-26 10:51:51] 2026-02-26 15:51:09,739 | INFO     | . get job = 0 s
[2026-02-26 10:51:51] 2026-02-26 15:51:09,739 | INFO     | . initial setup = 5 s
[2026-02-26 10:51:51] 2026-02-26 15:51:09,739 | INFO     | . payload setup = 4 s
[2026-02-26 10:51:51] 2026-02-26 15:51:09,739 | INFO     | . stage-in = 0 s
[2026-02-26 10:51:51] 2026-02-26 15:51:09,739 | INFO     | . payload execution = 8658 s
[2026-02-26 10:51:51] 2026-02-26 15:51:09,740 | INFO     | . stage-out = 0 s
[2026-02-26 10:51:51] 2026-02-26 15:51:09,740 | INFO     | . log creation = 0 s
[2026-02-26 10:51:51] 2026-02-26 15:51:09,740 | INFO     | ..............................
[2026-02-26 10:51:51] 2026-02-26 15:51:09,800 | INFO     | 
[2026-02-26 10:51:51] 2026-02-26 15:51:09,800 | INFO     | job summary report
[2026-02-26 10:51:51] 2026-02-26 15:51:09,800 | INFO     | --------------------------------------------------
[2026-02-26 10:51:51] 2026-02-26 15:51:09,800 | INFO     | PanDA job id: 7030348235
[2026-02-26 10:51:51] 2026-02-26 15:51:09,800 | INFO     | task id: 48838492
[2026-02-26 10:51:51] 2026-02-26 15:51:09,800 | INFO     | errors: (none)
[2026-02-26 10:51:51] 2026-02-26 15:51:09,800 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 10:51:51] 2026-02-26 15:51:09,800 | INFO     | pilot state: finished 
[2026-02-26 10:51:51] 2026-02-26 15:51:09,800 | INFO     | transexitcode: 0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,800 | INFO     | exeerrorcode: 0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | exeerrordiag: 
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | exitcode: 0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | exitmsg: OK
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | cpuconsumptiontime: 33574 s
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | nevents: 400
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | neventsw: 0
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | pid: 882675
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | pgrp: 882675
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | corecount: 4
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | event service: False
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | sizes: {0: 2281888, 1: 2282292, 11: 2282292, 8666: 2319374, 8667: 2319568}
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | --------------------------------------------------
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | 
[2026-02-26 10:51:51] 2026-02-26 15:51:09,801 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-02-26 10:51:51] 2026-02-26 15:51:09,815 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,815 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,815 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,815 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | job 7030348235 has completed (purged errors)
[2026-02-26 10:51:51] 2026-02-26 15:51:09,816 | INFO     | overall cleanup function is called
[2026-02-26 10:51:51] 2026-02-26 15:51:10,822 | INFO     | --- collectZombieJob: --- 10, [882675]
[2026-02-26 10:51:51] 2026-02-26 15:51:10,822 | INFO     | zombie collector waiting for pid 882675
[2026-02-26 10:51:51] 2026-02-26 15:51:10,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 10:51:51] 2026-02-26 15:51:10,822 | INFO     | collected zombie processes
[2026-02-26 10:51:51] 2026-02-26 15:51:10,822 | INFO     | will attempt to kill all subprocesses of pid=882675
[2026-02-26 10:51:51] 2026-02-26 15:51:10,965 | INFO     | process IDs to be killed: [882675] (in reverse order)
[2026-02-26 10:51:51] 2026-02-26 15:51:11,015 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 10:51:51] 2026-02-26 15:51:11,016 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 10:51:51] 2026-02-26 15:51:11,020 | INFO     | did not find any defunct processes belonging to 882675
[2026-02-26 10:51:51] 2026-02-26 15:51:11,023 | INFO     | did not find any defunct processes belonging to 882675
[2026-02-26 10:51:51] 2026-02-26 15:51:11,023 | INFO     | ready for new job
[2026-02-26 10:51:51] 2026-02-26 15:51:11,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 10:51:51] 2026-02-26 15:51:11,025 | INFO     | **************************************
[2026-02-26 10:51:51] 2026-02-26 15:51:11,025 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 10:51:51] 2026-02-26 15:51:11,025 | INFO     | **************************************
[2026-02-26 10:51:51] 2026-02-26 15:51:11,025 | INFO     | 
[2026-02-26 10:51:51] 2026-02-26 15:51:11,026 | INFO     | architecture information:
[2026-02-26 10:51:51] 2026-02-26 15:51:11,026 | INFO     | executing command: cat /etc/os-release
[2026-02-26 10:51:51] 2026-02-26 15:51:11,037 | INFO     | cat /etc/os-release:
[2026-02-26 10:51:51] NAME="CentOS Linux"
[2026-02-26 10:51:51] VERSION="7 (Core)"
[2026-02-26 10:51:51] ID="centos"
[2026-02-26 10:51:51] ID_LIKE="rhel fedora"
[2026-02-26 10:51:51] VERSION_ID="7"
[2026-02-26 10:51:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 10:51:51] ANSI_COLOR="0;31"
[2026-02-26 10:51:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 10:51:51] HOME_URL="https://www.centos.org/"
[2026-02-26 10:51:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 10:51:51] 
[2026-02-26 10:51:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 10:51:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 10:51:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 10:51:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 10:51:51] 
[2026-02-26 10:51:51] 2026-02-26 15:51:11,037 | INFO     | **************************************
[2026-02-26 10:51:51] 2026-02-26 15:51:11,540 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-02-26 10:51:51] 2026-02-26 15:51:11,552 | INFO     | sufficient remaining disk space (404435763200 B)
[2026-02-26 10:51:51] 2026-02-26 15:51:11,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 10:51:51] 2026-02-26 15:51:11,552 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 10:51:51] 2026-02-26 15:51:11,552 | INFO     | update_server=False
[2026-02-26 10:51:51] 2026-02-26 15:51:11,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 10:51:51] 2026-02-26 15:51:11,553 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 10:51:51] 2026-02-26 15:51:11,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 10:51:51] 2026-02-26 15:51:11,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 10:51:51] 2026-02-26 15:51:11,880 | INFO     | all payload control threads have been joined
[2026-02-26 10:51:51] 2026-02-26 15:51:12,369 | INFO     | all data control threads have been joined
[2026-02-26 10:51:51] 2026-02-26 15:51:12,390 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 10:51:51] 2026-02-26 15:51:12,390 | INFO     | aborting loop
[2026-02-26 10:51:51] 2026-02-26 15:51:12,557 | INFO     | [job] retrieve thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:12,557 | INFO     | [job] queue monitor thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:12,597 | INFO     | all job control threads have been joined
[2026-02-26 10:51:51] 2026-02-26 15:51:12,660 | INFO     | [data] copytool_in thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:12,832 | INFO     | [payload] failed_post thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:12,885 | INFO     | [payload] control thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:13,372 | INFO     | [data] control thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:13,395 | INFO     | [job] job monitor thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:13,602 | INFO     | [job] control thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:13,660 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:13,775 | INFO     | [job] validate thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:13,806 | INFO     | [data] copytool_out thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:13,815 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:14,030 | INFO     | [payload] validate_post thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:14,039 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:15,558 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:22,383 | INFO     | job.realtimelogging is not enabled
[2026-02-26 10:51:51] 2026-02-26 15:51:23,383 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 10:51:51] 2026-02-26 15:51:41,436 | INFO     | PID=878105 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-26 10:51:51] 2026-02-26 15:51:41,436 | INFO     | .. there are 8 such processes running
[2026-02-26 10:51:51] 2026-02-26 15:51:41,436 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 10:51:51] 2026-02-26 15:51:41,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 10:51:51] 2026-02-26 15:51:41,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 10:51:51] 2026-02-26 15:51:45,288 | INFO     | [monitor] cgroup control has ended
[2026-02-26 10:51:51] 2026-02-26 15:51:46,332 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129439331637056)>', '<ExcThread(monitor, started 129438553462528)>']
[2026-02-26 10:51:51] 2026-02-26 15:51:46,458 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 10:51:51] 2026-02-26 15:51:46,458 | INFO     | [monitor] control thread has ended
[2026-02-26 10:51:51] 2026-02-26 15:51:51,357 | INFO     | all workflow threads have been joined
[2026-02-26 10:51:51] 2026-02-26 15:51:51,357 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 10:51:51] 2026-02-26 15:51:51,357 | INFO     | traces error code: 0
[2026-02-26 10:51:51] 2026-02-26 15:51:51,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 10:51:51] 2026-02-26 15:51:51,441 [wrapper] ==== pilot stdout END ====
[2026-02-26 10:51:51] 2026-02-26 15:51:51,443 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 10:51:51] 2026-02-26 15:51:51,445 [wrapper] pilotpid: 878105
[2026-02-26 10:51:51] 2026-02-26 15:51:51,447 [wrapper] Pilot exit status: 0
[2026-02-26 10:51:51] 2026-02-26 15:51:51,455 [wrapper] pandaids: 7030348235
[2026-02-26 10:51:51] 2026-02-26 15:51:51,489 [wrapper] cleanup supervisor_pilot  981282 878106
[2026-02-26 10:51:51] 2026-02-26 15:51:51,491 [wrapper] Test setup, not cleaning
[2026-02-26 10:51:51] 2026-02-26 15:51:51,493 [wrapper] apfmon messages muted
[2026-02-26 10:51:51] 2026-02-26 15:51:51,495 [wrapper] ==== wrapper stdout END ====
[2026-02-26 10:51:51] 2026-02-26 15:51:51,497 [wrapper] ==== wrapper stderr END ====
[2026-02-26 10:51:51]  *** Error codes and diagnostics ***
[2026-02-26 10:51:51]     "exeErrorCode": 0,
[2026-02-26 10:51:51]     "exeErrorDiag": "",
[2026-02-26 10:51:51]     "pilotErrorCode": 0,
[2026-02-26 10:51:51]     "pilotErrorDiag": "",
[2026-02-26 10:51:51]  *** Listing of results directory ***
[2026-02-26 10:51:51] total 512424
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc    584627 Feb 25 11:51 pilot3.tar.gz
[2026-02-26 10:51:51] -rwx------ 1 boinc boinc     36322 Feb 25 11:53 runpilot2-wrapper.sh
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc      5111 Feb 25 11:53 queuedata.json
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc       100 Feb 26 08:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 10:51:51] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 08:26 run_atlas
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc       105 Feb 26 08:26 job.xml
[2026-02-26 10:51:51] -rw-r--r-- 2 boinc boinc 287699966 Feb 26 08:26 EVNT.48220165._000014.pool.root.1
[2026-02-26 10:51:51] -rw-r--r-- 2 boinc boinc     15845 Feb 26 08:26 start_atlas.sh
[2026-02-26 10:51:51] drwxrwx--x 2 boinc boinc      4096 Feb 26 08:26 shared
[2026-02-26 10:51:51] -rw-r--r-- 2 boinc boinc    597947 Feb 26 08:26 input.tar.gz
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc      6477 Feb 26 08:26 init_data.xml
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc         0 Feb 26 08:26 boinc_setup_complete
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc         0 Feb 26 08:26 boinc_lockfile
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc      2552 Feb 26 08:26 pandaJob.out
[2026-02-26 10:51:51] -rw------- 1 boinc boinc    997714 Feb 26 08:26 agis_schedconf.cvmfs.json
[2026-02-26 10:51:51] -rw------- 1 boinc boinc   1513015 Feb 26 08:26 agis_ddmendpoints.agis.ALL.json
[2026-02-26 10:51:51] -rw------- 1 boinc boinc       423 Feb 26 08:26 workernode_map.json
[2026-02-26 10:51:51] drwx------ 5 boinc boinc      4096 Feb 26 08:26 pilot3
[2026-02-26 10:51:51] -rw------- 1 boinc boinc 229894297 Feb 26 10:50 HITS.48838492._000349.pool.root.1
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc       529 Feb 26 10:51 boinc_task_state.xml
[2026-02-26 10:51:51] -rw------- 1 boinc boinc      1025 Feb 26 10:51 memory_monitor_summary.json
[2026-02-26 10:51:51] -rw------- 1 boinc boinc    337818 Feb 26 10:51 log.48838492._000349.job.log.tgz.1
[2026-02-26 10:51:51] -rw------- 1 boinc boinc        95 Feb 26 10:51 pilot_heartbeat.json
[2026-02-26 10:51:51] -rw------- 1 boinc boinc      6289 Feb 26 10:51 heartbeat.json
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc      8192 Feb 26 10:51 boinc_mmap_file
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc        27 Feb 26 10:51 wrapper_checkpoint.txt
[2026-02-26 10:51:51] -rw------- 1 boinc boinc      4898 Feb 26 10:51 pilotlog.txt
[2026-02-26 10:51:51] -rw------- 1 boinc boinc   1259571 Feb 26 10:51 log.48838492._000349.job.log.1
[2026-02-26 10:51:51] -rw------- 1 boinc boinc       357 Feb 26 10:51 output.list
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc       620 Feb 26 10:51 runtime_log
[2026-02-26 10:51:51] -rw------- 1 boinc boinc   1617920 Feb 26 10:51 result.tar.gz
[2026-02-26 10:51:51] -rw------- 1 boinc boinc       643 Feb 26 10:51 LllNDmXJXF9n9Rq4apOajLDm4fhM0noT9bVooX4SDm4CzKDmVYchhn.diag
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc      8891 Feb 26 10:51 runtime_log.err
[2026-02-26 10:51:51] -rw-r--r-- 1 boinc boinc     20925 Feb 26 10:51 stderr.txt
[2026-02-26 10:51:51] HITS file was successfully produced:
[2026-02-26 10:51:51] -rw------- 1 boinc boinc 229894297 Feb 26 10:50 shared/HITS.pool.root.1
[2026-02-26 10:51:51]  *** Contents of shared directory: ***
[2026-02-26 10:51:51] total 507656
[2026-02-26 10:51:51] -rw-r--r-- 2 boinc boinc 287699966 Feb 26 08:26 ATLAS.root_0
[2026-02-26 10:51:51] -rw-r--r-- 2 boinc boinc     15845 Feb 26 08:26 start_atlas.sh
[2026-02-26 10:51:51] -rw-r--r-- 2 boinc boinc    597947 Feb 26 08:26 input.tar.gz
[2026-02-26 10:51:51] -rw------- 1 boinc boinc 229894297 Feb 26 10:50 HITS.pool.root.1
[2026-02-26 10:51:51] -rw------- 1 boinc boinc   1617920 Feb 26 10:51 result.tar.gz
10:51:52 (873927): run_atlas exited; CPU time 33705.265214
10:51:52 (873927): called boinc_finish(0)

</stderr_txt>
]]>

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