Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:38:45 (1394): wrapper (7.7.26015): starting
10:38:45 (1394): wrapper: running run_atlas (--nthreads 8)
[2026-02-26 10:38:45] Arguments: --nthreads 8
[2026-02-26 10:38:45] Threads: 8
[2026-02-26 10:38:45] Checking for CVMFS
[2026-02-26 10:38:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 10:38:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 10:38:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 10:38:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 10:38:50] 2.11.2.0 25311 104364 133712 156649 1 88 21942455 25165824 4456 130560 0 30166983 99.758 29400476 2685 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-26 10:38:50] CVMFS is ok
[2026-02-26 10:38:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 10:38:50] Checking for apptainer binary...
[2026-02-26 10:38:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 10:38:50] Running /usr/bin/apptainer --version
[2026-02-26 10:38:50] apptainer version 1.3.2-1.el7
[2026-02-26 10:38:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 10:39:02] cg-vwn420.simple-grid.lan
[2026-02-26 10:39:02] apptainer works
[2026-02-26 10:39:02] Set ATHENA_PROC_NUMBER=8
[2026-02-26 10:39:02] Set ATHENA_CORE_NUMBER=8
[2026-02-26 10:39:02] Starting ATLAS job with PandaID=7030346970
[2026-02-26 10:39:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 15:29:06]  *** The last 200 lines of the pilot log: ***
[2026-02-26 15:29:06] 2026-02-26 14:28:20,071 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7030346970/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 15:29:06] 2026-02-26 14:28:20,071 | INFO     | extracted standard info from prmon json
[2026-02-26 15:29:06] 2026-02-26 14:28:20,071 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 15:29:06] 2026-02-26 14:28:20,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 15:29:06] 2026-02-26 14:28:20,072 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 15:29:06] 2026-02-26 14:28:20,072 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 15:29:06] 2026-02-26 14:28:20,078 | INFO     | fitting pss+swap vs Time
[2026-02-26 15:29:06] 2026-02-26 14:28:20,078 | INFO     | sum of square deviations: 6448679050.0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,081 | INFO     | sum of deviations: 108973709250.0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,081 | INFO     | mean x: 1772107696.0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,081 | INFO     | mean y: 2455825.3527272725
[2026-02-26 15:29:06] 2026-02-26 14:28:20,081 | INFO     | intersect: -29943700174.392895
[2026-02-26 15:29:06] 2026-02-26 14:28:20,082 | INFO     | chi2: 6.403239013613798
[2026-02-26 15:29:06] 2026-02-26 14:28:20,082 | INFO     | sum of square deviations: 6103286527.5
[2026-02-26 15:29:06] 2026-02-26 14:28:20,085 | INFO     | sum of deviations: 125130501181.5
[2026-02-26 15:29:06] 2026-02-26 14:28:20,085 | INFO     | mean x: 1772107543.5
[2026-02-26 15:29:06] 2026-02-26 14:28:20,085 | INFO     | mean y: 2462839.514814815
[2026-02-26 15:29:06] 2026-02-26 14:28:20,085 | INFO     | intersect: -36329553372.82281
[2026-02-26 15:29:06] 2026-02-26 14:28:20,086 | INFO     | chi2: 5.672979912364754
[2026-02-26 15:29:06] 2026-02-26 14:28:20,086 | INFO     | current chi2=5.672979912364754 (change=11.40452667308615 %)
[2026-02-26 15:29:06] 2026-02-26 14:28:20,086 | INFO     | right removable region: 269
[2026-02-26 15:29:06] 2026-02-26 14:28:20,087 | INFO     | sum of square deviations: 6103286527.5
[2026-02-26 15:29:06] 2026-02-26 14:28:20,089 | INFO     | sum of deviations: 16564340922.499996
[2026-02-26 15:29:06] 2026-02-26 14:28:20,089 | INFO     | mean x: 1772107848.5
[2026-02-26 15:29:06] 2026-02-26 14:28:20,089 | INFO     | mean y: 2496592.5074074073
[2026-02-26 15:29:06] 2026-02-26 14:28:20,090 | INFO     | intersect: -4807010289.027736
[2026-02-26 15:29:06] 2026-02-26 14:28:20,090 | INFO     | chi2: 2.0127925364470807
[2026-02-26 15:29:06] 2026-02-26 14:28:20,090 | INFO     | current chi2=2.0127925364470807 (change=68.56602522305161 %)
[2026-02-26 15:29:06] 2026-02-26 14:28:20,091 | INFO     | sum of square deviations: 5770452380.0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,093 | INFO     | sum of deviations: -24634423427.0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,093 | INFO     | mean x: 1772108001.0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,094 | INFO     | mean y: 2515351.147169811
[2026-02-26 15:29:06] 2026-02-26 14:28:20,094 | INFO     | intersect: 7567755644.319564
[2026-02-26 15:29:06] 2026-02-26 14:28:20,094 | INFO     | chi2: 0.8829135270076127
[2026-02-26 15:29:06] 2026-02-26 14:28:20,094 | INFO     | current chi2=0.8829135270076127 (change=56.13489661651347 %)
[2026-02-26 15:29:06] 2026-02-26 14:28:20,095 | INFO     | sum of square deviations: 5449944045.0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,097 | INFO     | sum of deviations: -21680832646.000004
[2026-02-26 15:29:06] 2026-02-26 14:28:20,097 | INFO     | mean x: 1772108153.5
[2026-02-26 15:29:06] 2026-02-26 14:28:20,097 | INFO     | mean y: 2513919.076923077
[2026-02-26 15:29:06] 2026-02-26 14:28:20,097 | INFO     | intersect: 7052270758.671335
[2026-02-26 15:29:06] 2026-02-26 14:28:20,098 | INFO     | chi2: 0.8646854086103619
[2026-02-26 15:29:06] 2026-02-26 14:28:20,098 | INFO     | current chi2=0.8646854086103619 (change=2.0645417517873907 %)
[2026-02-26 15:29:06] 2026-02-26 14:28:20,098 | INFO     | left removable region: 30
[2026-02-26 15:29:06] 2026-02-26 14:28:20,099 | INFO     | sum of square deviations: 4233158440.0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,101 | INFO     | sum of deviations: 7996085386.999997
[2026-02-26 15:29:06] 2026-02-26 14:28:20,101 | INFO     | mean x: 1772108428.0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,101 | INFO     | mean y: 2516202.59832636
[2026-02-26 15:29:06] 2026-02-26 14:28:20,101 | INFO     | intersect: -3344849719.597191
[2026-02-26 15:29:06] 2026-02-26 14:28:20,102 | INFO     | chi2: 0.0010446637535660443
[2026-02-26 15:29:06] 2026-02-26 14:28:20,102 | INFO     | current memory leak: 1.89 B/s (using 239 data points, chi2=0.00)
[2026-02-26 15:29:06] 2026-02-26 14:28:20,102 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-02-26 15:29:06] 2026-02-26 14:28:20,103 | INFO     | ..............................
[2026-02-26 15:29:06] 2026-02-26 14:28:20,103 | INFO     | . Timing measurements:
[2026-02-26 15:29:06] 2026-02-26 14:28:20,103 | INFO     | . get job = 0 s
[2026-02-26 15:29:06] 2026-02-26 14:28:20,103 | INFO     | . initial setup = 99 s
[2026-02-26 15:29:06] 2026-02-26 14:28:20,103 | INFO     | . payload setup = 129 s
[2026-02-26 15:29:06] 2026-02-26 14:28:20,103 | INFO     | . stage-in = 0 s
[2026-02-26 15:29:06] 2026-02-26 14:28:20,103 | INFO     | . payload execution = 16878 s
[2026-02-26 15:29:06] 2026-02-26 14:28:20,103 | INFO     | . stage-out = 3 s
[2026-02-26 15:29:06] 2026-02-26 14:28:20,103 | INFO     | . log creation = 1 s
[2026-02-26 15:29:06] 2026-02-26 14:28:20,104 | INFO     | ..............................
[2026-02-26 15:29:06] 2026-02-26 14:28:20,237 | INFO     | 
[2026-02-26 15:29:06] 2026-02-26 14:28:20,237 | INFO     | job summary report
[2026-02-26 15:29:06] 2026-02-26 14:28:20,237 | INFO     | --------------------------------------------------
[2026-02-26 15:29:06] 2026-02-26 14:28:20,237 | INFO     | PanDA job id: 7030346970
[2026-02-26 15:29:06] 2026-02-26 14:28:20,237 | INFO     | task id: 48838506
[2026-02-26 15:29:06] 2026-02-26 14:28:20,237 | INFO     | errors: (none)
[2026-02-26 15:29:06] 2026-02-26 14:28:20,238 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 15:29:06] 2026-02-26 14:28:20,238 | INFO     | pilot state: finished 
[2026-02-26 15:29:06] 2026-02-26 14:28:20,238 | INFO     | transexitcode: 0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,238 | INFO     | exeerrorcode: 0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,238 | INFO     | exeerrordiag: 
[2026-02-26 15:29:06] 2026-02-26 14:28:20,238 | INFO     | exitcode: 0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,238 | INFO     | exitmsg: OK
[2026-02-26 15:29:06] 2026-02-26 14:28:20,238 | INFO     | cpuconsumptiontime: 62514 s
[2026-02-26 15:29:06] 2026-02-26 14:28:20,238 | INFO     | nevents: 400
[2026-02-26 15:29:06] 2026-02-26 14:28:20,239 | INFO     | neventsw: 0
[2026-02-26 15:29:06] 2026-02-26 14:28:20,239 | INFO     | pid: 10077
[2026-02-26 15:29:06] 2026-02-26 14:28:20,239 | INFO     | pgrp: 10077
[2026-02-26 15:29:06] 2026-02-26 14:28:20,239 | INFO     | corecount: 8
[2026-02-26 15:29:06] 2026-02-26 14:28:20,239 | INFO     | event service: False
[2026-02-26 15:29:06] 2026-02-26 14:28:20,239 | INFO     | sizes: {0: 2281177, 1: 2282235, 2: 2282323, 13: 2282323, 17012: 2314187, 17016: 2323185, 17018: 2323563}
[2026-02-26 15:29:06] 2026-02-26 14:28:20,239 | INFO     | --------------------------------------------------
[2026-02-26 15:29:06] 2026-02-26 14:28:20,239 | INFO     | 
[2026-02-26 15:29:06] 2026-02-26 14:28:20,239 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-02-26 15:29:06] 2026-02-26 14:28:20,540 | INFO     | time since job start (17032s) is within the limit (349056.0s)
[2026-02-26 15:29:06] 2026-02-26 14:28:20,580 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,580 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,580 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,581 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,581 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,581 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,581 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,581 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,581 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,581 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,581 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,582 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,582 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,582 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,582 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,582 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,582 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,582 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 15:29:06] 2026-02-26 14:28:20,582 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,583 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 15:29:06] 2026-02-26 14:28:20,583 | INFO     | job 7030346970 has completed (purged errors)
[2026-02-26 15:29:06] 2026-02-26 14:28:20,583 | INFO     | overall cleanup function is called
[2026-02-26 15:29:06] 2026-02-26 14:28:21,592 | INFO     | --- collectZombieJob: --- 10, [10077]
[2026-02-26 15:29:06] 2026-02-26 14:28:21,592 | INFO     | zombie collector waiting for pid 10077
[2026-02-26 15:29:06] 2026-02-26 14:28:21,592 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 15:29:06] 2026-02-26 14:28:21,592 | INFO     | collected zombie processes
[2026-02-26 15:29:06] 2026-02-26 14:28:21,592 | INFO     | will attempt to kill all subprocesses of pid=10077
[2026-02-26 15:29:06] 2026-02-26 14:28:21,721 | INFO     | process IDs to be killed: [10077] (in reverse order)
[2026-02-26 15:29:06] 2026-02-26 14:28:22,217 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 15:29:06] 2026-02-26 14:28:22,218 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 15:29:06] 2026-02-26 14:28:22,221 | INFO     | did not find any defunct processes belonging to 10077
[2026-02-26 15:29:06] 2026-02-26 14:28:22,224 | INFO     | did not find any defunct processes belonging to 10077
[2026-02-26 15:29:06] 2026-02-26 14:28:22,224 | INFO     | ready for new job
[2026-02-26 15:29:06] 2026-02-26 14:28:22,224 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 15:29:06] 2026-02-26 14:28:22,226 | INFO     | **************************************
[2026-02-26 15:29:06] 2026-02-26 14:28:22,227 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 15:29:06] 2026-02-26 14:28:22,227 | INFO     | **************************************
[2026-02-26 15:29:06] 2026-02-26 14:28:22,227 | INFO     | 
[2026-02-26 15:29:06] 2026-02-26 14:28:22,227 | INFO     | pilot is running in a VM
[2026-02-26 15:29:06] 2026-02-26 14:28:22,227 | INFO     | architecture information:
[2026-02-26 15:29:06] 2026-02-26 14:28:22,229 | INFO     | executing command: cat /etc/os-release
[2026-02-26 15:29:06] 2026-02-26 14:28:22,485 | INFO     | cat /etc/os-release:
[2026-02-26 15:29:06] NAME="CentOS Linux"
[2026-02-26 15:29:06] VERSION="7 (Core)"
[2026-02-26 15:29:06] ID="centos"
[2026-02-26 15:29:06] ID_LIKE="rhel fedora"
[2026-02-26 15:29:06] VERSION_ID="7"
[2026-02-26 15:29:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 15:29:06] ANSI_COLOR="0;31"
[2026-02-26 15:29:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 15:29:06] HOME_URL="https://www.centos.org/"
[2026-02-26 15:29:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 15:29:06] 
[2026-02-26 15:29:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 15:29:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 15:29:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 15:29:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 15:29:06] 
[2026-02-26 15:29:06] 2026-02-26 14:28:22,485 | INFO     | **************************************
[2026-02-26 15:29:06] 2026-02-26 14:28:22,989 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-02-26 15:29:06] 2026-02-26 14:28:23,211 | INFO     | sufficient remaining disk space (496252223488 B)
[2026-02-26 15:29:06] 2026-02-26 14:28:23,212 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 15:29:06] 2026-02-26 14:28:23,212 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 15:29:06] 2026-02-26 14:28:23,212 | INFO     | update_server=False
[2026-02-26 15:29:06] 2026-02-26 14:28:23,212 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 15:29:06] 2026-02-26 14:28:23,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 15:29:06] 2026-02-26 14:28:23,575 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-26 15:29:06] 2026-02-26 14:28:23,575 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-26 15:29:06] 2026-02-26 14:28:23,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 15:29:06] 2026-02-26 14:28:23,575 | INFO     | will abort loop
[2026-02-26 15:29:06] 2026-02-26 14:28:23,631 | INFO     | all data control threads have been joined
[2026-02-26 15:29:06] 2026-02-26 14:28:24,063 | INFO     | all job control threads have been joined
[2026-02-26 15:29:06] 2026-02-26 14:28:24,079 | INFO     | all payload control threads have been joined
[2026-02-26 15:29:06] 2026-02-26 14:28:24,218 | INFO     | [job] retrieve thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:24,267 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:24,349 | INFO     | [payload] failed_post thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:24,581 | INFO     | [job] job monitor thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:24,637 | INFO     | [data] control thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:24,821 | INFO     | [data] copytool_in thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:24,832 | INFO     | [payload] validate_post thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:25,015 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:25,069 | INFO     | [job] control thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:25,085 | INFO     | [payload] control thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:25,256 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 15:29:06] 2026-02-26 14:28:25,261 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:25,462 | INFO     | [data] copytool_out thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:25,670 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:25,700 | INFO     | [job] validate thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:26,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 15:29:06] 2026-02-26 14:28:26,262 | INFO     | [job] queue monitor thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:30,087 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 15:29:06] 2026-02-26 14:28:53,737 | INFO     | PID=5551 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-26 15:29:06] 2026-02-26 14:28:53,737 | INFO     | .. there are 9 such processes running
[2026-02-26 15:29:06] 2026-02-26 14:28:53,738 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 15:29:06] 2026-02-26 14:28:53,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 15:29:06] 2026-02-26 14:28:53,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 15:29:06] 2026-02-26 14:28:56,890 | INFO     | [monitor] cgroup control has ended
[2026-02-26 15:29:06] 2026-02-26 14:28:57,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587733804864)>', '<ExcThread(monitor, started 140587156104960)>']
[2026-02-26 15:29:06] 2026-02-26 14:28:57,769 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 15:29:06] 2026-02-26 14:28:57,769 | INFO     | [monitor] control thread has ended
[2026-02-26 15:29:06] 2026-02-26 14:29:02,348 | INFO     | all workflow threads have been joined
[2026-02-26 15:29:06] 2026-02-26 14:29:02,348 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 15:29:06] 2026-02-26 14:29:02,348 | INFO     | traces error code: 0
[2026-02-26 15:29:06] 2026-02-26 14:29:02,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 15:29:06] 2026-02-26 14:29:02,621 [wrapper] ==== pilot stdout END ====
[2026-02-26 15:29:06] 2026-02-26 14:29:02,698 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 15:29:06] 2026-02-26 14:29:02,804 [wrapper] pilotpid: 5551
[2026-02-26 15:29:06] 2026-02-26 14:29:02,897 [wrapper] Pilot exit status: 0
[2026-02-26 15:29:06] 2026-02-26 14:29:03,321 [wrapper] pandaids: 7030346970
[2026-02-26 15:29:06] 2026-02-26 14:29:03,958 [wrapper] cleanup supervisor_pilot 21090 5552
[2026-02-26 15:29:06] 2026-02-26 14:29:03,976 [wrapper] Test setup, not cleaning
[2026-02-26 15:29:06] 2026-02-26 14:29:03,992 [wrapper] apfmon messages muted
[2026-02-26 15:29:06] 2026-02-26 14:29:04,064 [wrapper] ==== wrapper stdout END ====
[2026-02-26 15:29:06] 2026-02-26 14:29:04,133 [wrapper] ==== wrapper stderr END ====
[2026-02-26 15:29:06]  *** Error codes and diagnostics ***
[2026-02-26 15:29:06]     "exeErrorCode": 0,
[2026-02-26 15:29:06]     "exeErrorDiag": "",
[2026-02-26 15:29:06]     "pilotErrorCode": 0,
[2026-02-26 15:29:06]     "pilotErrorDiag": "",
[2026-02-26 15:29:06]  *** Listing of results directory ***
[2026-02-26 15:29:06] total 465004
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc    584627 Feb 25 17:51 pilot3.tar.gz
[2026-02-26 15:29:06] -rwx------. 1 boinc boinc     36322 Feb 25 17:53 runpilot2-wrapper.sh
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc      5111 Feb 25 17:53 queuedata.json
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc       100 Feb 26 10:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 15:29:06] -rwxr-xr-x. 1 boinc boinc      7986 Feb 26 10:38 run_atlas
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc       105 Feb 26 10:38 job.xml
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc      6391 Feb 26 10:38 init_data.xml
[2026-02-26 15:29:06] -rw-r--r--. 2 boinc boinc 267998369 Feb 26 10:38 EVNT.48220181._000010.pool.root.1
[2026-02-26 15:29:06] -rw-r--r--. 2 boinc boinc     15845 Feb 26 10:38 start_atlas.sh
[2026-02-26 15:29:06] drwxrwx--x. 2 boinc boinc        68 Feb 26 10:38 shared
[2026-02-26 15:29:06] -rw-r--r--. 2 boinc boinc    597935 Feb 26 10:38 input.tar.gz
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc         0 Feb 26 10:38 boinc_lockfile
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc      2560 Feb 26 10:39 pandaJob.out
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc       415 Feb 26 10:44 workernode_map.json
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc    997714 Feb 26 10:44 agis_schedconf.cvmfs.json
[2026-02-26 15:29:06] drwx------. 5 boinc boinc      4096 Feb 26 10:44 pilot3
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc 198547023 Feb 26 15:26 HITS.48838506._000227.pool.root.1
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc       531 Feb 26 15:27 boinc_task_state.xml
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc      1009 Feb 26 15:28 memory_monitor_summary.json
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc   1513015 Feb 26 15:28 agis_ddmendpoints.agis.ALL.json
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc    484091 Feb 26 15:28 log.48838506._000227.job.log.tgz.1
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc      6308 Feb 26 15:28 heartbeat.json
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc        95 Feb 26 15:28 pilot_heartbeat.json
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc      5065 Feb 26 15:29 pilotlog.txt
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc   2368203 Feb 26 15:29 log.48838506._000227.job.log.1
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc      8192 Feb 26 15:29 boinc_mmap_file
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc       357 Feb 26 15:29 output.list
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc       620 Feb 26 15:29 runtime_log
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc   2867200 Feb 26 15:29 result.tar.gz
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc      8816 Feb 26 15:29 runtime_log.err
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc       655 Feb 26 15:29 OLMLDmmJXF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmWEzKDmnaEf1n.diag
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc        28 Feb 26 15:29 wrapper_checkpoint.txt
[2026-02-26 15:29:06] -rw-r--r--. 1 boinc boinc     20717 Feb 26 15:29 stderr.txt
[2026-02-26 15:29:06] HITS file was successfully produced:
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc 198547023 Feb 26 15:26 shared/HITS.pool.root.1
[2026-02-26 15:29:06]  *** Contents of shared directory: ***
[2026-02-26 15:29:06] total 459016
[2026-02-26 15:29:06] -rw-r--r--. 2 boinc boinc 267998369 Feb 26 10:38 ATLAS.root_0
[2026-02-26 15:29:06] -rw-r--r--. 2 boinc boinc     15845 Feb 26 10:38 start_atlas.sh
[2026-02-26 15:29:06] -rw-r--r--. 2 boinc boinc    597935 Feb 26 10:38 input.tar.gz
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc 198547023 Feb 26 15:26 HITS.pool.root.1
[2026-02-26 15:29:06] -rw-------. 1 boinc boinc   2867200 Feb 26 15:29 result.tar.gz
15:29:07 (1394): run_atlas exited; CPU time 62774.887450
15:29:07 (1394): called boinc_finish(0)

</stderr_txt>
]]>

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