Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:17:54 (43241): wrapper (7.7.26015): starting
09:17:54 (43241): wrapper: running run_atlas (--nthreads 4)
[2026-02-26 09:17:54] Arguments: --nthreads 4
[2026-02-26 09:17:54] Threads: 4
[2026-02-26 09:17:54] Checking for CVMFS
[2026-02-26 09:17:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 09:17:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 09:17:54] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 09:17:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 09:17:54] 2.9.2.0 3122 247 61588 156648 1 49 28157141 36864000 0 130560 0 114568 99.980 12274 4361 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-26 09:17:54] CVMFS is ok
[2026-02-26 09:17:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 09:17:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 09:17:54] Further information can be found at the LHC@home message board.
[2026-02-26 09:17:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 09:17:54] Checking for apptainer binary...
[2026-02-26 09:17:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 09:17:54] Running /usr/bin/apptainer --version
[2026-02-26 09:17:54] apptainer version 1.4.1-1.1
[2026-02-26 09:17:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 09:17:55] atlasA139
[2026-02-26 09:17:55] apptainer works
[2026-02-26 09:17:55] Set ATHENA_PROC_NUMBER=4
[2026-02-26 09:17:55] Set ATHENA_CORE_NUMBER=4
[2026-02-26 09:17:55] Starting ATLAS job with PandaID=7030346496
[2026-02-26 09:17:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 10:44:21]  *** The last 200 lines of the pilot log: ***
[2026-02-26 10:44:21] 2026-02-26 09:43:48,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 10:44:21] 2026-02-26 09:43:48,935 | INFO     | all data control threads have been joined
[2026-02-26 10:44:21] 2026-02-26 09:43:49,136 | INFO     | all payload control threads have been joined
[2026-02-26 10:44:21] 2026-02-26 09:43:49,495 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 10:44:21] 2026-02-26 09:43:49,610 | INFO     | all job control threads have been joined
[2026-02-26 10:44:21] 2026-02-26 09:43:49,742 | INFO     | [job] retrieve thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:49,742 | INFO     | [job] job monitor thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:49,786 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:49,828 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:49,862 | INFO     | [payload] failed_post thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:49,912 | INFO     | [data] copytool_in thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:49,941 | INFO     | [data] control thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:50,142 | INFO     | [payload] control thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:50,450 | INFO     | [payload] validate_post thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:50,616 | INFO     | [job] control thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:50,908 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 10:44:21] 2026-02-26 09:43:51,082 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:51,139 | INFO     | [job] validate thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:51,501 | INFO     | [data] copytool_out thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:51,625 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 10:44:21] 2026-02-26 09:43:52,630 | INFO     | [job] queue monitor thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:54,915 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:43:59,247 | INFO     | job.realtimelogging is not enabled
[2026-02-26 10:44:21] 2026-02-26 09:44:00,253 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 10:44:21] 2026-02-26 09:44:14,879 | INFO     | [monitor] cgroup control has ended
[2026-02-26 10:44:21] 2026-02-26 09:44:16,108 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140472207726400)>', '<ExcThread(monitor, started 140471032592128)>']
[2026-02-26 10:44:21] 2026-02-26 09:44:16,888 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 10:44:21] 2026-02-26 09:44:16,888 | INFO     | [monitor] control thread has ended
[2026-02-26 10:44:21] 2026-02-26 09:44:21,134 | INFO     | all workflow threads have been joined
[2026-02-26 10:44:21] 2026-02-26 09:44:21,134 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 10:44:21] 2026-02-26 09:44:21,135 | INFO     | traces error code: 0
[2026-02-26 10:44:21] 2026-02-26 09:44:21,135 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 10:44:21] 2026-02-26 09:44:21,203 [wrapper] ==== pilot stdout END ====
[2026-02-26 10:44:21] 2026-02-26 09:44:21,206 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 10:44:21] 2026-02-26 09:44:21,210 [wrapper] pilotpid: 47350
[2026-02-26 10:44:21] 2026-02-26 09:44:21,214 [wrapper] Pilot exit status: 0
[2026-02-26 10:44:21] 2026-02-26 09:44:21,226 [wrapper] pandaids: 7030346496
[2026-02-26 10:44:21] 2026-02-26 09:44:21,248 [wrapper] cleanup supervisor_pilot   57007 47351
[2026-02-26 10:44:21] 2026-02-26 09:44:21,251 [wrapper] Test setup, not cleaning
[2026-02-26 10:44:21] 2026-02-26 09:44:21,255 [wrapper] apfmon messages muted
[2026-02-26 10:44:21] 2026-02-26 09:44:21,258 [wrapper] ==== wrapper stdout END ====
[2026-02-26 10:44:21] 2026-02-26 09:44:21,262 [wrapper] ==== wrapper stderr END ====
[2026-02-26 10:44:21]  *** Error codes and diagnostics ***
[2026-02-26 10:44:21]     "exeErrorCode": 0,
[2026-02-26 10:44:21]     "exeErrorDiag": "",
[2026-02-26 10:44:21]     "pilotErrorCode": 0,
[2026-02-26 10:44:21]     "pilotErrorDiag": "",
[2026-02-26 10:44:21]  *** Listing of results directory ***
[2026-02-26 10:44:21] total 506272
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc    584627 Feb 25 17:51 pilot3.tar.gz
[2026-02-26 10:44:21] -rwx------ 1 boinc boinc     36322 Feb 25 17:52 runpilot2-wrapper.sh
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc      5111 Feb 25 17:53 queuedata.json
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc       100 Feb 26 09:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 10:44:21] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 09:17 run_atlas
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc       105 Feb 26 09:17 job.xml
[2026-02-26 10:44:21] -rw-r--r-- 2 boinc boinc 285916701 Feb 26 09:17 EVNT.48220165._000003.pool.root.1
[2026-02-26 10:44:21] -rw-r--r-- 2 boinc boinc    597951 Feb 26 09:17 input.tar.gz
[2026-02-26 10:44:21] -rw-r--r-- 2 boinc boinc     15845 Feb 26 09:17 start_atlas.sh
[2026-02-26 10:44:21] drwxrwx--x 2 boinc boinc      4096 Feb 26 09:17 shared
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc         0 Feb 26 09:17 boinc_setup_complete
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc      6372 Feb 26 09:17 init_data.xml
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc         0 Feb 26 09:17 boinc_lockfile
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc      2548 Feb 26 09:17 pandaJob.out
[2026-02-26 10:44:21] -rw------- 1 boinc boinc    997714 Feb 26 09:18 agis_schedconf.cvmfs.json
[2026-02-26 10:44:21] -rw------- 1 boinc boinc   1513015 Feb 26 09:18 agis_ddmendpoints.agis.ALL.json
[2026-02-26 10:44:21] -rw------- 1 boinc boinc       422 Feb 26 09:18 workernode_map.json
[2026-02-26 10:44:21] drwx------ 5 boinc boinc      4096 Feb 26 09:18 pilot3
[2026-02-26 10:44:21] -rw------- 1 boinc boinc 226580971 Feb 26 10:43 HITS.48838492._000053.pool.root.1
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc       529 Feb 26 10:43 boinc_task_state.xml
[2026-02-26 10:44:21] -rw------- 1 boinc boinc        95 Feb 26 10:43 pilot_heartbeat.json
[2026-02-26 10:44:21] -rw------- 1 boinc boinc      1035 Feb 26 10:43 memory_monitor_summary.json
[2026-02-26 10:44:21] -rw------- 1 boinc boinc    259669 Feb 26 10:43 log.48838492._000053.job.log.tgz.1
[2026-02-26 10:44:21] -rw------- 1 boinc boinc      6309 Feb 26 10:43 heartbeat.json
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc        27 Feb 26 10:44 wrapper_checkpoint.txt
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc      8192 Feb 26 10:44 boinc_mmap_file
[2026-02-26 10:44:21] -rw------- 1 boinc boinc      4624 Feb 26 10:44 pilotlog.txt
[2026-02-26 10:44:21] -rw------- 1 boinc boinc    748849 Feb 26 10:44 log.48838492._000053.job.log.1
[2026-02-26 10:44:21] -rw------- 1 boinc boinc       357 Feb 26 10:44 output.list
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc       620 Feb 26 10:44 runtime_log
[2026-02-26 10:44:21] -rw------- 1 boinc boinc   1024000 Feb 26 10:44 result.tar.gz
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc      8911 Feb 26 10:44 runtime_log.err
[2026-02-26 10:44:21] -rw------- 1 boinc boinc       660 Feb 26 10:44 q3gNDmJJXF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmZBzKDmdy5KIm.diag
[2026-02-26 10:44:21] -rw-r--r-- 1 boinc boinc      6637 Feb 26 10:44 stderr.txt
[2026-02-26 10:44:21] HITS file was successfully produced:
[2026-02-26 10:44:21] -rw------- 1 boinc boinc 226580971 Feb 26 10:43 shared/HITS.pool.root.1
[2026-02-26 10:44:21]  *** Contents of shared directory: ***
[2026-02-26 10:44:21] total 502096
[2026-02-26 10:44:21] -rw-r--r-- 2 boinc boinc 285916701 Feb 26 09:17 ATLAS.root_0
[2026-02-26 10:44:21] -rw-r--r-- 2 boinc boinc    597951 Feb 26 09:17 input.tar.gz
[2026-02-26 10:44:21] -rw-r--r-- 2 boinc boinc     15845 Feb 26 09:17 start_atlas.sh
[2026-02-26 10:44:21] -rw------- 1 boinc boinc 226580971 Feb 26 10:43 HITS.pool.root.1
[2026-02-26 10:44:21] -rw------- 1 boinc boinc   1024000 Feb 26 10:44 result.tar.gz
10:44:22 (43241): run_atlas exited; CPU time 19412.442873
10:44:22 (43241): called boinc_finish(0)

</stderr_txt>
]]>

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