Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:10:48 (947653): wrapper (7.7.26015): starting
04:10:48 (947653): wrapper: running run_atlas (--nthreads 2)
[2026-02-26 04:10:48] Arguments: --nthreads 2
[2026-02-26 04:10:48] Threads: 2
[2026-02-26 04:10:48] Checking for CVMFS
[2026-02-26 04:10:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 04:10:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 04:10:49] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 04:10:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 04:10:49] 2.9.2.0 617737 612 53168 156638 0 50 25075016 36864000 0 130560 0 164134 99.967 28491 20482 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-26 04:10:49] CVMFS is ok
[2026-02-26 04:10:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 04:10:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 04:10:49] Further information can be found at the LHC@home message board.
[2026-02-26 04:10:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 04:10:49] Checking for apptainer binary...
[2026-02-26 04:10:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 04:10:49] Running /usr/bin/apptainer --version
[2026-02-26 04:10:49] apptainer version 1.4.1-1.1
[2026-02-26 04:10:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 04:10:49] thA369
[2026-02-26 04:10:49] apptainer works
[2026-02-26 04:10:49] Set ATHENA_PROC_NUMBER=2
[2026-02-26 04:10:49] Set ATHENA_CORE_NUMBER=2
[2026-02-26 04:10:49] Starting ATLAS job with PandaID=7030346889
[2026-02-26 04:10:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 06:50:25]  *** The last 200 lines of the pilot log: ***
[2026-02-26 06:50:25] 2026-02-26 05:49:32,759 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 06:50:25] 2026-02-26 05:49:32,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 06:50:25] 2026-02-26 05:49:32,761 | INFO     | did not find any defunct processes belonging to 956428
[2026-02-26 06:50:25] 2026-02-26 05:49:32,762 | INFO     | did not find any defunct processes belonging to 956428
[2026-02-26 06:50:25] 2026-02-26 05:49:32,762 | INFO     | ready for new job
[2026-02-26 06:50:25] 2026-02-26 05:49:32,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 06:50:25] 2026-02-26 05:49:32,763 | INFO     | **************************************
[2026-02-26 06:50:25] 2026-02-26 05:49:32,763 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 06:50:25] 2026-02-26 05:49:32,763 | INFO     | **************************************
[2026-02-26 06:50:25] 2026-02-26 05:49:32,763 | INFO     | 
[2026-02-26 06:50:25] 2026-02-26 05:49:32,763 | INFO     | architecture information:
[2026-02-26 06:50:25] 2026-02-26 05:49:32,763 | INFO     | executing command: cat /etc/os-release
[2026-02-26 06:50:25] 2026-02-26 05:49:32,772 | INFO     | cat /etc/os-release:
[2026-02-26 06:50:25] NAME="CentOS Linux"
[2026-02-26 06:50:25] VERSION="7 (Core)"
[2026-02-26 06:50:25] ID="centos"
[2026-02-26 06:50:25] ID_LIKE="rhel fedora"
[2026-02-26 06:50:25] VERSION_ID="7"
[2026-02-26 06:50:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 06:50:25] ANSI_COLOR="0;31"
[2026-02-26 06:50:25] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 06:50:25] HOME_URL="https://www.centos.org/"
[2026-02-26 06:50:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 06:50:25] 
[2026-02-26 06:50:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 06:50:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 06:50:25] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 06:50:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 06:50:25] 
[2026-02-26 06:50:25] 2026-02-26 05:49:32,772 | INFO     | **************************************
[2026-02-26 06:50:25] 2026-02-26 05:49:33,275 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-26 06:50:25] 2026-02-26 05:49:33,284 | INFO     | sufficient remaining disk space (335088189440 B)
[2026-02-26 06:50:25] 2026-02-26 05:49:33,284 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 06:50:25] 2026-02-26 05:49:33,284 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 06:50:25] 2026-02-26 05:49:33,284 | INFO     | update_server=False
[2026-02-26 06:50:25] 2026-02-26 05:49:33,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 06:50:25] 2026-02-26 05:49:33,284 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 06:50:25] 2026-02-26 05:49:33,284 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 06:50:25] 2026-02-26 05:49:33,285 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 06:50:25] 2026-02-26 05:49:33,483 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 06:50:25] 2026-02-26 05:49:33,483 | INFO     | aborting loop
[2026-02-26 06:50:25] 2026-02-26 05:49:34,193 | INFO     | all data control threads have been joined
[2026-02-26 06:50:25] 2026-02-26 05:49:34,289 | INFO     | [job] retrieve thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:34,290 | INFO     | [job] queue monitor thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:34,299 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:34,392 | INFO     | [payload] failed_post thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:34,402 | INFO     | [data] copytool_in thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:34,488 | INFO     | [job] job monitor thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:34,599 | INFO     | all payload control threads have been joined
[2026-02-26 06:50:25] 2026-02-26 05:49:34,891 | INFO     | all job control threads have been joined
[2026-02-26 06:50:25] 2026-02-26 05:49:34,905 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:35,178 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:35,198 | INFO     | [data] control thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:35,235 | INFO     | [payload] validate_post thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:35,290 | INFO     | [data] copytool_out thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:35,604 | INFO     | [payload] control thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:35,693 | INFO     | [job] validate thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:35,760 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:35,897 | INFO     | [job] control thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:49:37,290 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 06:50:25] 2026-02-26 05:50:03,916 | INFO     | PID=951764 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-26 06:50:25] 2026-02-26 05:50:04,018 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 06:50:25] 2026-02-26 05:50:04,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 06:50:25] 2026-02-26 05:50:04,018 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 06:50:25] 2026-02-26 05:50:20,404 | INFO     | [monitor] cgroup control has ended
[2026-02-26 06:50:25] 2026-02-26 05:50:20,603 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548063737664)>', '<ExcThread(monitor, started 140547285047040)>']
[2026-02-26 06:50:25] 2026-02-26 05:50:21,100 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 06:50:25] 2026-02-26 05:50:21,100 | INFO     | [monitor] control thread has ended
[2026-02-26 06:50:25] 2026-02-26 05:50:25,628 | INFO     | all workflow threads have been joined
[2026-02-26 06:50:25] 2026-02-26 05:50:25,628 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 06:50:25] 2026-02-26 05:50:25,628 | INFO     | traces error code: 0
[2026-02-26 06:50:25] 2026-02-26 05:50:25,629 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 06:50:25] 2026-02-26 05:50:25,705 [wrapper] ==== pilot stdout END ====
[2026-02-26 06:50:25] 2026-02-26 05:50:25,707 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 06:50:25] 2026-02-26 05:50:25,710 [wrapper] pilotpid: 951764
[2026-02-26 06:50:25] 2026-02-26 05:50:25,711 [wrapper] Pilot exit status: 0
[2026-02-26 06:50:25] 2026-02-26 05:50:25,718 [wrapper] pandaids: 7030346889
[2026-02-26 06:50:25] 2026-02-26 05:50:25,732 [wrapper] cleanup supervisor_pilot 1068614 951765
[2026-02-26 06:50:25] 2026-02-26 05:50:25,734 [wrapper] Test setup, not cleaning
[2026-02-26 06:50:25] 2026-02-26 05:50:25,736 [wrapper] apfmon messages muted
[2026-02-26 06:50:25] 2026-02-26 05:50:25,738 [wrapper] ==== wrapper stdout END ====
[2026-02-26 06:50:25] 2026-02-26 05:50:25,740 [wrapper] ==== wrapper stderr END ====
[2026-02-26 06:50:25]  *** Error codes and diagnostics ***
[2026-02-26 06:50:25]     "exeErrorCode": 0,
[2026-02-26 06:50:25]     "exeErrorDiag": "",
[2026-02-26 06:50:25]     "pilotErrorCode": 0,
[2026-02-26 06:50:25]     "pilotErrorDiag": "",
[2026-02-26 06:50:25]  *** Listing of results directory ***
[2026-02-26 06:50:25] total 470604
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc    584627 Feb 25 17:51 pilot3.tar.gz
[2026-02-26 06:50:25] -rwx------ 1 boinc boinc     36322 Feb 25 17:53 runpilot2-wrapper.sh
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc      5111 Feb 25 17:53 queuedata.json
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc       100 Feb 26 04:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 06:50:25] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 04:10 run_atlas
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc       105 Feb 26 04:10 job.xml
[2026-02-26 06:50:25] -rw-r--r-- 2 boinc boinc 269777250 Feb 26 04:10 EVNT.48220181._000006.pool.root.1
[2026-02-26 06:50:25] -rw-r--r-- 2 boinc boinc    597949 Feb 26 04:10 input.tar.gz
[2026-02-26 06:50:25] -rw-r--r-- 2 boinc boinc     15845 Feb 26 04:10 start_atlas.sh
[2026-02-26 06:50:25] drwxrwx--x 2 boinc boinc      4096 Feb 26 04:10 shared
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc         0 Feb 26 04:10 boinc_setup_complete
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc      6205 Feb 26 04:10 init_data.xml
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc         0 Feb 26 04:10 boinc_lockfile
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc      2561 Feb 26 04:10 pandaJob.out
[2026-02-26 06:50:25] -rw------- 1 boinc boinc    997648 Feb 26 04:10 agis_schedconf.cvmfs.json
[2026-02-26 06:50:25] -rw------- 1 boinc boinc   1513015 Feb 26 04:10 agis_ddmendpoints.agis.ALL.json
[2026-02-26 06:50:25] -rw------- 1 boinc boinc       417 Feb 26 04:11 workernode_map.json
[2026-02-26 06:50:25] drwx------ 5 boinc boinc      4096 Feb 26 04:11 pilot3
[2026-02-26 06:50:25] -rw------- 1 boinc boinc 204858275 Feb 26 06:49 HITS.48838506._000146.pool.root.1
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc       529 Feb 26 06:49 boinc_task_state.xml
[2026-02-26 06:50:25] -rw------- 1 boinc boinc      1039 Feb 26 06:49 memory_monitor_summary.json
[2026-02-26 06:50:25] -rw------- 1 boinc boinc    316388 Feb 26 06:49 log.48838506._000146.job.log.tgz.1
[2026-02-26 06:50:25] -rw------- 1 boinc boinc      6314 Feb 26 06:49 heartbeat.json
[2026-02-26 06:50:25] -rw------- 1 boinc boinc        95 Feb 26 06:50 pilot_heartbeat.json
[2026-02-26 06:50:25] -rw------- 1 boinc boinc      4747 Feb 26 06:50 pilotlog.txt
[2026-02-26 06:50:25] -rw------- 1 boinc boinc   1352042 Feb 26 06:50 log.48838506._000146.job.log.1
[2026-02-26 06:50:25] -rw------- 1 boinc boinc       357 Feb 26 06:50 output.list
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc       620 Feb 26 06:50 runtime_log
[2026-02-26 06:50:25] -rw------- 1 boinc boinc   1689600 Feb 26 06:50 result.tar.gz
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc      8192 Feb 26 06:50 boinc_mmap_file
[2026-02-26 06:50:25] -rw------- 1 boinc boinc       660 Feb 26 06:50 xCRNDmlJXF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmoDzKDmV2Tvkn.diag
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc      8896 Feb 26 06:50 runtime_log.err
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc      9957 Feb 26 06:50 stderr.txt
[2026-02-26 06:50:25] -rw-r--r-- 1 boinc boinc        27 Feb 26 06:50 wrapper_checkpoint.txt
[2026-02-26 06:50:26] HITS file was successfully produced:
[2026-02-26 06:50:26] -rw------- 1 boinc boinc 204858275 Feb 26 06:49 shared/HITS.pool.root.1
[2026-02-26 06:50:26]  *** Contents of shared directory: ***
[2026-02-26 06:50:26] total 465776
[2026-02-26 06:50:26] -rw-r--r-- 2 boinc boinc 269777250 Feb 26 04:10 ATLAS.root_0
[2026-02-26 06:50:26] -rw-r--r-- 2 boinc boinc    597949 Feb 26 04:10 input.tar.gz
[2026-02-26 06:50:26] -rw-r--r-- 2 boinc boinc     15845 Feb 26 04:10 start_atlas.sh
[2026-02-26 06:50:26] -rw------- 1 boinc boinc 204858275 Feb 26 06:49 HITS.pool.root.1
[2026-02-26 06:50:26] -rw------- 1 boinc boinc   1689600 Feb 26 06:50 result.tar.gz
06:50:47 (947653): run_atlas exited; CPU time 18546.037222
06:50:47 (947653): called boinc_finish(0)

</stderr_txt>
]]>

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