Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:50:50 (1075661): wrapper (7.7.26015): starting
06:50:50 (1075661): wrapper: running run_atlas (--nthreads 2)
[2026-02-26 06:50:50] Arguments: --nthreads 2
[2026-02-26 06:50:50] Threads: 2
[2026-02-26 06:50:50] Checking for CVMFS
[2026-02-26 06:50:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 06:50:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 06:50:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 06:50:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 06:50:51] 2.9.2.0 617737 772 55012 156644 1 50 25103422 36864000 0 130560 0 205280 99.969 37715 22871 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-26 06:50:51] CVMFS is ok
[2026-02-26 06:50:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 06:50:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 06:50:51] Further information can be found at the LHC@home message board.
[2026-02-26 06:50:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 06:50:51] Checking for apptainer binary...
[2026-02-26 06:50:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 06:50:51] Running /usr/bin/apptainer --version
[2026-02-26 06:50:51] apptainer version 1.4.1-1.1
[2026-02-26 06:50:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 06:50:51] thA369
[2026-02-26 06:50:51] apptainer works
[2026-02-26 06:50:51] Set ATHENA_PROC_NUMBER=2
[2026-02-26 06:50:51] Set ATHENA_CORE_NUMBER=2
[2026-02-26 06:50:51] Starting ATLAS job with PandaID=7030346793
[2026-02-26 06:50:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 09:25:26]  *** The last 200 lines of the pilot log: ***
[2026-02-26 09:25:26] 2026-02-26 08:24:36,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 09:25:26] 2026-02-26 08:24:36,745 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 09:25:26] 2026-02-26 08:24:36,745 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 09:25:26] 2026-02-26 08:24:36,745 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 09:25:26] 2026-02-26 08:24:36,745 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 09:25:26] 2026-02-26 08:24:36,745 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 09:25:26] 2026-02-26 08:24:36,745 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 09:25:26] 2026-02-26 08:24:36,745 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 09:25:26] 2026-02-26 08:24:36,745 | INFO     | job 7030346793 has completed (purged errors)
[2026-02-26 09:25:26] 2026-02-26 08:24:36,745 | INFO     | overall cleanup function is called
[2026-02-26 09:25:26] 2026-02-26 08:24:37,751 | INFO     | --- collectZombieJob: --- 10, [1084447]
[2026-02-26 09:25:26] 2026-02-26 08:24:37,751 | INFO     | zombie collector waiting for pid 1084447
[2026-02-26 09:25:26] 2026-02-26 08:24:37,751 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 09:25:26] 2026-02-26 08:24:37,751 | INFO     | collected zombie processes
[2026-02-26 09:25:26] 2026-02-26 08:24:37,752 | INFO     | will attempt to kill all subprocesses of pid=1084447
[2026-02-26 09:25:26] 2026-02-26 08:24:37,837 | INFO     | process IDs to be killed: [1084447] (in reverse order)
[2026-02-26 09:25:26] 2026-02-26 08:24:37,861 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 09:25:26] 2026-02-26 08:24:37,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 09:25:26] 2026-02-26 08:24:37,862 | INFO     | did not find any defunct processes belonging to 1084447
[2026-02-26 09:25:26] 2026-02-26 08:24:37,864 | INFO     | did not find any defunct processes belonging to 1084447
[2026-02-26 09:25:26] 2026-02-26 08:24:37,864 | INFO     | ready for new job
[2026-02-26 09:25:26] 2026-02-26 08:24:37,864 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 09:25:26] 2026-02-26 08:24:37,864 | INFO     | **************************************
[2026-02-26 09:25:26] 2026-02-26 08:24:37,864 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 09:25:26] 2026-02-26 08:24:37,864 | INFO     | **************************************
[2026-02-26 09:25:26] 2026-02-26 08:24:37,864 | INFO     | 
[2026-02-26 09:25:26] 2026-02-26 08:24:37,865 | INFO     | architecture information:
[2026-02-26 09:25:26] 2026-02-26 08:24:37,865 | INFO     | executing command: cat /etc/os-release
[2026-02-26 09:25:26] 2026-02-26 08:24:37,874 | INFO     | cat /etc/os-release:
[2026-02-26 09:25:26] NAME="CentOS Linux"
[2026-02-26 09:25:26] VERSION="7 (Core)"
[2026-02-26 09:25:26] ID="centos"
[2026-02-26 09:25:26] ID_LIKE="rhel fedora"
[2026-02-26 09:25:26] VERSION_ID="7"
[2026-02-26 09:25:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 09:25:26] ANSI_COLOR="0;31"
[2026-02-26 09:25:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 09:25:26] HOME_URL="https://www.centos.org/"
[2026-02-26 09:25:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 09:25:26] 
[2026-02-26 09:25:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 09:25:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 09:25:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 09:25:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 09:25:26] 
[2026-02-26 09:25:26] 2026-02-26 08:24:37,874 | INFO     | **************************************
[2026-02-26 09:25:26] 2026-02-26 08:24:38,376 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-26 09:25:26] 2026-02-26 08:24:38,393 | INFO     | sufficient remaining disk space (335043100672 B)
[2026-02-26 09:25:26] 2026-02-26 08:24:38,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 09:25:26] 2026-02-26 08:24:38,393 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 09:25:26] 2026-02-26 08:24:38,393 | INFO     | update_server=False
[2026-02-26 09:25:26] 2026-02-26 08:24:38,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 09:25:26] 2026-02-26 08:24:38,393 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-26 09:25:26] 2026-02-26 08:24:38,393 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 09:25:26] 2026-02-26 08:24:38,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 09:25:26] 2026-02-26 08:24:38,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 09:25:26] 2026-02-26 08:24:38,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 09:25:26] 2026-02-26 08:24:38,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 09:25:26] 2026-02-26 08:24:38,582 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 09:25:26] 2026-02-26 08:24:38,582 | INFO     | aborting loop
[2026-02-26 09:25:26] 2026-02-26 08:24:38,989 | INFO     | all data control threads have been joined
[2026-02-26 09:25:26] 2026-02-26 08:24:39,398 | INFO     | [job] retrieve thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:39,399 | INFO     | [job] queue monitor thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:39,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 09:25:26] 2026-02-26 08:24:39,587 | INFO     | [job] job monitor thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:39,626 | INFO     | [payload] failed_post thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:39,787 | INFO     | all payload control threads have been joined
[2026-02-26 09:25:26] 2026-02-26 08:24:39,883 | INFO     | all job control threads have been joined
[2026-02-26 09:25:26] 2026-02-26 08:24:39,994 | INFO     | [data] control thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:40,058 | INFO     | [job] validate thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:40,119 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:40,174 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:40,219 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:40,327 | INFO     | [data] copytool_in thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:40,345 | INFO     | [payload] validate_post thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:40,792 | INFO     | [payload] control thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:40,926 | INFO     | [job] control thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:41,455 | INFO     | [data] copytool_out thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:42,399 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:24:49,339 | INFO     | job.realtimelogging is not enabled
[2026-02-26 09:25:26] 2026-02-26 08:24:50,344 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 09:25:26] 2026-02-26 08:25:21,574 | INFO     | [monitor] cgroup control has ended
[2026-02-26 09:25:26] 2026-02-26 08:25:21,658 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140077446178624)>', '<ExcThread(monitor, started 140076558296832)>']
[2026-02-26 09:25:26] 2026-02-26 08:25:22,613 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 09:25:26] 2026-02-26 08:25:22,613 | INFO     | [monitor] control thread has ended
[2026-02-26 09:25:26] 2026-02-26 08:25:26,683 | INFO     | all workflow threads have been joined
[2026-02-26 09:25:26] 2026-02-26 08:25:26,683 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 09:25:26] 2026-02-26 08:25:26,683 | INFO     | traces error code: 0
[2026-02-26 09:25:26] 2026-02-26 08:25:26,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 09:25:26] 2026-02-26 08:25:26,746 [wrapper] ==== pilot stdout END ====
[2026-02-26 09:25:26] 2026-02-26 08:25:26,748 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 09:25:26] 2026-02-26 08:25:26,751 [wrapper] pilotpid: 1079774
[2026-02-26 09:25:26] 2026-02-26 08:25:26,753 [wrapper] Pilot exit status: 0
[2026-02-26 09:25:26] 2026-02-26 08:25:26,759 [wrapper] pandaids: 7030346793
[2026-02-26 09:25:26] 2026-02-26 08:25:26,775 [wrapper] cleanup supervisor_pilot 1194370 1079775
[2026-02-26 09:25:26] 2026-02-26 08:25:26,777 [wrapper] Test setup, not cleaning
[2026-02-26 09:25:26] 2026-02-26 08:25:26,779 [wrapper] apfmon messages muted
[2026-02-26 09:25:26] 2026-02-26 08:25:26,781 [wrapper] ==== wrapper stdout END ====
[2026-02-26 09:25:26] 2026-02-26 08:25:26,783 [wrapper] ==== wrapper stderr END ====
[2026-02-26 09:25:26]  *** Error codes and diagnostics ***
[2026-02-26 09:25:26]     "exeErrorCode": 0,
[2026-02-26 09:25:26]     "exeErrorDiag": "",
[2026-02-26 09:25:26]     "pilotErrorCode": 0,
[2026-02-26 09:25:26]     "pilotErrorDiag": "",
[2026-02-26 09:25:26]  *** Listing of results directory ***
[2026-02-26 09:25:26] total 469852
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc    584627 Feb 25 17:51 pilot3.tar.gz
[2026-02-26 09:25:26] -rwx------ 1 boinc boinc     36322 Feb 25 17:53 runpilot2-wrapper.sh
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc      5111 Feb 25 17:53 queuedata.json
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc       100 Feb 26 06:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 09:25:26] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 06:50 run_atlas
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc       105 Feb 26 06:50 job.xml
[2026-02-26 09:25:26] -rw-r--r-- 2 boinc boinc 271443227 Feb 26 06:50 EVNT.48220181._000002.pool.root.1
[2026-02-26 09:25:26] -rw-r--r-- 2 boinc boinc    597947 Feb 26 06:50 input.tar.gz
[2026-02-26 09:25:26] -rw-r--r-- 2 boinc boinc     15845 Feb 26 06:50 start_atlas.sh
[2026-02-26 09:25:26] drwxrwx--x 2 boinc boinc      4096 Feb 26 06:50 shared
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc         0 Feb 26 06:50 boinc_setup_complete
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc      6205 Feb 26 06:50 init_data.xml
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc         0 Feb 26 06:50 boinc_lockfile
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc      2559 Feb 26 06:50 pandaJob.out
[2026-02-26 09:25:26] -rw------- 1 boinc boinc    997632 Feb 26 06:51 agis_schedconf.cvmfs.json
[2026-02-26 09:25:26] -rw------- 1 boinc boinc   1513015 Feb 26 06:51 agis_ddmendpoints.agis.ALL.json
[2026-02-26 09:25:26] -rw------- 1 boinc boinc       418 Feb 26 06:51 workernode_map.json
[2026-02-26 09:25:26] drwx------ 5 boinc boinc      4096 Feb 26 06:51 pilot3
[2026-02-26 09:25:26] -rw------- 1 boinc boinc        95 Feb 26 09:24 pilot_heartbeat.json
[2026-02-26 09:25:26] -rw------- 1 boinc boinc 202507178 Feb 26 09:24 HITS.48838506._000050.pool.root.1
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc       529 Feb 26 09:24 boinc_task_state.xml
[2026-02-26 09:25:26] -rw------- 1 boinc boinc      1034 Feb 26 09:24 memory_monitor_summary.json
[2026-02-26 09:25:26] -rw------- 1 boinc boinc    317071 Feb 26 09:24 log.48838506._000050.job.log.tgz.1
[2026-02-26 09:25:26] -rw------- 1 boinc boinc      6304 Feb 26 09:24 heartbeat.json
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc      8192 Feb 26 09:25 boinc_mmap_file
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc        27 Feb 26 09:25 wrapper_checkpoint.txt
[2026-02-26 09:25:26] -rw------- 1 boinc boinc      4624 Feb 26 09:25 pilotlog.txt
[2026-02-26 09:25:26] -rw------- 1 boinc boinc   1309705 Feb 26 09:25 log.48838506._000050.job.log.1
[2026-02-26 09:25:26] -rw------- 1 boinc boinc       357 Feb 26 09:25 output.list
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc       620 Feb 26 09:25 runtime_log
[2026-02-26 09:25:26] -rw------- 1 boinc boinc   1648640 Feb 26 09:25 result.tar.gz
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc      8896 Feb 26 09:25 runtime_log.err
[2026-02-26 09:25:26] -rw------- 1 boinc boinc       659 Feb 26 09:25 N97KDmYJXF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm4u0KDmznPVsm.diag
[2026-02-26 09:25:26] -rw-r--r-- 1 boinc boinc     11629 Feb 26 09:25 stderr.txt
[2026-02-26 09:25:27] HITS file was successfully produced:
[2026-02-26 09:25:27] -rw------- 1 boinc boinc 202507178 Feb 26 09:24 shared/HITS.pool.root.1
[2026-02-26 09:25:27]  *** Contents of shared directory: ***
[2026-02-26 09:25:27] total 465068
[2026-02-26 09:25:27] -rw-r--r-- 2 boinc boinc 271443227 Feb 26 06:50 ATLAS.root_0
[2026-02-26 09:25:27] -rw-r--r-- 2 boinc boinc    597947 Feb 26 06:50 input.tar.gz
[2026-02-26 09:25:27] -rw-r--r-- 2 boinc boinc     15845 Feb 26 06:50 start_atlas.sh
[2026-02-26 09:25:27] -rw------- 1 boinc boinc 202507178 Feb 26 09:24 HITS.pool.root.1
[2026-02-26 09:25:27] -rw------- 1 boinc boinc   1648640 Feb 26 09:25 result.tar.gz
09:25:28 (1075661): run_atlas exited; CPU time 17936.156592
09:25:28 (1075661): called boinc_finish(0)

</stderr_txt>
]]>

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