Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:10:11 (166348): wrapper (7.7.26015): starting
08:10:11 (166348): wrapper: running run_atlas (--nthreads 3)
[2026-02-26 08:10:11] Arguments: --nthreads 3
[2026-02-26 08:10:11] Threads: 3
[2026-02-26 08:10:11] Checking for CVMFS
[2026-02-26 08:10:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 08:10:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 08:10:12] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 08:10:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 08:10:12] 2.9.2.0 38641 844 69036 156646 1 49 28077071 36864001 0 130560 0 360983 99.974 42739 18819 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-26 08:10:12] CVMFS is ok
[2026-02-26 08:10:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 08:10:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 08:10:12] Further information can be found at the LHC@home message board.
[2026-02-26 08:10:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 08:10:12] Checking for apptainer binary...
[2026-02-26 08:10:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 08:10:12] Running /usr/bin/apptainer --version
[2026-02-26 08:10:12] apptainer version 1.4.1-1.1
[2026-02-26 08:10:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 08:10:12] magicA161
[2026-02-26 08:10:12] apptainer works
[2026-02-26 08:10:12] Set ATHENA_PROC_NUMBER=3
[2026-02-26 08:10:12] Set ATHENA_CORE_NUMBER=3
[2026-02-26 08:10:12] Starting ATLAS job with PandaID=7030328135
[2026-02-26 08:10:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 09:45:36]  *** The last 200 lines of the pilot log: ***
[2026-02-26 09:45:36] 2026-02-26 08:44:48,553 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 09:45:36] 2026-02-26 08:44:48,567 | INFO     | [job] validate thread has finished
[2026-02-26 09:45:36] 2026-02-26 08:44:48,573 | INFO     | [payload] failed_post thread has finished
[2026-02-26 09:45:36] 2026-02-26 08:44:48,647 | WARNING  | process 174816 can no longer be monitored (due to stat problems) - aborting
[2026-02-26 09:45:36] 2026-02-26 08:44:48,647 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 09:45:36] 2026-02-26 08:44:48,674 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 09:45:36] 2026-02-26 08:44:48,675 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 09:45:36] 2026-02-26 08:44:48,675 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-26 09:45:36] 2026-02-26 08:44:48,675 | WARNING  | maxPSS not found in memory monitor output
[2026-02-26 09:45:36] 2026-02-26 08:44:48,675 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7030328135/payload.stdout) since it has not been created yet
[2026-02-26 09:45:36] 2026-02-26 08:44:48,675 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-26 09:45:36] 2026-02-26 08:44:48,686 | INFO     | sufficient remaining disk space (375949099008 B)
[2026-02-26 09:45:36] 2026-02-26 08:44:48,686 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-26 09:45:36] 2026-02-26 08:44:48,686 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7030328135/HITS.48838577._000102.pool.root.1 since it does not exist
[2026-02-26 09:45:36] 2026-02-26 08:44:48,722 | INFO     | number of running child processes to parent process 174816: 1
[2026-02-26 09:45:36] 2026-02-26 08:44:48,722 | INFO     | maximum number of monitored processes: 6
[2026-02-26 09:45:36] 2026-02-26 08:44:48,722 | INFO     | aborting job monitoring since job object (job id=7030328135) has expired
[2026-02-26 09:45:36] 2026-02-26 08:44:48,723 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 09:45:36] 2026-02-26 08:44:48,723 | INFO     | will abort loop
[2026-02-26 09:45:36] 2026-02-26 08:44:48,801 | INFO     | [data] copytool_in thread has finished
[2026-02-26 09:45:36] 2026-02-26 08:44:49,728 | INFO     | [job] job monitor thread has finished
[2026-02-26 09:45:36] 2026-02-26 08:44:50,046 | INFO     | [data] copytool_out thread has finished
[2026-02-26 09:45:36] 2026-02-26 08:44:50,710 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 09:45:36] 2026-02-26 08:45:17,730 | INFO     | PID=170387 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-26 09:45:36] 2026-02-26 08:45:17,730 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 09:45:36] 2026-02-26 08:45:17,730 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 09:45:36] 2026-02-26 08:45:17,730 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 09:45:36] 2026-02-26 08:45:30,265 | INFO     | [monitor] cgroup control has ended
[2026-02-26 09:45:36] 2026-02-26 08:45:31,422 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139931060078400)>', '<ExcThread(monitor, started 139930437154560)>']
[2026-02-26 09:45:36] 2026-02-26 08:45:31,803 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 09:45:36] 2026-02-26 08:45:31,803 | INFO     | [monitor] control thread has ended
[2026-02-26 09:45:36] 2026-02-26 08:45:36,448 | INFO     | all workflow threads have been joined
[2026-02-26 09:45:36] 2026-02-26 08:45:36,449 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 09:45:36] 2026-02-26 08:45:36,449 | INFO     | traces error code: 0
[2026-02-26 09:45:36] 2026-02-26 08:45:36,449 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 09:45:36] 2026-02-26 08:45:36,499 [wrapper] ==== pilot stdout END ====
[2026-02-26 09:45:36] 2026-02-26 08:45:36,501 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 09:45:36] 2026-02-26 08:45:36,504 [wrapper] pilotpid: 170387
[2026-02-26 09:45:36] 2026-02-26 08:45:36,506 [wrapper] Pilot exit status: 0
[2026-02-26 09:45:36] 2026-02-26 08:45:36,514 [wrapper] pandaids: 7030328135
[2026-02-26 09:45:36] 2026-02-26 08:45:36,532 [wrapper] cleanup supervisor_pilot  179945 170388
[2026-02-26 09:45:36] 2026-02-26 08:45:36,534 [wrapper] Test setup, not cleaning
[2026-02-26 09:45:36] 2026-02-26 08:45:36,537 [wrapper] apfmon messages muted
[2026-02-26 09:45:36] 2026-02-26 08:45:36,539 [wrapper] ==== wrapper stdout END ====
[2026-02-26 09:45:36] 2026-02-26 08:45:36,542 [wrapper] ==== wrapper stderr END ====
[2026-02-26 09:45:36]  *** Error codes and diagnostics ***
[2026-02-26 09:45:36]     "exeErrorCode": 0,
[2026-02-26 09:45:36]     "exeErrorDiag": "",
[2026-02-26 09:45:36]     "pilotErrorCode": 0,
[2026-02-26 09:45:36]     "pilotErrorDiag": "",
[2026-02-26 09:45:36]  *** Listing of results directory ***
[2026-02-26 09:45:36] total 511024
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc      5111 Feb 25 17:51 queuedata.json
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc    584627 Feb 25 17:51 pilot3.tar.gz
[2026-02-26 09:45:36] -rwx------ 1 boinc boinc     36322 Feb 25 17:51 runpilot2-wrapper.sh
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc       100 Feb 26 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 09:45:36] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 08:10 run_atlas
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc       105 Feb 26 08:10 job.xml
[2026-02-26 09:45:36] -rw-r--r-- 2 boinc boinc 290116341 Feb 26 08:10 EVNT.48220197._000005.pool.root.1
[2026-02-26 09:45:36] -rw-r--r-- 2 boinc boinc    597950 Feb 26 08:10 input.tar.gz
[2026-02-26 09:45:36] -rw-r--r-- 2 boinc boinc     15845 Feb 26 08:10 start_atlas.sh
[2026-02-26 09:45:36] drwxrwx--x 2 boinc boinc      4096 Feb 26 08:10 shared
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc         0 Feb 26 08:10 boinc_setup_complete
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc      6448 Feb 26 08:10 init_data.xml
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc         0 Feb 26 08:10 boinc_lockfile
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc      2564 Feb 26 08:10 pandaJob.out
[2026-02-26 09:45:36] -rw------- 1 boinc boinc    997640 Feb 26 08:10 agis_schedconf.cvmfs.json
[2026-02-26 09:45:36] -rw------- 1 boinc boinc   1513015 Feb 26 08:10 agis_ddmendpoints.agis.ALL.json
[2026-02-26 09:45:36] -rw------- 1 boinc boinc       426 Feb 26 08:10 workernode_map.json
[2026-02-26 09:45:36] drwx------ 5 boinc boinc      4096 Feb 26 08:10 pilot3
[2026-02-26 09:45:36] -rw------- 1 boinc boinc 227120207 Feb 26 09:44 HITS.48838577._000102.pool.root.1
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc       529 Feb 26 09:44 boinc_task_state.xml
[2026-02-26 09:45:36] -rw------- 1 boinc boinc      1028 Feb 26 09:44 memory_monitor_summary.json
[2026-02-26 09:45:36] -rw------- 1 boinc boinc    247313 Feb 26 09:44 log.48838577._000102.job.log.tgz.1
[2026-02-26 09:45:36] -rw------- 1 boinc boinc      6295 Feb 26 09:44 heartbeat.json
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc        27 Feb 26 09:45 wrapper_checkpoint.txt
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc      8192 Feb 26 09:45 boinc_mmap_file
[2026-02-26 09:45:36] -rw------- 1 boinc boinc        95 Feb 26 09:45 pilot_heartbeat.json
[2026-02-26 09:45:36] -rw------- 1 boinc boinc      6246 Feb 26 09:45 pilotlog.txt
[2026-02-26 09:45:36] -rw------- 1 boinc boinc    823716 Feb 26 09:45 log.48838577._000102.job.log.1
[2026-02-26 09:45:36] -rw------- 1 boinc boinc       357 Feb 26 09:45 output.list
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc       620 Feb 26 09:45 runtime_log
[2026-02-26 09:45:36] -rw------- 1 boinc boinc   1085440 Feb 26 09:45 result.tar.gz
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc      8911 Feb 26 09:45 runtime_log.err
[2026-02-26 09:45:36] -rw------- 1 boinc boinc       660 Feb 26 09:45 pZOKDmjHXF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmto0KDmhrhzXo.diag
[2026-02-26 09:45:36] -rw-r--r-- 1 boinc boinc      7488 Feb 26 09:45 stderr.txt
[2026-02-26 09:45:36] HITS file was successfully produced:
[2026-02-26 09:45:36] -rw------- 1 boinc boinc 227120207 Feb 26 09:44 shared/HITS.pool.root.1
[2026-02-26 09:45:36]  *** Contents of shared directory: ***
[2026-02-26 09:45:36] total 506784
[2026-02-26 09:45:36] -rw-r--r-- 2 boinc boinc 290116341 Feb 26 08:10 ATLAS.root_0
[2026-02-26 09:45:36] -rw-r--r-- 2 boinc boinc    597950 Feb 26 08:10 input.tar.gz
[2026-02-26 09:45:36] -rw-r--r-- 2 boinc boinc     15845 Feb 26 08:10 start_atlas.sh
[2026-02-26 09:45:36] -rw------- 1 boinc boinc 227120207 Feb 26 09:44 HITS.pool.root.1
[2026-02-26 09:45:36] -rw------- 1 boinc boinc   1085440 Feb 26 09:45 result.tar.gz
09:45:38 (166348): run_atlas exited; CPU time 16268.249395
09:45:38 (166348): called boinc_finish(0)

</stderr_txt>
]]>

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