Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
17:43:58 (159004): wrapper (7.7.26015): starting
17:43:58 (159004): wrapper: running run_atlas (--nthreads 5)
[2026-02-25 17:43:58] Arguments: --nthreads 5
[2026-02-25 17:43:58] Threads: 5
[2026-02-25 17:43:58] Checking for CVMFS
[2026-02-25 17:43:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-25 17:43:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-25 17:43:59] Running cvmfs_config stat atlas.cern.ch
[2026-02-25 17:43:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-25 17:43:59] 2.13.3.0 5840 262 48864 156631 2 50 8600649 10240000 0 130560 0 309132 99.996 9276 583 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-25 17:43:59] CVMFS is ok
[2026-02-25 17:43:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-25 17:43:59] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-25 17:43:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-25 17:43:59] Further information can be found at the LHC@home message board.
[2026-02-25 17:43:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-25 17:43:59] Checking for apptainer binary...
[2026-02-25 17:43:59] apptainer is not installed, using version from CVMFS
[2026-02-25 17:43:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-25 17:43:59] pots
[2026-02-25 17:43:59] apptainer works
[2026-02-25 17:43:59] Set ATHENA_PROC_NUMBER=5
[2026-02-25 17:43:59] Set ATHENA_CORE_NUMBER=5
[2026-02-25 17:43:59] Starting ATLAS job with PandaID=7030294034
[2026-02-25 17:43:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/home/pepper/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-25 18:19:22]  *** The last 200 lines of the pilot log: ***
[2026-02-25 18:19:22]  ddmendpoint_alt=None
[2026-02-25 18:19:22]  direct_access_lan=False
[2026-02-25 18:19:22]  direct_access_wan=False
[2026-02-25 18:19:22]  domain=
[2026-02-25 18:19:22]  filesize=233706
[2026-02-25 18:19:22]  filetype=log
[2026-02-25 18:19:22]  guid=83980f40-ab21-4e01-b154-73d6dcad56dd
[2026-02-25 18:19:22]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-25 18:19:22]  is_altstaged=None
[2026-02-25 18:19:22]  is_tar=False
[2026-02-25 18:19:22]  lfn=log.48838605._000605.job.log.tgz.1
[2026-02-25 18:19:22]  mtime=0
[2026-02-25 18:19:22]  protocol_id=None
[2026-02-25 18:19:22]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-25 18:19:22]  replicas=None
[2026-02-25 18:19:22]  scope=mc23_13p6TeV
[2026-02-25 18:19:22]  status=None
[2026-02-25 18:19:22]  status_code=0
[2026-02-25 18:19:22]  storage_token=
[2026-02-25 18:19:22]  surl=/home/pepper/slots/7/PanDA_Pilot-7030294034/log.48838605._000605.job.log.tgz.1
[2026-02-25 18:19:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/dc/log.48838605._000605.job.log.tgz.1
[2026-02-25 18:19:22]  workdir=None
[2026-02-25 18:19:22] ]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,350 | INFO     | transferring file log.48838605._000605.job.log.tgz.1 from /home/pepper/slots/7/PanDA_Pilot-7030294034/log.48838605._000605.job.log.tgz.1 to /home/pepper/slots/7/lo
[2026-02-25 18:19:22] 2026-02-25 23:18:33,351 | INFO     | executing command: /usr/bin/env mv /home/pepper/slots/7/PanDA_Pilot-7030294034/log.48838605._000605.job.log.tgz.1 /home/pepper/slots/7/log.48838605._000605.job.log
[2026-02-25 18:19:22] 2026-02-25 23:18:33,358 | INFO     | adding to output.list: log.48838605._000605.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8f/dc/log.48838605._000605.job.log.tg
[2026-02-25 18:19:22] 2026-02-25 23:18:33,359 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-25 18:19:22] 2026-02-25 23:18:33,359 | INFO     | summary of transferred files:
[2026-02-25 18:19:22] 2026-02-25 23:18:33,359 | INFO     |  -- lfn=log.48838605._000605.job.log.tgz.1, status_code=0, status=transferred
[2026-02-25 18:19:22] 2026-02-25 23:18:33,359 | INFO     | stage-out finished correctly
[2026-02-25 18:19:22] 2026-02-25 23:18:33,374 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-25 18:19:22] 2026-02-25 23:18:33,393 | INFO     | job 7030294034 has state=finished
[2026-02-25 18:19:22] 2026-02-25 23:18:33,393 | INFO     | preparing for final server update for job 7030294034 in state='finished'
[2026-02-25 18:19:22] 2026-02-25 23:18:33,393 | INFO     | reading metadata from: /home/pepper/slots/7/PanDA_Pilot-7030294034/jobReport.json
[2026-02-25 18:19:22] 2026-02-25 23:18:33,394 | INFO     | added worker_node to metadata from /home/pepper/slots/7/workernode_map.json
[2026-02-25 18:19:22] 2026-02-25 23:18:33,394 | INFO     | this job has now completed (state=finished)
[2026-02-25 18:19:22] 2026-02-25 23:18:33,394 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-25 18:19:22] 2026-02-25 23:18:33,394 | INFO     | log transfer has been attempted: DONE
[2026-02-25 18:19:22] 2026-02-25 23:18:33,394 | INFO     | job 7030294034 has finished - writing final server update
[2026-02-25 18:19:22] 2026-02-25 23:18:33,394 | INFO     | total number of processed events: 400 (read)
[2026-02-25 18:19:22] 2026-02-25 23:18:33,395 | INFO     | using path: /home/pepper/slots/7/PanDA_Pilot-7030294034/memory_monitor_summary.json (trf name=prmon)
[2026-02-25 18:19:22] 2026-02-25 23:18:33,395 | INFO     | extracted standard info from prmon json
[2026-02-25 18:19:22] 2026-02-25 23:18:33,395 | INFO     | extracted standard memory fields from prmon json
[2026-02-25 18:19:22] 2026-02-25 23:18:33,395 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-25 18:19:22] 2026-02-25 23:18:33,395 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 18:19:22] 2026-02-25 23:18:33,395 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | fitting pss+swap vs Time
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | sum of square deviations: 6094998.0
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | sum of deviations: -1576059806.0
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | mean x: 1772060565.0
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | mean y: 2746031.0
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | intersect: 458226592912.3526
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | chi2: 0.05885067313257975
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | current memory leak: -258.58 B/s (using 27 data points, chi2=0.06)
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | could have reported an average CPU frequency of 2763 MHz (5 samples)
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | ..............................
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | . Timing measurements:
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | . get job = 0 s
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | . initial setup = 4 s
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | . payload setup = 2 s
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | . stage-in = 0 s
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | . payload execution = 2043 s
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | . stage-out = 0 s
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | . log creation = 0 s
[2026-02-25 18:19:22] 2026-02-25 23:18:33,396 | INFO     | ..............................
[2026-02-25 18:19:22] 2026-02-25 23:18:33,762 | INFO     | 
[2026-02-25 18:19:22] 2026-02-25 23:18:33,762 | INFO     | job summary report
[2026-02-25 18:19:22] 2026-02-25 23:18:33,762 | INFO     | --------------------------------------------------
[2026-02-25 18:19:22] 2026-02-25 23:18:33,762 | INFO     | PanDA job id: 7030294034
[2026-02-25 18:19:22] 2026-02-25 23:18:33,762 | INFO     | task id: 48838605
[2026-02-25 18:19:22] 2026-02-25 23:18:33,762 | INFO     | errors: (none)
[2026-02-25 18:19:22] 2026-02-25 23:18:33,762 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | pilot state: finished 
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | transexitcode: 0
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | exeerrorcode: 0
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | exeerrordiag: 
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | exitcode: 0
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | exitmsg: OK
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | cpuconsumptiontime: 9502 s
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | nevents: 400
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | neventsw: 0
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | pid: 167576
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | pgrp: 167576
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | corecount: 5
[2026-02-25 18:19:22] 2026-02-25 23:18:33,763 | INFO     | event service: False
[2026-02-25 18:19:22] 2026-02-25 23:18:33,764 | INFO     | sizes: {0: 2282297, 10: 2282297, 2050: 2307302, 2051: 2316522}
[2026-02-25 18:19:22] 2026-02-25 23:18:33,764 | INFO     | --------------------------------------------------
[2026-02-25 18:19:22] 2026-02-25 23:18:33,764 | INFO     | 
[2026-02-25 18:19:22] 2026-02-25 23:18:33,764 | INFO     | executing command: ls -lF /home/pepper/slots/7
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | job 7030294034 has completed (purged errors)
[2026-02-25 18:19:22] 2026-02-25 23:18:33,782 | INFO     | overall cleanup function is called
[2026-02-25 18:19:22] 2026-02-25 23:18:34,789 | INFO     | --- collectZombieJob: --- 10, [167576]
[2026-02-25 18:19:22] 2026-02-25 23:18:34,789 | INFO     | zombie collector waiting for pid 167576
[2026-02-25 18:19:22] 2026-02-25 23:18:34,789 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-25 18:19:22] 2026-02-25 23:18:34,789 | INFO     | collected zombie processes
[2026-02-25 18:19:22] 2026-02-25 23:18:34,789 | INFO     | will attempt to kill all subprocesses of pid=167576
[2026-02-25 18:19:22] 2026-02-25 23:18:34,835 | INFO     | process IDs to be killed: [167576] (in reverse order)
[2026-02-25 18:19:22] 2026-02-25 23:18:34,879 | WARNING  | found no corresponding commands to process id(s)
[2026-02-25 18:19:22] 2026-02-25 23:18:34,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-25 18:19:22] 2026-02-25 23:18:34,880 | INFO     | did not find any defunct processes belonging to 167576
[2026-02-25 18:19:22] 2026-02-25 23:18:34,881 | INFO     | did not find any defunct processes belonging to 167576
[2026-02-25 18:19:22] 2026-02-25 23:18:34,881 | INFO     | ready for new job
[2026-02-25 18:19:22] 2026-02-25 23:18:34,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-25 18:19:22] 2026-02-25 23:18:34,881 | INFO     | **************************************
[2026-02-25 18:19:22] 2026-02-25 23:18:34,881 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-25 18:19:22] 2026-02-25 23:18:34,882 | INFO     | **************************************
[2026-02-25 18:19:22] 2026-02-25 23:18:34,882 | INFO     | 
[2026-02-25 18:19:22] 2026-02-25 23:18:34,882 | INFO     | architecture information:
[2026-02-25 18:19:22] 2026-02-25 23:18:34,882 | INFO     | executing command: cat /etc/os-release
[2026-02-25 18:19:22] 2026-02-25 23:18:34,888 | INFO     | cat /etc/os-release:
[2026-02-25 18:19:22] NAME="CentOS Linux"
[2026-02-25 18:19:22] VERSION="7 (Core)"
[2026-02-25 18:19:22] ID="centos"
[2026-02-25 18:19:22] ID_LIKE="rhel fedora"
[2026-02-25 18:19:22] VERSION_ID="7"
[2026-02-25 18:19:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-25 18:19:22] ANSI_COLOR="0;31"
[2026-02-25 18:19:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-25 18:19:22] HOME_URL="https://www.centos.org/"
[2026-02-25 18:19:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-25 18:19:22] 
[2026-02-25 18:19:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-25 18:19:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-25 18:19:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-25 18:19:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-25 18:19:22] 
[2026-02-25 18:19:22] 2026-02-25 23:18:34,888 | INFO     | **************************************
[2026-02-25 18:19:22] 2026-02-25 23:18:35,391 | INFO     | executing command: df -mP /home/pepper/slots/7
[2026-02-25 18:19:22] 2026-02-25 23:18:35,408 | INFO     | sufficient remaining disk space (480161824768 B)
[2026-02-25 18:19:22] 2026-02-25 23:18:35,408 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-25 18:19:22] 2026-02-25 23:18:35,408 | INFO     | current server update state: UPDATING_FINAL
[2026-02-25 18:19:22] 2026-02-25 23:18:35,408 | INFO     | update_server=False
[2026-02-25 18:19:22] 2026-02-25 23:18:35,408 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-25 18:19:22] 2026-02-25 23:18:35,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-25 18:19:22] 2026-02-25 23:18:35,408 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-25 18:19:22] 2026-02-25 23:18:35,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-25 18:19:22] 2026-02-25 23:18:35,409 | INFO     | aborting loop
[2026-02-25 18:19:22] 2026-02-25 23:18:35,946 | INFO     | all job control threads have been joined
[2026-02-25 18:19:22] 2026-02-25 23:18:36,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-25 18:19:22] 2026-02-25 23:18:36,411 | INFO     | [job] retrieve thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:36,413 | INFO     | [job] queue monitor thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:36,414 | INFO     | [job] job monitor thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:36,448 | INFO     | all data control threads have been joined
[2026-02-25 18:19:22] 2026-02-25 23:18:36,492 | INFO     | [data] copytool_in thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:36,585 | INFO     | [payload] validate_post thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:36,811 | INFO     | all payload control threads have been joined
[2026-02-25 18:19:22] 2026-02-25 23:18:36,951 | INFO     | [job] control thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:37,453 | INFO     | [data] control thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:37,663 | INFO     | [payload] failed_post thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:37,817 | INFO     | [payload] control thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:37,833 | INFO     | [job] validate thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:37,843 | INFO     | [payload] execute_payloads thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:37,877 | INFO     | [job] create_data_payload thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:37,879 | INFO     | [payload] validate_pre thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:38,384 | INFO     | [data] copytool_out thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:39,415 | INFO     | [data] queue_monitor thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:18:45,911 | INFO     | job.realtimelogging is not enabled
[2026-02-25 18:19:22] 2026-02-25 23:18:46,917 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-25 18:19:22] 2026-02-25 23:19:05,351 | INFO     | PID=163101 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-25 18:19:22] 2026-02-25 23:19:05,351 | INFO     | found 0 job(s) in 20 queues
[2026-02-25 18:19:22] 2026-02-25 23:19:05,351 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-25 18:19:22] 2026-02-25 23:19:05,351 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-25 18:19:22] 2026-02-25 23:19:14,784 | INFO     | [monitor] cgroup control has ended
[2026-02-25 18:19:22] 2026-02-25 23:19:16,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125673974445888)>', '<ExcThread(monitor, started 125673452578560)>']
[2026-02-25 18:19:22] 2026-02-25 23:19:17,403 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-25 18:19:22] 2026-02-25 23:19:17,403 | INFO     | [monitor] control thread has ended
[2026-02-25 18:19:22] 2026-02-25 23:19:21,721 | INFO     | all workflow threads have been joined
[2026-02-25 18:19:22] 2026-02-25 23:19:21,722 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-25 18:19:22] 2026-02-25 23:19:21,722 | INFO     | traces error code: 0
[2026-02-25 18:19:22] 2026-02-25 23:19:21,722 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-25 18:19:22] 2026-02-25 23:19:21,770 [wrapper] ==== pilot stdout END ====
[2026-02-25 18:19:22] 2026-02-25 23:19:21,773 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-25 18:19:22] 2026-02-25 23:19:21,774 [wrapper] pilotpid: 163101
[2026-02-25 18:19:22] 2026-02-25 23:19:21,776 [wrapper] Pilot exit status: 0
[2026-02-25 18:19:22] 2026-02-25 23:19:21,780 [wrapper] pandaids: 7030294034
[2026-02-25 18:19:22] 2026-02-25 23:19:21,796 [wrapper] cleanup supervisor_pilot  178651 163102
[2026-02-25 18:19:22] 2026-02-25 23:19:21,798 [wrapper] Test setup, not cleaning
[2026-02-25 18:19:22] 2026-02-25 23:19:21,800 [wrapper] apfmon messages muted
[2026-02-25 18:19:22] 2026-02-25 23:19:21,801 [wrapper] ==== wrapper stdout END ====
[2026-02-25 18:19:22] 2026-02-25 23:19:21,803 [wrapper] ==== wrapper stderr END ====
[2026-02-25 18:19:22]  *** Error codes and diagnostics ***
[2026-02-25 18:19:22]     "exeErrorCode": 0,
[2026-02-25 18:19:22]     "exeErrorDiag": "",
[2026-02-25 18:19:22]     "pilotErrorCode": 0,
[2026-02-25 18:19:22]     "pilotErrorDiag": "",
[2026-02-25 18:19:22]  *** Listing of results directory ***
[2026-02-25 18:19:22] total 488992
[2026-02-25 18:19:22] -rw-r--r-- 1 pepper pepper    584627 Feb 25 10:36 pilot3.tar.gz
[2026-02-25 18:19:22] -rwx------ 1 pepper pepper     36322 Feb 25 10:38 runpilot2-wrapper.sh
[2026-02-25 18:19:22] -rw-r--r-- 1 pepper pepper      5111 Feb 25 10:41 queuedata.json
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper       100 Feb 25 17:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-25 18:19:22] -rwxr-xr-x 1 pepper pepper      7986 Feb 25 17:43 run_atlas
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper       105 Feb 25 17:43 job.xml
[2026-02-25 18:19:22] -rw-r--r-- 2 pepper pepper 281674333 Feb 25 17:43 EVNT.48343768._000025.pool.root.1
[2026-02-25 18:19:22] -rw-r--r-- 2 pepper pepper    597958 Feb 25 17:43 input.tar.gz
[2026-02-25 18:19:22] -rw-r--r-- 2 pepper pepper     15845 Feb 25 17:43 start_atlas.sh
[2026-02-25 18:19:22] drwxrwx--x 2 pepper pepper      4096 Feb 25 17:43 shared
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper         0 Feb 25 17:43 boinc_setup_complete
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper      9043 Feb 25 17:43 init_data.xml
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper         0 Feb 25 17:43 boinc_lockfile
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper      2562 Feb 25 17:43 pandaJob.out
[2026-02-25 18:19:22] -rw------- 1 pepper pepper    995706 Feb 25 17:44 agis_schedconf.cvmfs.json
[2026-02-25 18:19:22] -rw------- 1 pepper pepper   1513015 Feb 25 17:44 agis_ddmendpoints.agis.ALL.json
[2026-02-25 18:19:22] -rw------- 1 pepper pepper       416 Feb 25 17:44 workernode_map.json
[2026-02-25 18:19:22] drwx------ 5 pepper pepper      4096 Feb 25 17:44 pilot3
[2026-02-25 18:19:22] -rw------- 1 pepper pepper 213981914 Feb 25 18:18 HITS.48838605._000605.pool.root.1
[2026-02-25 18:19:22] -rw------- 1 pepper pepper        95 Feb 25 18:18 pilot_heartbeat.json
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper       528 Feb 25 18:18 boinc_task_state.xml
[2026-02-25 18:19:22] -rw------- 1 pepper pepper      1016 Feb 25 18:18 memory_monitor_summary.json
[2026-02-25 18:19:22] -rw------- 1 pepper pepper    233706 Feb 25 18:18 log.48838605._000605.job.log.tgz.1
[2026-02-25 18:19:22] -rw------- 1 pepper pepper      6266 Feb 25 18:18 heartbeat.json
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper        26 Feb 25 18:19 wrapper_checkpoint.txt
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper      8192 Feb 25 18:19 boinc_mmap_file
[2026-02-25 18:19:22] -rw------- 1 pepper pepper      4814 Feb 25 18:19 pilotlog.txt
[2026-02-25 18:19:22] -rw------- 1 pepper pepper    333313 Feb 25 18:19 log.48838605._000605.job.log.1
[2026-02-25 18:19:22] -rw------- 1 pepper pepper       357 Feb 25 18:19 output.list
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper       620 Feb 25 18:19 runtime_log
[2026-02-25 18:19:22] -rw------- 1 pepper pepper    583680 Feb 25 18:19 result.tar.gz
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper      8726 Feb 25 18:19 runtime_log.err
[2026-02-25 18:19:22] -rw------- 1 pepper pepper       638 Feb 25 18:19 Ig3LDmV9VF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmduyKDm3YN8Ko.diag
[2026-02-25 18:19:22] -rw-rw-r-- 1 pepper pepper     20873 Feb 25 18:19 stderr.txt
[2026-02-25 18:19:22] HITS file was successfully produced:
[2026-02-25 18:19:22] -rw------- 1 pepper pepper 213981914 Feb 25 18:18 shared/HITS.pool.root.1
[2026-02-25 18:19:22]  *** Contents of shared directory: ***
[2026-02-25 18:19:22] total 485224
[2026-02-25 18:19:22] -rw-r--r-- 2 pepper pepper 281674333 Feb 25 17:43 ATLAS.root_0
[2026-02-25 18:19:22] -rw-r--r-- 2 pepper pepper    597958 Feb 25 17:43 input.tar.gz
[2026-02-25 18:19:22] -rw-r--r-- 2 pepper pepper     15845 Feb 25 17:43 start_atlas.sh
[2026-02-25 18:19:22] -rw------- 1 pepper pepper 213981914 Feb 25 18:18 HITS.pool.root.1
[2026-02-25 18:19:22] -rw------- 1 pepper pepper    583680 Feb 25 18:19 result.tar.gz
18:19:25 (159004): run_atlas exited; CPU time 9510.998931
18:19:25 (159004): called boinc_finish(0)

</stderr_txt>
]]>

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