Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:47:11 (1718134): wrapper (7.7.26015): starting
16:47:11 (1718134): wrapper: running run_atlas (--nthreads 8)
[2026-02-25 16:47:11] Arguments: --nthreads 8
[2026-02-25 16:47:11] Threads: 8
[2026-02-25 16:47:11] Checking for CVMFS
[2026-02-25 16:47:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-25 16:47:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-25 16:47:12] Running cvmfs_config stat atlas.cern.ch
[2026-02-25 16:47:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-25 16:47:13] 2.11.3.0 700522 125106 159568 156636 2 556 35022047 45568000 16671 130560 0 701363474 99.802 412861241 17777 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-25 16:47:13] CVMFS is ok
[2026-02-25 16:47:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-25 16:47:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-25 16:47:13] Further information can be found at the LHC@home message board.
[2026-02-25 16:47:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-25 16:47:13] Checking for apptainer binary...
[2026-02-25 16:47:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-25 16:47:13] Running /usr/bin/apptainer --version
[2026-02-25 16:47:19] apptainer version 1.4.1-1.el9
[2026-02-25 16:47:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-25 16:47:20] wns0006.triumf.lcg
[2026-02-25 16:47:20] apptainer works
[2026-02-25 16:47:20] Set ATHENA_PROC_NUMBER=8
[2026-02-25 16:47:20] Set ATHENA_CORE_NUMBER=8
[2026-02-25 16:47:20] Starting ATLAS job with PandaID=7030372935
[2026-02-25 16:47:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-25 16:54:09]  *** The last 200 lines of the pilot log: ***
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 16:54:09] 2026-02-26 00:52:57,363 | WARNING  | wrong length of table data, x=[1772066969.0, 1772067030.0], y=[1169.0, 567073.0] (must be same and length>=4)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,363 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,363 | INFO     | ..............................
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . Timing measurements:
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . get job = 0 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . initial setup = 21 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . payload setup = 40 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . stage-in = 0 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | . payload execution = 115 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | . stage-out = 2 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | . log creation = 0 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | ..............................
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030372935/pilotlog.txt
[2026-02-25 16:54:09] 2026-02-26 00:52:57,455 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-25 16:54:09] - Log from pilotlog.txt -
[2026-02-25 16:54:09] 2026-02-26 00:52:57,361 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7030372935/memory_monitor_summary.json (trf name=prmon)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | INFO     | extracted standard info from prmon json
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | INFO     | extracted standard memory fields from prmon json
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 16:54:09] 2026-02-26 00:52:57,363 | WARNING  | wrong length of table data, x=[1772066969.0, 1772067030.0], y=[1169.0, 567073.0] (must be same and length>=4)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,363 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,363 | INFO     | ..............................
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . Timing measurements:
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . get job = 0 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . initial setup = 21 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . payload setup = 40 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . stage-in = 0 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | . payload execution = 115 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | . stage-out = 2 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | . log creation = 0 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | ..............................
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030372935/pilotlog.txt
[2026-02-25 16:54:09] 2026-02-26 00:52:57,456 | WARNING  | 
[2026-02-25 16:54:09] [begin log extracts]
[2026-02-25 16:54:09] - Log from pilotlog.txt -
[2026-02-25 16:54:09] 2026-02-26 00:52:57,361 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7030372935/memory_monitor_summary.json (trf name=prmon)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | INFO     | extracted standard info from prmon json
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | INFO     | extracted standard memory fields from prmon json
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 16:54:09] 2026-02-26 00:52:57,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 16:54:09] 2026-02-26 00:52:57,363 | WARNING  | wrong length of table data, x=[1772066969.0, 1772067030.0], y=[1169.0, 567073.0] (must be same and length>=4)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,363 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,363 | INFO     | ..............................
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . Timing measurements:
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . get job = 0 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . initial setup = 21 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . payload setup = 40 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,382 | INFO     | . stage-in = 0 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | . payload execution = 115 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | . stage-out = 2 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | . log creation = 0 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | ..............................
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-25 16:54:09] 2026-02-26 00:52:57,383 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030372935/pilotlog.txt
[2026-02-25 16:54:09] [end log extracts]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,456 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,456 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-25 16:54:09] 2026-02-26 00:52:57,605 | INFO     | time since job start (297s) is within the limit (349056.0s)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,635 | INFO     | 
[2026-02-25 16:54:09] 2026-02-26 00:52:57,635 | INFO     | job summary report
[2026-02-25 16:54:09] 2026-02-26 00:52:57,635 | INFO     | --------------------------------------------------
[2026-02-25 16:54:09] 2026-02-26 00:52:57,635 | INFO     | PanDA job id: 7030372935
[2026-02-25 16:54:09] 2026-02-26 00:52:57,635 | INFO     | task id: 48838492
[2026-02-25 16:54:09] 2026-02-26 00:52:57,635 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-25 16:50:40,499 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | pilot state: failed 
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | transexitcode: 65
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | exeerrorcode: 65
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | exitcode: 65
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | cpuconsumptiontime: 17 s
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | nevents: 0
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | neventsw: 0
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | pid: 1742591
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | pgrp: 1742591
[2026-02-25 16:54:09] 2026-02-26 00:52:57,636 | INFO     | corecount: 8
[2026-02-25 16:54:09] 2026-02-26 00:52:57,637 | INFO     | event service: False
[2026-02-25 16:54:09] 2026-02-26 00:52:57,637 | INFO     | sizes: {0: 2281171, 1: 2281853, 2: 2282314, 13: 2282314, 161: 2305594, 164: 2309886, 166: 2310042, 284: 2310208}
[2026-02-25 16:54:09] 2026-02-26 00:52:57,637 | INFO     | --------------------------------------------------
[2026-02-25 16:54:09] 2026-02-26 00:52:57,637 | INFO     | 
[2026-02-25 16:54:09] 2026-02-26 00:52:57,637 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-25 16:54:09] 2026-02-26 00:52:57,740 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,741 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,741 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,741 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,741 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,741 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,741 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,741 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,741 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,742 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,742 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,742 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,742 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,742 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-25 16:54:09] 2026-02-26 00:52:57,742 | INFO     | job 7030372935 has completed (purged errors)
[2026-02-25 16:54:09] 2026-02-26 00:52:57,743 | INFO     | overall cleanup function is called
[2026-02-25 16:54:09] 2026-02-26 00:52:58,788 | INFO     | --- collectZombieJob: --- 10, [1742591]
[2026-02-25 16:54:09] 2026-02-26 00:52:58,788 | INFO     | zombie collector waiting for pid 1742591
[2026-02-25 16:54:09] 2026-02-26 00:52:58,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-25 16:54:09] 2026-02-26 00:52:58,788 | INFO     | collected zombie processes
[2026-02-25 16:54:09] 2026-02-26 00:52:58,789 | INFO     | will attempt to kill all subprocesses of pid=1742591
[2026-02-25 16:54:09] 2026-02-26 00:52:59,196 | INFO     | process IDs to be killed: [1742591] (in reverse order)
[2026-02-25 16:54:09] 2026-02-26 00:52:59,521 | WARNING  | found no corresponding commands to process id(s)
[2026-02-25 16:54:09] 2026-02-26 00:52:59,521 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-25 16:54:09] 2026-02-26 00:52:59,529 | INFO     | did not find any defunct processes belonging to 1742591
[2026-02-25 16:54:09] 2026-02-26 00:52:59,537 | INFO     | did not find any defunct processes belonging to 1742591
[2026-02-25 16:54:09] 2026-02-26 00:52:59,537 | INFO     | ready for new job
[2026-02-25 16:54:09] 2026-02-26 00:52:59,537 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-25 16:54:09] 2026-02-26 00:52:59,538 | INFO     | **************************************
[2026-02-25 16:54:09] 2026-02-26 00:52:59,539 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-25 16:54:09] 2026-02-26 00:52:59,539 | INFO     | **************************************
[2026-02-25 16:54:09] 2026-02-26 00:52:59,539 | INFO     | 
[2026-02-25 16:54:09] 2026-02-26 00:52:59,540 | INFO     | architecture information:
[2026-02-25 16:54:09] 2026-02-26 00:52:59,540 | INFO     | executing command: cat /etc/os-release
[2026-02-25 16:54:09] 2026-02-26 00:52:59,553 | INFO     | cat /etc/os-release:
[2026-02-25 16:54:09] NAME="CentOS Linux"
[2026-02-25 16:54:09] VERSION="7 (Core)"
[2026-02-25 16:54:09] ID="centos"
[2026-02-25 16:54:09] ID_LIKE="rhel fedora"
[2026-02-25 16:54:09] VERSION_ID="7"
[2026-02-25 16:54:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-25 16:54:09] ANSI_COLOR="0;31"
[2026-02-25 16:54:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-25 16:54:09] HOME_URL="https://www.centos.org/"
[2026-02-25 16:54:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-25 16:54:09] 
[2026-02-25 16:54:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-25 16:54:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-25 16:54:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-25 16:54:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-25 16:54:09] 
[2026-02-25 16:54:09] 2026-02-26 00:52:59,553 | INFO     | **************************************
[2026-02-25 16:54:09] 2026-02-26 00:53:00,063 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-25 16:54:09] 2026-02-26 00:53:00,129 | INFO     | sufficient remaining disk space (1163946622976 B)
[2026-02-25 16:54:09] 2026-02-26 00:53:00,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-25 16:54:09] 2026-02-26 00:53:00,130 | INFO     | current server update state: UPDATING_FINAL
[2026-02-25 16:54:09] 2026-02-26 00:53:00,130 | INFO     | update_server=False
[2026-02-25 16:54:09] 2026-02-26 00:53:00,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-25 16:54:09] 2026-02-26 00:53:00,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-25 16:54:09] 2026-02-26 00:53:00,131 | INFO     | aborting loop
[2026-02-25 16:54:09] 2026-02-26 00:53:00,223 | INFO     | all payload control threads have been joined
[2026-02-25 16:54:09] 2026-02-26 00:53:00,251 | INFO     | all job control threads have been joined
[2026-02-25 16:54:09] 2026-02-26 00:53:00,534 | INFO     | all data control threads have been joined
[2026-02-25 16:54:09] 2026-02-26 00:53:00,597 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-25 16:54:09] 2026-02-26 00:53:01,136 | INFO     | [job] retrieve thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:01,137 | INFO     | [job] job monitor thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:01,229 | INFO     | [payload] control thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:01,257 | INFO     | [job] control thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:01,527 | INFO     | [payload] failed_post thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:01,552 | INFO     | [data] control thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:01,579 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:01,657 | INFO     | [payload] validate_pre thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:01,673 | INFO     | [data] copytool_in thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:01,702 | INFO     | [job] validate thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:01,733 | INFO     | [payload] validate_post thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:02,035 | INFO     | [job] create_data_payload thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:02,256 | INFO     | [payload] execute_payloads thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:02,621 | INFO     | [data] copytool_out thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:02,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-25 16:54:09] 2026-02-26 00:53:02,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-25 16:54:09] 2026-02-26 00:53:03,664 | INFO     | [job] queue monitor thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:06,711 | INFO     | [data] queue_monitor thread has finished
[2026-02-25 16:54:09] 2026-02-26 00:53:31,309 | INFO     | PID=1732149 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-25 16:54:09] 2026-02-26 00:53:31,309 | INFO     | .. there are 26 such processes running
[2026-02-25 16:54:09] 2026-02-26 00:53:31,309 | INFO     | found 0 job(s) in 20 queues
[2026-02-25 16:54:09] 2026-02-26 00:53:31,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-25 16:54:09] 2026-02-26 00:53:31,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-25 16:54:09] 2026-02-26 00:54:00,194 | INFO     | [monitor] cgroup control has ended
[2026-02-25 16:54:09] 2026-02-26 00:54:01,748 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139743582136128)>', '<ExcThread(monitor, started 139743018850048)>']
[2026-02-25 16:54:09] 2026-02-26 00:54:02,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-25 16:54:09] 2026-02-26 00:54:02,514 | INFO     | [monitor] control thread has ended
[2026-02-25 16:54:09] 2026-02-26 00:54:06,774 | INFO     | all workflow threads have been joined
[2026-02-25 16:54:09] 2026-02-26 00:54:06,774 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-25 16:54:09] 2026-02-26 00:54:06,775 | INFO     | traces error code: 0
[2026-02-25 16:54:09] 2026-02-26 00:54:06,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-25 16:54:09] 2026-02-26 00:54:07,496 [wrapper] ==== pilot stdout END ====
[2026-02-25 16:54:09] 2026-02-26 00:54:07,541 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-25 16:54:09] 2026-02-26 00:54:07,564 [wrapper] pilotpid: 1732149
[2026-02-25 16:54:09] 2026-02-26 00:54:07,598 [wrapper] Pilot exit status: 0
[2026-02-25 16:54:09] 2026-02-26 00:54:07,758 [wrapper] pandaids: 7030372935
[2026-02-25 16:54:09] 2026-02-26 00:54:08,348 [wrapper] cleanup supervisor_pilot 1732160 1732151
[2026-02-25 16:54:09] 2026-02-26 00:54:08,385 [wrapper] Test setup, not cleaning
[2026-02-25 16:54:09] 2026-02-26 00:54:08,433 [wrapper] apfmon messages muted
[2026-02-25 16:54:09] 2026-02-26 00:54:08,482 [wrapper] ==== wrapper stdout END ====
[2026-02-25 16:54:09] 2026-02-26 00:54:08,529 [wrapper] ==== wrapper stderr END ====
[2026-02-25 16:54:09]  *** Error codes and diagnostics ***
[2026-02-25 16:54:09]     "exeErrorCode": 65,
[2026-02-25 16:54:09]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-25 16:54:09]     "pilotErrorCode": 1305,
[2026-02-25 16:54:09]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-25 16:54:09]  *** Listing of results directory ***
[2026-02-25 16:54:09] total 284168
[2026-02-25 16:54:09] -rwx------. 1 boinc boinc     36322 Feb 25 12:35 runpilot2-wrapper.sh
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc      5111 Feb 25 12:36 queuedata.json
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc    584627 Feb 25 12:36 pilot3.tar.gz
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc       100 Feb 25 16:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-25 16:54:09] -rwxr-xr-x. 1 boinc boinc      7986 Feb 25 16:46 run_atlas
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc       105 Feb 25 16:46 job.xml
[2026-02-25 16:54:09] -rw-r--r--. 2 boinc boinc 286818699 Feb 25 16:47 EVNT.48220165._000046.pool.root.1
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc      6443 Feb 25 16:47 init_data.xml
[2026-02-25 16:54:09] -rw-r--r--. 2 boinc boinc    597951 Feb 25 16:47 input.tar.gz
[2026-02-25 16:54:09] drwxrwx--x. 2 boinc boinc      4096 Feb 25 16:47 shared
[2026-02-25 16:54:09] -rw-r--r--. 2 boinc boinc     15845 Feb 25 16:47 start_atlas.sh
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc         0 Feb 25 16:47 boinc_lockfile
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc      2554 Feb 25 16:47 pandaJob.out
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc    997624 Feb 25 16:47 agis_schedconf.cvmfs.json
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc   1513015 Feb 25 16:47 agis_ddmendpoints.agis.ALL.json
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc       436 Feb 25 16:47 workernode_map.json
[2026-02-25 16:54:09] drwx------. 5 boinc boinc      4096 Feb 25 16:48 pilot3
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc       524 Feb 25 16:50 boinc_task_state.xml
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc       993 Feb 25 16:50 memory_monitor_summary.json
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc     23102 Feb 25 16:50 log.48838492._001129.job.log.tgz.1
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc        95 Feb 25 16:52 pilot_heartbeat.json
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc      7030 Feb 25 16:52 heartbeat.json
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc      8192 Feb 25 16:54 boinc_mmap_file
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc      4819 Feb 25 16:54 pilotlog.txt
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc        23 Feb 25 16:54 wrapper_checkpoint.txt
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc     96884 Feb 25 16:54 log.48838492._001129.job.log.1
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc       188 Feb 25 16:54 output.list
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc       620 Feb 25 16:54 runtime_log
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc    143360 Feb 25 16:54 result.tar.gz
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc       648 Feb 25 16:54 smTNDmpmaF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmn90KDm113Vlm.diag
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc      8633 Feb 25 16:54 runtime_log.err
[2026-02-25 16:54:09] -rw-r--r--. 1 boinc boinc     21884 Feb 25 16:54 stderr.txt
[2026-02-25 16:54:09] No HITS result produced
[2026-02-25 16:54:09]  *** Contents of shared directory: ***
[2026-02-25 16:54:09] total 280844
[2026-02-25 16:54:09] -rw-r--r--. 2 boinc boinc 286818699 Feb 25 16:47 ATLAS.root_0
[2026-02-25 16:54:09] -rw-r--r--. 2 boinc boinc    597951 Feb 25 16:47 input.tar.gz
[2026-02-25 16:54:09] -rw-r--r--. 2 boinc boinc     15845 Feb 25 16:47 start_atlas.sh
[2026-02-25 16:54:09] -rw-------. 1 boinc boinc    143360 Feb 25 16:54 result.tar.gz
16:54:11 (1718134): run_atlas exited; CPU time 27.142211
16:54:11 (1718134): called boinc_finish(0)

</stderr_txt>
]]>

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