Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:51:18 (1933825): wrapper (7.7.26015): starting
16:51:18 (1933825): wrapper: running run_atlas (--nthreads 4)
[2026-02-26 16:51:18] Arguments: --nthreads 4
[2026-02-26 16:51:18] Threads: 4
[2026-02-26 16:51:18] Checking for CVMFS
[2026-02-26 16:51:18] No cvmfs_config command found, will try listing directly
[2026-02-26 16:51:18] CVMFS is ok
[2026-02-26 16:51:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 16:51:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 16:51:18] Further information can be found at the LHC@home message board.
[2026-02-26 16:51:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 16:51:18] Checking for apptainer binary...
[2026-02-26 16:51:18] which: no apptainer in ((null))
[2026-02-26 16:51:18] apptainer is not installed, using version from CVMFS
[2026-02-26 16:51:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 16:51:18] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot88/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2026-02-26 16:51:18] apptainer works
[2026-02-26 16:51:18] Set ATHENA_PROC_NUMBER=4
[2026-02-26 16:51:18] Set ATHENA_CORE_NUMBER=4
[2026-02-26 16:51:18] Starting ATLAS job with PandaID=7030349119
[2026-02-26 16:51:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot88/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 20:19:18]  *** The last 200 lines of the pilot log: ***
[2026-02-26 20:19:18] 2026-02-26 19:16:07,775 | INFO     | mean x: 1772127232.0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,775 | INFO     | mean y: 2326263.6815920398
[2026-02-26 20:19:18] 2026-02-26 19:16:07,775 | INFO     | intersect: -9151280516.795435
[2026-02-26 20:19:18] 2026-02-26 19:16:07,775 | INFO     | chi2: 2.031538559548914
[2026-02-26 20:19:18] 2026-02-26 19:16:07,776 | INFO     | sum of square deviations: 2334722845.0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,777 | INFO     | sum of deviations: 24460288709.5
[2026-02-26 20:19:18] 2026-02-26 19:16:07,777 | INFO     | mean x: 1772127079.5
[2026-02-26 20:19:18] 2026-02-26 19:16:07,777 | INFO     | mean y: 2335594.974489796
[2026-02-26 20:19:18] 2026-02-26 19:16:07,777 | INFO     | intersect: -18563782472.240063
[2026-02-26 20:19:18] 2026-02-26 19:16:07,778 | INFO     | chi2: 1.3318509270946768
[2026-02-26 20:19:18] 2026-02-26 19:16:07,778 | INFO     | current chi2=1.3318509270946768 (change=34.441267637548414 %)
[2026-02-26 20:19:18] 2026-02-26 19:16:07,778 | INFO     | sum of square deviations: 2160561440.0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,779 | INFO     | sum of deviations: 23820292051.0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,779 | INFO     | mean x: 1772126927.0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,779 | INFO     | mean y: 2335034.382198953
[2026-02-26 20:19:18] 2026-02-26 19:16:07,780 | INFO     | intersect: -19535448141.356216
[2026-02-26 20:19:18] 2026-02-26 19:16:07,780 | INFO     | chi2: 1.3325788486754238
[2026-02-26 20:19:18] 2026-02-26 19:16:07,780 | INFO     | current chi2=1.3325788486754238 (change=-0.05465488411190821 %)
[2026-02-26 20:19:18] 2026-02-26 19:16:07,780 | INFO     | right removable region: 190
[2026-02-26 20:19:18] 2026-02-26 19:16:07,780 | INFO     | sum of square deviations: 2334722845.0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,782 | INFO     | sum of deviations: -12252159636.0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,782 | INFO     | mean x: 1772127384.5
[2026-02-26 20:19:18] 2026-02-26 19:16:07,782 | INFO     | mean y: 2347005.1836734693
[2026-02-26 20:19:18] 2026-02-26 19:16:07,782 | INFO     | intersect: 9302117920.913568
[2026-02-26 20:19:18] 2026-02-26 19:16:07,782 | INFO     | chi2: 0.7318963442350193
[2026-02-26 20:19:18] 2026-02-26 19:16:07,782 | INFO     | current chi2=0.7318963442350193 (change=63.97329793250242 %)
[2026-02-26 20:19:18] 2026-02-26 19:16:07,783 | INFO     | sum of square deviations: 2160561440.0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,784 | INFO     | sum of deviations: -12809215174.0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,784 | INFO     | mean x: 1772127537.0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,784 | INFO     | mean y: 2347466.7905759164
[2026-02-26 20:19:18] 2026-02-26 19:16:07,784 | INFO     | intersect: 10508673515.636309
[2026-02-26 20:19:18] 2026-02-26 19:16:07,784 | INFO     | chi2: 0.7260288020589523
[2026-02-26 20:19:18] 2026-02-26 19:16:07,785 | INFO     | current chi2=0.7260288020589523 (change=0.8016903243586733 %)
[2026-02-26 20:19:18] 2026-02-26 19:16:07,785 | INFO     | left removable region: 20
[2026-02-26 20:19:18] 2026-02-26 19:16:07,785 | INFO     | sum of square deviations: 1523386702.5
[2026-02-26 20:19:18] 2026-02-26 19:16:07,786 | INFO     | sum of deviations: 1836175914.4999988
[2026-02-26 20:19:18] 2026-02-26 19:16:07,786 | INFO     | mean x: 1772127506.5
[2026-02-26 20:19:18] 2026-02-26 19:16:07,786 | INFO     | mean y: 2354566.1705882354
[2026-02-26 20:19:18] 2026-02-26 19:16:07,786 | INFO     | intersect: -2133634831.3463168
[2026-02-26 20:19:18] 2026-02-26 19:16:07,787 | INFO     | chi2: 0.0031616968473241348
[2026-02-26 20:19:18] 2026-02-26 19:16:07,787 | INFO     | current memory leak: 1.21 B/s (using 170 data points, chi2=0.00)
[2026-02-26 20:19:18] 2026-02-26 19:16:07,787 | INFO     | could have reported an average CPU frequency of 2688 MHz (10 samples)
[2026-02-26 20:19:18] 2026-02-26 19:16:07,788 | INFO     | ..............................
[2026-02-26 20:19:18] 2026-02-26 19:16:07,788 | INFO     | . Timing measurements:
[2026-02-26 20:19:18] 2026-02-26 19:16:07,788 | INFO     | . get job = 0 s
[2026-02-26 20:19:18] 2026-02-26 19:16:07,788 | INFO     | . initial setup = 8 s
[2026-02-26 20:19:18] 2026-02-26 19:16:07,788 | INFO     | . payload setup = 9 s
[2026-02-26 20:19:18] 2026-02-26 19:16:07,788 | INFO     | . stage-in = 0 s
[2026-02-26 20:19:18] 2026-02-26 19:16:07,788 | INFO     | . payload execution = 12236 s
[2026-02-26 20:19:18] 2026-02-26 19:16:07,788 | INFO     | . stage-out = 1 s
[2026-02-26 20:19:18] 2026-02-26 19:16:07,788 | INFO     | . log creation = 0 s
[2026-02-26 20:19:18] 2026-02-26 19:16:07,788 | INFO     | ..............................
[2026-02-26 20:19:18] 2026-02-26 19:16:07,881 | INFO     | 
[2026-02-26 20:19:18] 2026-02-26 19:16:07,882 | INFO     | job summary report
[2026-02-26 20:19:18] 2026-02-26 19:16:07,882 | INFO     | --------------------------------------------------
[2026-02-26 20:19:18] 2026-02-26 19:16:07,882 | INFO     | PanDA job id: 7030349119
[2026-02-26 20:19:18] 2026-02-26 19:16:07,882 | INFO     | task id: 48838492
[2026-02-26 20:19:18] 2026-02-26 19:16:07,882 | INFO     | errors: (none)
[2026-02-26 20:19:18] 2026-02-26 19:16:07,882 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 20:19:18] 2026-02-26 19:16:07,882 | INFO     | pilot state: finished 
[2026-02-26 20:19:18] 2026-02-26 19:16:07,882 | INFO     | transexitcode: 0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,883 | INFO     | exeerrorcode: 0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,883 | INFO     | exeerrordiag: 
[2026-02-26 20:19:18] 2026-02-26 19:16:07,883 | INFO     | exitcode: 0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,883 | INFO     | exitmsg: OK
[2026-02-26 20:19:18] 2026-02-26 19:16:07,883 | INFO     | cpuconsumptiontime: 46677 s
[2026-02-26 20:19:18] 2026-02-26 19:16:07,883 | INFO     | nevents: 400
[2026-02-26 20:19:18] 2026-02-26 19:16:07,883 | INFO     | neventsw: 0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,883 | INFO     | pid: 1961114
[2026-02-26 20:19:18] 2026-02-26 19:16:07,883 | INFO     | pgrp: 1961114
[2026-02-26 20:19:18] 2026-02-26 19:16:07,883 | INFO     | corecount: 4
[2026-02-26 20:19:18] 2026-02-26 19:16:07,883 | INFO     | event service: False
[2026-02-26 20:19:18] 2026-02-26 19:16:07,884 | INFO     | sizes: {0: 2282006, 1: 2282268, 11: 2282296, 12249: 2312519, 12251: 2321539, 12253: 2321917}
[2026-02-26 20:19:18] 2026-02-26 19:16:07,884 | INFO     | --------------------------------------------------
[2026-02-26 20:19:18] 2026-02-26 19:16:07,884 | INFO     | 
[2026-02-26 20:19:18] 2026-02-26 19:16:07,884 | INFO     | executing command: ls -lF /scratch/boinc/var/slot88/slots/0
[2026-02-26 20:19:18] 2026-02-26 19:16:07,916 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,917 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,917 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,917 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,917 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,917 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,917 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,917 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,918 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,918 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,918 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,918 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,918 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,918 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,918 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,918 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,918 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,918 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 20:19:18] 2026-02-26 19:16:07,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,919 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 20:19:18] 2026-02-26 19:16:07,919 | INFO     | job 7030349119 has completed (purged errors)
[2026-02-26 20:19:18] 2026-02-26 19:16:07,919 | INFO     | overall cleanup function is called
[2026-02-26 20:19:18] 2026-02-26 19:16:08,243 | WARNING  | process 1961114 can no longer be monitored (due to stat problems) - aborting
[2026-02-26 20:19:18] 2026-02-26 19:16:08,807 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 20:19:18] 2026-02-26 19:16:08,808 | INFO     | using path: /scratch/boinc/var/slot88/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 20:19:18] 2026-02-26 19:16:08,808 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-26 20:19:18] 2026-02-26 19:16:08,808 | WARNING  | maxPSS not found in memory monitor output
[2026-02-26 20:19:18] 2026-02-26 19:16:08,809 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7030349119/payload.stdout) since it has not been created yet
[2026-02-26 20:19:18] 2026-02-26 19:16:08,809 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2026-02-26 20:19:18] 2026-02-26 19:16:08,831 | INFO     | sufficient remaining disk space (3314609553408 B)
[2026-02-26 20:19:18] 2026-02-26 19:16:08,831 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-26 20:19:18] 2026-02-26 19:16:08,831 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot88/slots/0/PanDA_Pilot-7030349119/HITS.48838492._000874.pool.root.1 since it does not exist
[2026-02-26 20:19:18] 2026-02-26 19:16:08,931 | INFO     | --- collectZombieJob: --- 10, [1961114]
[2026-02-26 20:19:18] 2026-02-26 19:16:08,931 | INFO     | zombie collector waiting for pid 1961114
[2026-02-26 20:19:18] 2026-02-26 19:16:08,932 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 20:19:18] 2026-02-26 19:16:08,932 | INFO     | collected zombie processes
[2026-02-26 20:19:18] 2026-02-26 19:16:08,932 | INFO     | will attempt to kill all subprocesses of pid=1961114
[2026-02-26 20:19:18] 2026-02-26 19:16:10,511 | INFO     | number of running child processes to parent process 1961114: 1
[2026-02-26 20:19:18] 2026-02-26 19:16:10,511 | INFO     | maximum number of monitored processes: 6
[2026-02-26 20:19:18] 2026-02-26 19:16:10,511 | INFO     | aborting job monitoring since job object (job id=7030349119) has expired
[2026-02-26 20:19:18] 2026-02-26 19:16:10,605 | INFO     | process IDs to be killed: [1961114] (in reverse order)
[2026-02-26 20:19:18] 2026-02-26 19:16:10,874 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 20:19:18] 2026-02-26 19:16:10,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 20:19:18] 2026-02-26 19:16:10,900 | INFO     | did not find any defunct processes belonging to 1961114
[2026-02-26 20:19:18] 2026-02-26 19:16:10,923 | INFO     | did not find any defunct processes belonging to 1961114
[2026-02-26 20:19:18] 2026-02-26 19:16:10,924 | INFO     | ready for new job
[2026-02-26 20:19:18] 2026-02-26 19:16:10,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 20:19:18] 2026-02-26 19:16:10,926 | INFO     | **************************************
[2026-02-26 20:19:18] 2026-02-26 19:16:10,926 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 20:19:18] 2026-02-26 19:16:10,926 | INFO     | **************************************
[2026-02-26 20:19:18] 2026-02-26 19:16:10,927 | INFO     | 
[2026-02-26 20:19:18] 2026-02-26 19:16:10,935 | INFO     | architecture information:
[2026-02-26 20:19:18] 2026-02-26 19:16:10,935 | INFO     | executing command: cat /etc/os-release
[2026-02-26 20:19:18] 2026-02-26 19:16:10,957 | INFO     | cat /etc/os-release:
[2026-02-26 20:19:18] NAME="CentOS Linux"
[2026-02-26 20:19:18] VERSION="7 (Core)"
[2026-02-26 20:19:18] ID="centos"
[2026-02-26 20:19:18] ID_LIKE="rhel fedora"
[2026-02-26 20:19:18] VERSION_ID="7"
[2026-02-26 20:19:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 20:19:18] ANSI_COLOR="0;31"
[2026-02-26 20:19:18] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 20:19:18] HOME_URL="https://www.centos.org/"
[2026-02-26 20:19:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 20:19:18] 
[2026-02-26 20:19:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 20:19:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 20:19:18] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 20:19:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 20:19:18] 
[2026-02-26 20:19:18] 2026-02-26 19:16:10,957 | INFO     | **************************************
[2026-02-26 20:19:18] 2026-02-26 19:16:11,460 | INFO     | executing command: df -mP /scratch/boinc/var/slot88/slots/0
[2026-02-26 20:19:18] 2026-02-26 19:16:11,486 | INFO     | sufficient remaining disk space (3314605359104 B)
[2026-02-26 20:19:18] 2026-02-26 19:16:11,487 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 20:19:18] 2026-02-26 19:16:11,489 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 20:19:18] 2026-02-26 19:16:11,489 | INFO     | update_server=False
[2026-02-26 20:19:18] 2026-02-26 19:16:11,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 20:19:18] 2026-02-26 19:16:11,490 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 20:19:18] 2026-02-26 19:16:11,490 | INFO     | will abort loop
[2026-02-26 20:19:18] 2026-02-26 19:16:11,546 | INFO     | all payload control threads have been joined
[2026-02-26 20:19:18] 2026-02-26 19:16:11,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 20:19:18] 2026-02-26 19:16:11,951 | INFO     | all job control threads have been joined
[2026-02-26 20:19:18] 2026-02-26 19:16:12,245 | INFO     | all data control threads have been joined
[2026-02-26 20:19:18] 2026-02-26 19:16:12,495 | INFO     | [job] retrieve thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:12,496 | INFO     | [job] job monitor thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:12,505 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:12,551 | INFO     | [payload] control thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:12,698 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:12,893 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 20:19:18] 2026-02-26 19:16:12,956 | INFO     | [job] control thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:13,047 | INFO     | [data] copytool_in thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:13,250 | INFO     | [data] control thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:13,307 | INFO     | [payload] validate_post thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:13,434 | INFO     | [job] validate thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:13,568 | INFO     | [data] copytool_out thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:13,675 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:13,738 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 20:19:18] 2026-02-26 19:16:13,806 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:13,898 | INFO     | [job] queue monitor thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:14,009 | INFO     | [payload] failed_post thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:17,744 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 20:19:18] 2026-02-26 19:16:41,276 | INFO     | PID=1946103 has CPU usage=15.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-26 20:19:18] 2026-02-26 19:16:41,276 | INFO     | .. there are 19 such processes running
[2026-02-26 20:19:18] 2026-02-26 19:16:41,277 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 20:19:18] 2026-02-26 19:16:41,277 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 20:19:18] 2026-02-26 19:16:41,277 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 20:19:18] 2026-02-26 19:17:03,425 | INFO     | [monitor] cgroup control has ended
[2026-02-26 20:19:18] 2026-02-26 19:17:04,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22781682390848)>', '<ExcThread(monitor, started 22781378950912)>']
[2026-02-26 20:19:18] 2026-02-26 19:17:05,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 20:19:18] 2026-02-26 19:17:05,400 | INFO     | [monitor] control thread has ended
[2026-02-26 20:19:18] 2026-02-26 19:17:09,455 | INFO     | all workflow threads have been joined
[2026-02-26 20:19:18] 2026-02-26 19:17:09,455 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 20:19:18] 2026-02-26 19:17:09,455 | INFO     | traces error code: 0
[2026-02-26 20:19:18] 2026-02-26 19:17:09,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 20:19:18] 2026-02-26 19:17:09,602 [wrapper] ==== pilot stdout END ====
[2026-02-26 20:19:18] 2026-02-26 19:17:09,606 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 20:19:18] 2026-02-26 19:17:09,610 [wrapper] pilotpid: 1946103
[2026-02-26 20:19:18] 2026-02-26 19:17:09,613 [wrapper] Pilot exit status: 0
[2026-02-26 20:19:18] 2026-02-26 19:17:09,626 [wrapper] pandaids: 7030349119
[2026-02-26 20:19:18] 2026-02-26 19:17:09,817 [wrapper] cleanup supervisor_pilot 2293012 1946104
[2026-02-26 20:19:18] 2026-02-26 19:17:09,820 [wrapper] Test setup, not cleaning
[2026-02-26 20:19:18] 2026-02-26 19:17:09,824 [wrapper] apfmon messages muted
[2026-02-26 20:19:18] 2026-02-26 19:17:09,828 [wrapper] ==== wrapper stdout END ====
[2026-02-26 20:19:18] 2026-02-26 19:17:09,831 [wrapper] ==== wrapper stderr END ====
[2026-02-26 20:19:18]  *** Error codes and diagnostics ***
[2026-02-26 20:19:18]     "exeErrorCode": 0,
[2026-02-26 20:19:18]     "exeErrorDiag": "",
[2026-02-26 20:19:18]     "pilotErrorCode": 0,
[2026-02-26 20:19:18]     "pilotErrorDiag": "",
[2026-02-26 20:19:18]  *** Listing of results directory ***
[2026-02-26 20:19:18] total 508832
[2026-02-26 20:19:18] -rwx------ 1 boinc boinc     36322 Feb 25 21:35 runpilot2-wrapper.sh
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc      5111 Feb 25 21:36 queuedata.json
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc    584627 Feb 25 21:36 pilot3.tar.gz
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc       100 Feb 26 16:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 20:19:18] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 16:51 run_atlas
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc       105 Feb 26 16:51 job.xml
[2026-02-26 20:19:18] -rw-r--r-- 2 boinc boinc 286857279 Feb 26 16:51 EVNT.48220165._000035.pool.root.1
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc      6696 Feb 26 16:51 init_data.xml
[2026-02-26 20:19:18] -rw-r--r-- 2 boinc boinc     15845 Feb 26 16:51 start_atlas.sh
[2026-02-26 20:19:18] drwxrwx--x 2 boinc boinc      4096 Feb 26 16:51 shared
[2026-02-26 20:19:18] -rw-r--r-- 2 boinc boinc    597953 Feb 26 16:51 input.tar.gz
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc         0 Feb 26 16:51 boinc_lockfile
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc      2552 Feb 26 16:51 pandaJob.out
[2026-02-26 20:19:18] -rw------- 1 boinc boinc    998423 Feb 26 16:51 agis_schedconf.cvmfs.json
[2026-02-26 20:19:18] -rw------- 1 boinc boinc       439 Feb 26 16:51 workernode_map.json
[2026-02-26 20:19:18] drwx------ 5 boinc boinc      4096 Feb 26 16:51 pilot3
[2026-02-26 20:19:18] -rw------- 1 boinc boinc 226066842 Feb 26 20:15 HITS.48838492._000874.pool.root.1
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc       529 Feb 26 20:15 boinc_task_state.xml
[2026-02-26 20:19:18] -rw------- 1 boinc boinc      1025 Feb 26 20:16 memory_monitor_summary.json
[2026-02-26 20:19:18] -rw------- 1 boinc boinc        95 Feb 26 20:16 pilot_heartbeat.json
[2026-02-26 20:19:18] -rw------- 1 boinc boinc   1513015 Feb 26 20:16 agis_ddmendpoints.agis.ALL.json
[2026-02-26 20:19:18] -rw------- 1 boinc boinc    387203 Feb 26 20:16 log.48838492._000874.job.log.tgz.1
[2026-02-26 20:19:18] -rw------- 1 boinc boinc      6343 Feb 26 20:16 heartbeat.json
[2026-02-26 20:19:18] -rw------- 1 boinc boinc      4834 Feb 26 20:17 pilotlog.txt
[2026-02-26 20:19:18] -rw------- 1 boinc boinc   1708220 Feb 26 20:17 log.48838492._000874.job.log.1
[2026-02-26 20:19:18] -rw------- 1 boinc boinc       357 Feb 26 20:17 output.list
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc       620 Feb 26 20:17 runtime_log
[2026-02-26 20:19:18] -rw------- 1 boinc boinc   2109440 Feb 26 20:17 result.tar.gz
[2026-02-26 20:19:18] -rw------- 1 boinc boinc       666 Feb 26 20:17 v7XLDmdmaF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmbSzKDmmYnq6m.diag
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc      9205 Feb 26 20:17 runtime_log.err
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc        26 Feb 26 20:18 wrapper_checkpoint.txt
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc      8192 Feb 26 20:19 boinc_mmap_file
[2026-02-26 20:19:18] -rw-r--r-- 1 boinc boinc     21254 Feb 26 20:19 stderr.txt
[2026-02-26 20:19:18] HITS file was successfully produced:
[2026-02-26 20:19:18] -rw------- 1 boinc boinc 226066842 Feb 26 20:15 shared/HITS.pool.root.1
[2026-02-26 20:19:18]  *** Contents of shared directory: ***
[2026-02-26 20:19:18] total 503576
[2026-02-26 20:19:18] -rw-r--r-- 2 boinc boinc 286857279 Feb 26 16:51 ATLAS.root_0
[2026-02-26 20:19:18] -rw-r--r-- 2 boinc boinc     15845 Feb 26 16:51 start_atlas.sh
[2026-02-26 20:19:18] -rw-r--r-- 2 boinc boinc    597953 Feb 26 16:51 input.tar.gz
[2026-02-26 20:19:18] -rw------- 1 boinc boinc 226066842 Feb 26 20:15 HITS.pool.root.1
[2026-02-26 20:19:18] -rw------- 1 boinc boinc   2109440 Feb 26 20:17 result.tar.gz
20:19:20 (1933825): run_atlas exited; CPU time 47436.427857
20:19:20 (1933825): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN