Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:53:46 (210409): wrapper (7.7.26015): starting
08:53:46 (210409): wrapper: running run_atlas (--nthreads 12)
[2026-02-26 08:53:46] Arguments: --nthreads 12
[2026-02-26 08:53:46] Threads: 12
[2026-02-26 08:53:46] Checking for CVMFS
[2026-02-26 08:53:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 08:53:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 08:53:47] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 08:53:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 08:53:48] 2.13.3.0 5451 602 48396 156647 0 50 3632351 4096000 0 130560 0 319487 99.980 24879 252 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-26 08:53:48] CVMFS is ok
[2026-02-26 08:53:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 08:53:48] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-26 08:53:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-26 08:53:48] Further information can be found at the LHC@home message board.
[2026-02-26 08:53:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 08:53:48] Checking for apptainer binary...
[2026-02-26 08:53:48] apptainer is not installed, using version from CVMFS
[2026-02-26 08:53:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 08:53:48] ws24
[2026-02-26 08:53:48] apptainer works
[2026-02-26 08:53:48] Set ATHENA_PROC_NUMBER=12
[2026-02-26 08:53:48] Set ATHENA_CORE_NUMBER=12
[2026-02-26 08:53:48] Starting ATLAS job with PandaID=7030304769
[2026-02-26 08:53:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 10:06:40]  *** The last 200 lines of the pilot log: ***
[2026-02-26 10:06:40]  filetype=log
[2026-02-26 10:06:40]  guid=f5fa925d-e1e5-4121-b694-860bb5aa5bdd
[2026-02-26 10:06:40]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-26 10:06:40]  is_altstaged=None
[2026-02-26 10:06:40]  is_tar=False
[2026-02-26 10:06:40]  lfn=log.48838462._000714.job.log.tgz.1
[2026-02-26 10:06:40]  mtime=0
[2026-02-26 10:06:40]  protocol_id=None
[2026-02-26 10:06:40]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-26 10:06:40]  replicas=None
[2026-02-26 10:06:40]  scope=mc23_13p6TeV
[2026-02-26 10:06:40]  status=None
[2026-02-26 10:06:40]  status_code=0
[2026-02-26 10:06:40]  storage_token=
[2026-02-26 10:06:40]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-7030304769/log.48838462._000714.job.log.tgz.1
[2026-02-26 10:06:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/40/log.48838462._000714.job.log.tgz.1
[2026-02-26 10:06:40]  workdir=None
[2026-02-26 10:06:40] ]
[2026-02-26 10:06:40] 2026-02-26 09:06:05,097 | INFO     | transferring file log.48838462._000714.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-7030304769/log.48838462._000714.job.log.tgz.1 to /var/lib/boinc
[2026-02-26 10:06:40] 2026-02-26 09:06:05,097 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-7030304769/log.48838462._000714.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.488384
[2026-02-26 10:06:40] 2026-02-26 09:06:05,115 | INFO     | adding to output.list: log.48838462._000714.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/aa/40/log.48838462._000714.job.log.tg
[2026-02-26 10:06:40] 2026-02-26 09:06:05,115 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-26 10:06:40] 2026-02-26 09:06:05,115 | INFO     | summary of transferred files:
[2026-02-26 10:06:40] 2026-02-26 09:06:05,115 | INFO     |  -- lfn=log.48838462._000714.job.log.tgz.1, status_code=0, status=transferred
[2026-02-26 10:06:40] 2026-02-26 09:06:05,116 | INFO     | stage-out finished correctly
[2026-02-26 10:06:40] 2026-02-26 09:06:05,255 | INFO     | time since job start (4309s) is within the limit (349056.0s)
[2026-02-26 10:06:40] 2026-02-26 09:06:07,261 | INFO     | time since job start (4311s) is within the limit (349056.0s)
[2026-02-26 10:06:40] 2026-02-26 09:06:07,610 | WARNING  | process 219032 can no longer be monitored (due to stat problems) - aborting
[2026-02-26 10:06:40] 2026-02-26 09:06:07,610 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7030304769/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 10:06:40] 2026-02-26 09:06:07,710 | INFO     | number of running child processes to parent process 219032: 1
[2026-02-26 10:06:40] 2026-02-26 09:06:07,710 | INFO     | maximum number of monitored processes: 6
[2026-02-26 10:06:40] 2026-02-26 09:06:08,305 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-26 10:06:40] 2026-02-26 09:06:08,808 | INFO     | job 7030304769 has state=finished
[2026-02-26 10:06:40] 2026-02-26 09:06:08,808 | INFO     | preparing for final server update for job 7030304769 in state='finished'
[2026-02-26 10:06:40] 2026-02-26 09:06:08,809 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-7030304769/jobReport.json
[2026-02-26 10:06:40] 2026-02-26 09:06:08,810 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-02-26 10:06:40] 2026-02-26 09:06:08,810 | INFO     | this job has now completed (state=finished)
[2026-02-26 10:06:40] 2026-02-26 09:06:08,810 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-26 10:06:40] 2026-02-26 09:06:08,811 | INFO     | log transfer has been attempted: DONE
[2026-02-26 10:06:40] 2026-02-26 09:06:08,811 | INFO     | job 7030304769 has finished - writing final server update
[2026-02-26 10:06:40] 2026-02-26 09:06:08,811 | INFO     | total number of processed events: 400 (read)
[2026-02-26 10:06:40] 2026-02-26 09:06:08,814 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-7030304769/memory_monitor_summary.json (trf name=prmon)
[2026-02-26 10:06:40] 2026-02-26 09:06:08,814 | INFO     | extracted standard info from prmon json
[2026-02-26 10:06:40] 2026-02-26 09:06:08,814 | INFO     | extracted standard memory fields from prmon json
[2026-02-26 10:06:40] 2026-02-26 09:06:08,814 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-26 10:06:40] 2026-02-26 09:06:08,814 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-26 10:06:40] 2026-02-26 09:06:08,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-26 10:06:40] 2026-02-26 09:06:08,816 | INFO     | fitting pss+swap vs Time
[2026-02-26 10:06:40] 2026-02-26 09:06:08,816 | INFO     | sum of square deviations: 81266640.0
[2026-02-26 10:06:40] 2026-02-26 09:06:08,816 | INFO     | sum of deviations: -8184179741.0
[2026-02-26 10:06:40] 2026-02-26 09:06:08,816 | INFO     | mean x: 1772094702.5
[2026-02-26 10:06:40] 2026-02-26 09:06:08,816 | INFO     | mean y: 2842452.53125
[2026-02-26 10:06:40] 2026-02-26 09:06:08,816 | INFO     | intersect: 178466496952.50714
[2026-02-26 10:06:40] 2026-02-26 09:06:08,817 | INFO     | chi2: 0.1154654086051725
[2026-02-26 10:06:40] 2026-02-26 09:06:08,817 | INFO     | current memory leak: -100.71 B/s (using 64 data points, chi2=0.12)
[2026-02-26 10:06:40] 2026-02-26 09:06:08,817 | INFO     | could have reported an average CPU frequency of 2669 MHz (6 samples)
[2026-02-26 10:06:40] 2026-02-26 09:06:08,817 | INFO     | ..............................
[2026-02-26 10:06:40] 2026-02-26 09:06:08,817 | INFO     | . Timing measurements:
[2026-02-26 10:06:40] 2026-02-26 09:06:08,817 | INFO     | . get job = 0 s
[2026-02-26 10:06:40] 2026-02-26 09:06:08,817 | INFO     | . initial setup = 11 s
[2026-02-26 10:06:40] 2026-02-26 09:06:08,817 | INFO     | . payload setup = 4 s
[2026-02-26 10:06:40] 2026-02-26 09:06:08,817 | INFO     | . stage-in = 0 s
[2026-02-26 10:06:40] 2026-02-26 09:06:08,817 | INFO     | . payload execution = 4288 s
[2026-02-26 10:06:40] 2026-02-26 09:06:08,817 | INFO     | . stage-out = 0 s
[2026-02-26 10:06:40] 2026-02-26 09:06:08,818 | INFO     | . log creation = 0 s
[2026-02-26 10:06:40] 2026-02-26 09:06:08,818 | INFO     | ..............................
[2026-02-26 10:06:40] 2026-02-26 09:06:08,880 | INFO     | 
[2026-02-26 10:06:40] 2026-02-26 09:06:08,880 | INFO     | job summary report
[2026-02-26 10:06:40] 2026-02-26 09:06:08,880 | INFO     | --------------------------------------------------
[2026-02-26 10:06:40] 2026-02-26 09:06:08,880 | INFO     | PanDA job id: 7030304769
[2026-02-26 10:06:40] 2026-02-26 09:06:08,880 | INFO     | task id: 48838462
[2026-02-26 10:06:40] 2026-02-26 09:06:08,880 | INFO     | errors: (none)
[2026-02-26 10:06:40] 2026-02-26 09:06:08,880 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-26 10:06:40] 2026-02-26 09:06:08,880 | INFO     | pilot state: finished 
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | transexitcode: 0
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | exeerrorcode: 0
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | exeerrordiag: 
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | exitcode: 0
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | exitmsg: OK
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | cpuconsumptiontime: 47275 s
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | nevents: 400
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | neventsw: 0
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | pid: 219032
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | pgrp: 219032
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | corecount: 12
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | event service: False
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | sizes: {0: 2281900, 1: 2282304, 11: 2282304, 4297: 2308402, 4298: 2317414, 4301: 2317792}
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | --------------------------------------------------
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | 
[2026-02-26 10:06:40] 2026-02-26 09:06:08,881 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-02-26 10:06:40] 2026-02-26 09:06:08,906 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,906 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,906 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,907 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 10:06:40] 2026-02-26 09:06:08,908 | INFO     | job 7030304769 has completed (purged errors)
[2026-02-26 10:06:40] 2026-02-26 09:06:08,908 | INFO     | overall cleanup function is called
[2026-02-26 10:06:40] 2026-02-26 09:06:09,915 | INFO     | --- collectZombieJob: --- 10, [219032]
[2026-02-26 10:06:40] 2026-02-26 09:06:09,916 | INFO     | zombie collector waiting for pid 219032
[2026-02-26 10:06:40] 2026-02-26 09:06:09,916 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 10:06:40] 2026-02-26 09:06:09,916 | INFO     | collected zombie processes
[2026-02-26 10:06:40] 2026-02-26 09:06:09,916 | INFO     | will attempt to kill all subprocesses of pid=219032
[2026-02-26 10:06:40] 2026-02-26 09:06:10,026 | INFO     | process IDs to be killed: [219032] (in reverse order)
[2026-02-26 10:06:40] 2026-02-26 09:06:10,072 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 10:06:40] 2026-02-26 09:06:10,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 10:06:40] 2026-02-26 09:06:10,076 | INFO     | did not find any defunct processes belonging to 219032
[2026-02-26 10:06:40] 2026-02-26 09:06:10,079 | INFO     | did not find any defunct processes belonging to 219032
[2026-02-26 10:06:40] 2026-02-26 09:06:10,079 | INFO     | ready for new job
[2026-02-26 10:06:40] 2026-02-26 09:06:10,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 10:06:40] 2026-02-26 09:06:10,080 | INFO     | **************************************
[2026-02-26 10:06:40] 2026-02-26 09:06:10,080 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 10:06:40] 2026-02-26 09:06:10,080 | INFO     | **************************************
[2026-02-26 10:06:40] 2026-02-26 09:06:10,080 | INFO     | 
[2026-02-26 10:06:40] 2026-02-26 09:06:10,081 | INFO     | architecture information:
[2026-02-26 10:06:40] 2026-02-26 09:06:10,081 | INFO     | executing command: cat /etc/os-release
[2026-02-26 10:06:40] 2026-02-26 09:06:10,095 | INFO     | cat /etc/os-release:
[2026-02-26 10:06:40] NAME="CentOS Linux"
[2026-02-26 10:06:40] VERSION="7 (Core)"
[2026-02-26 10:06:40] ID="centos"
[2026-02-26 10:06:40] ID_LIKE="rhel fedora"
[2026-02-26 10:06:40] VERSION_ID="7"
[2026-02-26 10:06:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 10:06:40] ANSI_COLOR="0;31"
[2026-02-26 10:06:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 10:06:40] HOME_URL="https://www.centos.org/"
[2026-02-26 10:06:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 10:06:40] 
[2026-02-26 10:06:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 10:06:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 10:06:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 10:06:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 10:06:40] 
[2026-02-26 10:06:40] 2026-02-26 09:06:10,095 | INFO     | **************************************
[2026-02-26 10:06:40] 2026-02-26 09:06:10,598 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-02-26 10:06:40] 2026-02-26 09:06:10,621 | INFO     | sufficient remaining disk space (28335669248 B)
[2026-02-26 10:06:40] 2026-02-26 09:06:10,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 10:06:40] 2026-02-26 09:06:10,622 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 10:06:40] 2026-02-26 09:06:10,622 | INFO     | update_server=False
[2026-02-26 10:06:40] 2026-02-26 09:06:10,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 10:06:40] 2026-02-26 09:06:10,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 10:06:40] 2026-02-26 09:06:10,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 10:06:40] 2026-02-26 09:06:10,692 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 10:06:40] 2026-02-26 09:06:11,195 | INFO     | all job control threads have been joined
[2026-02-26 10:06:40] 2026-02-26 09:06:11,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 10:06:40] 2026-02-26 09:06:11,217 | INFO     | aborting loop
[2026-02-26 10:06:40] 2026-02-26 09:06:11,268 | INFO     | all data control threads have been joined
[2026-02-26 10:06:40] 2026-02-26 09:06:11,627 | INFO     | [job] retrieve thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:11,628 | INFO     | [job] queue monitor thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:11,848 | INFO     | all payload control threads have been joined
[2026-02-26 10:06:40] 2026-02-26 09:06:11,995 | INFO     | [payload] validate_post thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:12,093 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:12,200 | INFO     | [job] control thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:12,222 | INFO     | [job] job monitor thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:12,273 | INFO     | [data] control thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:12,309 | INFO     | [job] validate thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:12,497 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:12,638 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:12,698 | INFO     | [data] copytool_out thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:12,853 | INFO     | [payload] control thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:12,863 | INFO     | [data] copytool_in thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:12,898 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:13,007 | INFO     | [payload] failed_post thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:14,627 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 10:06:40] 2026-02-26 09:06:23,020 | INFO     | [monitor] cgroup control has ended
[2026-02-26 10:06:40] 2026-02-26 09:06:24,836 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131600408037184)>', '<ExcThread(monitor, started 131599718926080)>']
[2026-02-26 10:06:40] 2026-02-26 09:06:29,841 | INFO     | all workflow threads have been joined
[2026-02-26 10:06:40] 2026-02-26 09:06:29,842 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 10:06:40] 2026-02-26 09:06:29,842 | INFO     | traces error code: 0
[2026-02-26 10:06:40] 2026-02-26 09:06:29,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 10:06:40] 2026-02-26 09:06:40,484 | INFO     | PID=214519 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-26 10:06:40] 2026-02-26 09:06:40,484 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 10:06:40] 2026-02-26 09:06:40,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 10:06:40] 2026-02-26 09:06:40,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 10:06:40] 2026-02-26 09:06:40,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 10:06:40] 2026-02-26 09:06:40,485 | INFO     | [monitor] control thread has ended
[2026-02-26 10:06:40] 2026-02-26 09:06:40,561 [wrapper] ==== pilot stdout END ====
[2026-02-26 10:06:40] 2026-02-26 09:06:40,564 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 10:06:40] 2026-02-26 09:06:40,567 [wrapper] pilotpid: 214519
[2026-02-26 10:06:40] 2026-02-26 09:06:40,570 [wrapper] Pilot exit status: 0
[2026-02-26 10:06:40] 2026-02-26 09:06:40,581 [wrapper] pandaids: 7030304769
[2026-02-26 10:06:40] 2026-02-26 09:06:40,613 [wrapper] cleanup supervisor_pilot  224601 214520
[2026-02-26 10:06:40] 2026-02-26 09:06:40,618 [wrapper] Test setup, not cleaning
[2026-02-26 10:06:40] 2026-02-26 09:06:40,622 [wrapper] apfmon messages muted
[2026-02-26 10:06:40] 2026-02-26 09:06:40,626 [wrapper] ==== wrapper stdout END ====
[2026-02-26 10:06:40] 2026-02-26 09:06:40,629 [wrapper] ==== wrapper stderr END ====
[2026-02-26 10:06:40]  *** Error codes and diagnostics ***
[2026-02-26 10:06:40]     "exeErrorCode": 0,
[2026-02-26 10:06:40]     "exeErrorDiag": "",
[2026-02-26 10:06:40]     "pilotErrorCode": 0,
[2026-02-26 10:06:40]     "pilotErrorDiag": "",
[2026-02-26 10:06:40]  *** Listing of results directory ***
[2026-02-26 10:06:40] total 483468
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc    584627 Feb 25 16:36 pilot3.tar.gz
[2026-02-26 10:06:40] -rwx------ 1 boinc boinc     36322 Feb 25 16:38 runpilot2-wrapper.sh
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc      5111 Feb 25 16:38 queuedata.json
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc       100 Feb 26 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 10:06:40] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 08:53 run_atlas
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc       105 Feb 26 08:53 job.xml
[2026-02-26 10:06:40] -rw-r--r-- 2 boinc boinc 274456798 Feb 26 08:53 EVNT.48220133._000029.pool.root.1
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc      9523 Feb 26 08:53 init_data.xml
[2026-02-26 10:06:40] drwxrwx--x 2 boinc boinc      4096 Feb 26 08:53 shared
[2026-02-26 10:06:40] -rw-r--r-- 2 boinc boinc    597942 Feb 26 08:53 input.tar.gz
[2026-02-26 10:06:40] -rw-r--r-- 2 boinc boinc     15845 Feb 26 08:53 start_atlas.sh
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc         0 Feb 26 08:53 boinc_lockfile
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc      2560 Feb 26 08:53 pandaJob.out
[2026-02-26 10:06:40] -rw------- 1 boinc boinc    997632 Feb 26 08:54 agis_schedconf.cvmfs.json
[2026-02-26 10:06:40] -rw------- 1 boinc boinc   1513015 Feb 26 08:54 agis_ddmendpoints.agis.ALL.json
[2026-02-26 10:06:40] -rw------- 1 boinc boinc       411 Feb 26 08:54 workernode_map.json
[2026-02-26 10:06:40] drwx------ 5 boinc boinc      4096 Feb 26 08:54 pilot3
[2026-02-26 10:06:40] -rw------- 1 boinc boinc 214650610 Feb 26 10:05 HITS.48838462._000714.pool.root.1
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc       529 Feb 26 10:05 boinc_task_state.xml
[2026-02-26 10:06:40] -rw------- 1 boinc boinc      1013 Feb 26 10:06 memory_monitor_summary.json
[2026-02-26 10:06:40] -rw------- 1 boinc boinc        95 Feb 26 10:06 pilot_heartbeat.json
[2026-02-26 10:06:40] -rw------- 1 boinc boinc    384253 Feb 26 10:06 log.48838462._000714.job.log.tgz.1
[2026-02-26 10:06:40] -rw------- 1 boinc boinc      6263 Feb 26 10:06 heartbeat.json
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc        27 Feb 26 10:06 wrapper_checkpoint.txt
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc      8192 Feb 26 10:06 boinc_mmap_file
[2026-02-26 10:06:40] -rw------- 1 boinc boinc       746 Feb 26 10:06 pilotlog.txt
[2026-02-26 10:06:40] -rw------- 1 boinc boinc    634103 Feb 26 10:06 log.48838462._000714.job.log.1
[2026-02-26 10:06:40] -rw------- 1 boinc boinc       357 Feb 26 10:06 output.list
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc       620 Feb 26 10:06 runtime_log
[2026-02-26 10:06:40] -rw------- 1 boinc boinc   1034240 Feb 26 10:06 result.tar.gz
[2026-02-26 10:06:40] -rw------- 1 boinc boinc       637 Feb 26 10:06 SLsLDm38VF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmYryKDmTCTuUo.diag
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc      8857 Feb 26 10:06 runtime_log.err
[2026-02-26 10:06:40] -rw-r--r-- 1 boinc boinc     21432 Feb 26 10:06 stderr.txt
[2026-02-26 10:06:40] HITS file was successfully produced:
[2026-02-26 10:06:40] -rw------- 1 boinc boinc 214650610 Feb 26 10:05 shared/HITS.pool.root.1
[2026-02-26 10:06:40]  *** Contents of shared directory: ***
[2026-02-26 10:06:40] total 479268
[2026-02-26 10:06:40] -rw-r--r-- 2 boinc boinc 274456798 Feb 26 08:53 ATLAS.root_0
[2026-02-26 10:06:40] -rw-r--r-- 2 boinc boinc    597942 Feb 26 08:53 input.tar.gz
[2026-02-26 10:06:40] -rw-r--r-- 2 boinc boinc     15845 Feb 26 08:53 start_atlas.sh
[2026-02-26 10:06:40] -rw------- 1 boinc boinc 214650610 Feb 26 10:05 HITS.pool.root.1
[2026-02-26 10:06:40] -rw------- 1 boinc boinc   1034240 Feb 26 10:06 result.tar.gz
10:06:42 (210409): run_atlas exited; CPU time 47320.530035
10:06:42 (210409): called boinc_finish(0)

</stderr_txt>
]]>

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