Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
00:45:05 (89966): wrapper (7.7.26015): starting
00:45:05 (89966): wrapper: running run_atlas (--nthreads 3)
[2026-02-26 00:45:05] Arguments: --nthreads 3
[2026-02-26 00:45:05] Threads: 3
[2026-02-26 00:45:05] Checking for CVMFS
[2026-02-26 00:45:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 00:45:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 00:45:06] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 00:45:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 00:45:06] 2.9.2.0 18499 485 66812 156635 3 49 24118186 36864001 0 130560 0 200806 99.973 28230 5693 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-26 00:45:06] CVMFS is ok
[2026-02-26 00:45:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 00:45:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 00:45:06] Further information can be found at the LHC@home message board.
[2026-02-26 00:45:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 00:45:06] Checking for apptainer binary...
[2026-02-26 00:45:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 00:45:06] Running /usr/bin/apptainer --version
[2026-02-26 00:45:06] apptainer version 1.4.1-1.1
[2026-02-26 00:45:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 00:45:06] legendA257a
[2026-02-26 00:45:06] apptainer works
[2026-02-26 00:45:07] Set ATHENA_PROC_NUMBER=3
[2026-02-26 00:45:07] Set ATHENA_CORE_NUMBER=3
[2026-02-26 00:45:07] Starting ATLAS job with PandaID=7030276241
[2026-02-26 00:45:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 02:27:35]  *** The last 200 lines of the pilot log: ***
[2026-02-26 02:27:35] 2026-02-26 01:27:04,014 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-26 02:27:35] 2026-02-26 01:27:04,014 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-26 02:27:35] 2026-02-26 01:27:04,014 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-26 02:27:35] 2026-02-26 01:27:04,014 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-26 02:27:35] 2026-02-26 01:27:04,014 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-26 02:27:35] 2026-02-26 01:27:04,014 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-26 02:27:35] 2026-02-26 01:27:04,014 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-26 02:27:35] 2026-02-26 01:27:04,015 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-26 02:27:35] 2026-02-26 01:27:04,015 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-26 02:27:35] 2026-02-26 01:27:04,015 | INFO     | job 7030276241 has completed (purged errors)
[2026-02-26 02:27:35] 2026-02-26 01:27:04,015 | INFO     | overall cleanup function is called
[2026-02-26 02:27:35] 2026-02-26 01:27:05,021 | INFO     | --- collectZombieJob: --- 10, [98429]
[2026-02-26 02:27:35] 2026-02-26 01:27:05,021 | INFO     | zombie collector waiting for pid 98429
[2026-02-26 02:27:35] 2026-02-26 01:27:05,022 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-26 02:27:35] 2026-02-26 01:27:05,022 | INFO     | collected zombie processes
[2026-02-26 02:27:35] 2026-02-26 01:27:05,022 | INFO     | will attempt to kill all subprocesses of pid=98429
[2026-02-26 02:27:35] 2026-02-26 01:27:05,062 | INFO     | process IDs to be killed: [98429] (in reverse order)
[2026-02-26 02:27:35] 2026-02-26 01:27:05,088 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 02:27:35] 2026-02-26 01:27:05,088 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 02:27:35] 2026-02-26 01:27:05,089 | INFO     | did not find any defunct processes belonging to 98429
[2026-02-26 02:27:35] 2026-02-26 01:27:05,090 | INFO     | did not find any defunct processes belonging to 98429
[2026-02-26 02:27:35] 2026-02-26 01:27:05,090 | INFO     | ready for new job
[2026-02-26 02:27:35] 2026-02-26 01:27:05,090 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 02:27:35] 2026-02-26 01:27:05,091 | INFO     | **************************************
[2026-02-26 02:27:35] 2026-02-26 01:27:05,091 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 02:27:35] 2026-02-26 01:27:05,091 | INFO     | **************************************
[2026-02-26 02:27:35] 2026-02-26 01:27:05,091 | INFO     | 
[2026-02-26 02:27:35] 2026-02-26 01:27:05,091 | INFO     | architecture information:
[2026-02-26 02:27:35] 2026-02-26 01:27:05,092 | INFO     | executing command: cat /etc/os-release
[2026-02-26 02:27:35] 2026-02-26 01:27:05,101 | INFO     | cat /etc/os-release:
[2026-02-26 02:27:35] NAME="CentOS Linux"
[2026-02-26 02:27:35] VERSION="7 (Core)"
[2026-02-26 02:27:35] ID="centos"
[2026-02-26 02:27:35] ID_LIKE="rhel fedora"
[2026-02-26 02:27:35] VERSION_ID="7"
[2026-02-26 02:27:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 02:27:35] ANSI_COLOR="0;31"
[2026-02-26 02:27:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 02:27:35] HOME_URL="https://www.centos.org/"
[2026-02-26 02:27:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 02:27:35] 
[2026-02-26 02:27:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 02:27:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 02:27:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 02:27:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 02:27:35] 
[2026-02-26 02:27:35] 2026-02-26 01:27:05,101 | INFO     | **************************************
[2026-02-26 02:27:35] 2026-02-26 01:27:05,604 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-26 02:27:35] 2026-02-26 01:27:05,618 | INFO     | sufficient remaining disk space (380554444800 B)
[2026-02-26 02:27:35] 2026-02-26 01:27:05,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 02:27:35] 2026-02-26 01:27:05,618 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 02:27:35] 2026-02-26 01:27:05,618 | INFO     | update_server=False
[2026-02-26 02:27:35] 2026-02-26 01:27:05,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 02:27:35] 2026-02-26 01:27:05,618 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 02:27:35] 2026-02-26 01:27:05,854 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-26 02:27:35] 2026-02-26 01:27:05,855 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-26 02:27:35] 2026-02-26 01:27:05,855 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 02:27:35] 2026-02-26 01:27:05,855 | INFO     | will abort loop
[2026-02-26 02:27:35] 2026-02-26 01:27:05,994 | INFO     | all data control threads have been joined
[2026-02-26 02:27:35] 2026-02-26 01:27:06,191 | INFO     | all job control threads have been joined
[2026-02-26 02:27:35] 2026-02-26 01:27:06,217 | INFO     | all payload control threads have been joined
[2026-02-26 02:27:35] 2026-02-26 01:27:06,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 02:27:35] 2026-02-26 01:27:06,624 | INFO     | [job] queue monitor thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:06,624 | INFO     | [job] retrieve thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:06,787 | INFO     | [payload] validate_post thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:06,859 | INFO     | [job] job monitor thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:07,000 | INFO     | [data] control thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:07,041 | INFO     | [job] validate thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:07,041 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:07,115 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:07,197 | INFO     | [job] control thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:07,223 | INFO     | [payload] control thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:07,307 | INFO     | [data] copytool_in thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:07,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 02:27:35] 2026-02-26 01:27:07,761 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:07,832 | INFO     | [payload] failed_post thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:08,298 | INFO     | [data] copytool_out thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:11,370 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:16,595 | INFO     | job.realtimelogging is not enabled
[2026-02-26 02:27:35] 2026-02-26 01:27:17,601 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 02:27:35] 2026-02-26 01:27:24,459 | INFO     | [monitor] cgroup control has ended
[2026-02-26 02:27:35] 2026-02-26 01:27:24,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140023232194368)>', '<ExcThread(monitor, started 140022367905536)>']
[2026-02-26 02:27:35] 2026-02-26 01:27:29,555 | INFO     | all workflow threads have been joined
[2026-02-26 02:27:35] 2026-02-26 01:27:29,556 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 02:27:35] 2026-02-26 01:27:29,556 | INFO     | traces error code: 0
[2026-02-26 02:27:35] 2026-02-26 01:27:29,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 02:27:35] 2026-02-26 01:27:35,760 | INFO     | PID=94005 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-26 02:27:35] 2026-02-26 01:27:35,760 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 02:27:35] 2026-02-26 01:27:35,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 02:27:35] 2026-02-26 01:27:35,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 02:27:35] 2026-02-26 01:27:35,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 02:27:35] 2026-02-26 01:27:35,760 | INFO     | [monitor] control thread has ended
[2026-02-26 02:27:35] 2026-02-26 01:27:35,807 [wrapper] ==== pilot stdout END ====
[2026-02-26 02:27:35] 2026-02-26 01:27:35,810 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 02:27:35] 2026-02-26 01:27:35,812 [wrapper] pilotpid: 94005
[2026-02-26 02:27:35] 2026-02-26 01:27:35,815 [wrapper] Pilot exit status: 0
[2026-02-26 02:27:35] 2026-02-26 01:27:35,823 [wrapper] pandaids: 7030276241
[2026-02-26 02:27:35] 2026-02-26 01:27:35,839 [wrapper] cleanup supervisor_pilot  103663 94006
[2026-02-26 02:27:35] 2026-02-26 01:27:35,842 [wrapper] Test setup, not cleaning
[2026-02-26 02:27:35] 2026-02-26 01:27:35,844 [wrapper] apfmon messages muted
[2026-02-26 02:27:35] 2026-02-26 01:27:35,847 [wrapper] ==== wrapper stdout END ====
[2026-02-26 02:27:35] 2026-02-26 01:27:35,849 [wrapper] ==== wrapper stderr END ====
[2026-02-26 02:27:35]  *** Error codes and diagnostics ***
[2026-02-26 02:27:35]     "exeErrorCode": 0,
[2026-02-26 02:27:35]     "exeErrorDiag": "",
[2026-02-26 02:27:35]     "pilotErrorCode": 0,
[2026-02-26 02:27:35]     "pilotErrorDiag": "",
[2026-02-26 02:27:35]  *** Listing of results directory ***
[2026-02-26 02:27:35] total 510264
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc    584627 Feb 25 14:22 pilot3.tar.gz
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc      5111 Feb 25 14:36 queuedata.json
[2026-02-26 02:27:35] -rwx------ 1 boinc boinc     36322 Feb 25 14:37 runpilot2-wrapper.sh
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc       100 Feb 26 00:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 02:27:35] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 00:45 run_atlas
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc       105 Feb 26 00:45 job.xml
[2026-02-26 02:27:35] -rw-r--r-- 2 boinc boinc 290052691 Feb 26 00:45 EVNT.48220085._000127.pool.root.1
[2026-02-26 02:27:35] -rw-r--r-- 2 boinc boinc    597959 Feb 26 00:45 input.tar.gz
[2026-02-26 02:27:35] -rw-r--r-- 2 boinc boinc     15845 Feb 26 00:45 start_atlas.sh
[2026-02-26 02:27:35] drwxrwx--x 2 boinc boinc      4096 Feb 26 00:45 shared
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc         0 Feb 26 00:45 boinc_setup_complete
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc      6449 Feb 26 00:45 init_data.xml
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc         0 Feb 26 00:45 boinc_lockfile
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc      2568 Feb 26 00:45 pandaJob.out
[2026-02-26 02:27:35] -rw------- 1 boinc boinc    995706 Feb 26 00:45 agis_schedconf.cvmfs.json
[2026-02-26 02:27:35] -rw------- 1 boinc boinc   1513015 Feb 26 00:45 agis_ddmendpoints.agis.ALL.json
[2026-02-26 02:27:35] -rw------- 1 boinc boinc       428 Feb 26 00:45 workernode_map.json
[2026-02-26 02:27:35] drwx------ 5 boinc boinc      4096 Feb 26 00:45 pilot3
[2026-02-26 02:27:35] -rw------- 1 boinc boinc 226244913 Feb 26 02:26 HITS.48838416._003112.pool.root.1
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc       529 Feb 26 02:26 boinc_task_state.xml
[2026-02-26 02:27:35] -rw------- 1 boinc boinc        95 Feb 26 02:26 pilot_heartbeat.json
[2026-02-26 02:27:35] -rw------- 1 boinc boinc      1014 Feb 26 02:26 memory_monitor_summary.json
[2026-02-26 02:27:35] -rw------- 1 boinc boinc    268580 Feb 26 02:26 log.48838416._003112.job.log.tgz.1
[2026-02-26 02:27:35] -rw------- 1 boinc boinc      6311 Feb 26 02:27 heartbeat.json
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc        27 Feb 26 02:27 wrapper_checkpoint.txt
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc      8192 Feb 26 02:27 boinc_mmap_file
[2026-02-26 02:27:35] -rw------- 1 boinc boinc       745 Feb 26 02:27 pilotlog.txt
[2026-02-26 02:27:35] -rw------- 1 boinc boinc    883702 Feb 26 02:27 log.48838416._003112.job.log.1
[2026-02-26 02:27:35] -rw------- 1 boinc boinc       357 Feb 26 02:27 output.list
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc       620 Feb 26 02:27 runtime_log
[2026-02-26 02:27:35] -rw------- 1 boinc boinc   1167360 Feb 26 02:27 result.tar.gz
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc      8921 Feb 26 02:27 runtime_log.err
[2026-02-26 02:27:35] -rw------- 1 boinc boinc       662 Feb 26 02:27 9GuLDmrFUF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmPYyKDmkekOHm.diag
[2026-02-26 02:27:35] -rw-r--r-- 1 boinc boinc     12025 Feb 26 02:27 stderr.txt
[2026-02-26 02:27:35] HITS file was successfully produced:
[2026-02-26 02:27:35] -rw------- 1 boinc boinc 226244913 Feb 26 02:26 shared/HITS.pool.root.1
[2026-02-26 02:27:35]  *** Contents of shared directory: ***
[2026-02-26 02:27:35] total 505948
[2026-02-26 02:27:35] -rw-r--r-- 2 boinc boinc 290052691 Feb 26 00:45 ATLAS.root_0
[2026-02-26 02:27:35] -rw-r--r-- 2 boinc boinc    597959 Feb 26 00:45 input.tar.gz
[2026-02-26 02:27:35] -rw-r--r-- 2 boinc boinc     15845 Feb 26 00:45 start_atlas.sh
[2026-02-26 02:27:35] -rw------- 1 boinc boinc 226244913 Feb 26 02:26 HITS.pool.root.1
[2026-02-26 02:27:35] -rw------- 1 boinc boinc   1167360 Feb 26 02:27 result.tar.gz
02:27:37 (89966): run_atlas exited; CPU time 17602.489768
02:27:37 (89966): called boinc_finish(0)

</stderr_txt>
]]>

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