Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:02:12 (3645444): wrapper (7.7.26015): starting
13:02:12 (3645444): wrapper: running run_atlas (--nthreads 4)
[2026-02-27 13:02:12] Arguments: --nthreads 4
[2026-02-27 13:02:12] Threads: 4
[2026-02-27 13:02:12] Checking for CVMFS
[2026-02-27 13:02:12] No cvmfs_config command found, will try listing directly
[2026-02-27 13:02:12] CVMFS is ok
[2026-02-27 13:02:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-27 13:02:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-27 13:02:12] Further information can be found at the LHC@home message board.
[2026-02-27 13:02:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-27 13:02:12] Checking for apptainer binary...
[2026-02-27 13:02:12] which: no apptainer in ((null))
[2026-02-27 13:02:12] apptainer is not installed, using version from CVMFS
[2026-02-27 13:02:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-27 13:02:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-27 13:02:13] apptainer works
[2026-02-27 13:02:13] Set ATHENA_PROC_NUMBER=4
[2026-02-27 13:02:13] Set ATHENA_CORE_NUMBER=4
[2026-02-27 13:02:13] Starting ATLAS job with PandaID=7030275554
[2026-02-27 13:02:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-27 16:13:01]  *** The last 200 lines of the pilot log: ***
[2026-02-27 16:13:01] 2026-02-27 15:12:21,830 | INFO     | mean y: 2316611.2085561496
[2026-02-27 16:13:01] 2026-02-27 15:12:21,830 | INFO     | intersect: -14574900732.66893
[2026-02-27 16:13:01] 2026-02-27 15:12:21,830 | INFO     | chi2: 2.09736686800685
[2026-02-27 16:13:01] 2026-02-27 15:12:21,831 | INFO     | sum of square deviations: 1869302025.5
[2026-02-27 16:13:01] 2026-02-27 15:12:21,832 | INFO     | sum of deviations: 27463473344.5
[2026-02-27 16:13:01] 2026-02-27 15:12:21,832 | INFO     | mean x: 1772199306.5
[2026-02-27 16:13:01] 2026-02-27 15:12:21,832 | INFO     | mean y: 2326757.2472527474
[2026-02-27 16:13:01] 2026-02-27 15:12:21,832 | INFO     | intersect: -26034529647.584225
[2026-02-27 16:13:01] 2026-02-27 15:12:21,833 | INFO     | chi2: 1.3326955245162613
[2026-02-27 16:13:01] 2026-02-27 15:12:21,833 | INFO     | current chi2=1.3326955245162613 (change=36.45863559469994 %)
[2026-02-27 16:13:01] 2026-02-27 15:12:21,833 | INFO     | sum of square deviations: 1719429448.0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,834 | INFO     | sum of deviations: 26482546771.0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,834 | INFO     | mean x: 1772199154.0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,834 | INFO     | mean y: 2325758.9209039547
[2026-02-27 16:13:01] 2026-02-27 15:12:21,834 | INFO     | intersect: -27292976783.39756
[2026-02-27 16:13:01] 2026-02-27 15:12:21,835 | INFO     | chi2: 1.3334608322502899
[2026-02-27 16:13:01] 2026-02-27 15:12:21,835 | INFO     | current chi2=1.3334608322502899 (change=-0.05742554994370511 %)
[2026-02-27 16:13:01] 2026-02-27 15:12:21,835 | INFO     | right removable region: 176
[2026-02-27 16:13:01] 2026-02-27 15:12:21,835 | INFO     | sum of square deviations: 1869302025.5
[2026-02-27 16:13:01] 2026-02-27 15:12:21,836 | INFO     | sum of deviations: -7934303336.499999
[2026-02-27 16:13:01] 2026-02-27 15:12:21,836 | INFO     | mean x: 1772199611.5
[2026-02-27 16:13:01] 2026-02-27 15:12:21,837 | INFO     | mean y: 2340010.741758242
[2026-02-27 16:13:01] 2026-02-27 15:12:21,837 | INFO     | intersect: 7524489507.534486
[2026-02-27 16:13:01] 2026-02-27 15:12:21,837 | INFO     | chi2: 0.7851412455822873
[2026-02-27 16:13:01] 2026-02-27 15:12:21,837 | INFO     | current chi2=0.7851412455822873 (change=62.565383407223585 %)
[2026-02-27 16:13:01] 2026-02-27 15:12:21,837 | INFO     | sum of square deviations: 1719429448.0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,838 | INFO     | sum of deviations: -7779677700.0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,839 | INFO     | mean x: 1772199764.0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,839 | INFO     | mean y: 2339847.813559322
[2026-02-27 16:13:01] 2026-02-27 15:12:21,839 | INFO     | intersect: 8020780499.724544
[2026-02-27 16:13:01] 2026-02-27 15:12:21,839 | INFO     | chi2: 0.785339970214226
[2026-02-27 16:13:01] 2026-02-27 15:12:21,839 | INFO     | current chi2=0.785339970214226 (change=-0.025310685568598064 %)
[2026-02-27 16:13:01] 2026-02-27 15:12:21,839 | INFO     | left removable region: 20
[2026-02-27 16:13:01] 2026-02-27 15:12:21,840 | INFO     | sum of square deviations: 1177156955.0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,840 | INFO     | sum of deviations: 2439913715.5000005
[2026-02-27 16:13:01] 2026-02-27 15:12:21,841 | INFO     | mean x: 1772199733.5
[2026-02-27 16:13:01] 2026-02-27 15:12:21,841 | INFO     | mean y: 2351251.455128205
[2026-02-27 16:13:01] 2026-02-27 15:12:21,841 | INFO     | intersect: -3670917991.024177
[2026-02-27 16:13:01] 2026-02-27 15:12:21,841 | INFO     | chi2: 0.00015028880938939876
[2026-02-27 16:13:01] 2026-02-27 15:12:21,841 | INFO     | current memory leak: 2.07 B/s (using 156 data points, chi2=0.00)
[2026-02-27 16:13:01] 2026-02-27 15:12:21,841 | INFO     | could have reported an average CPU frequency of 2721 MHz (10 samples)
[2026-02-27 16:13:01] 2026-02-27 15:12:21,842 | INFO     | ..............................
[2026-02-27 16:13:01] 2026-02-27 15:12:21,842 | INFO     | . Timing measurements:
[2026-02-27 16:13:01] 2026-02-27 15:12:21,842 | INFO     | . get job = 0 s
[2026-02-27 16:13:01] 2026-02-27 15:12:21,842 | INFO     | . initial setup = 8 s
[2026-02-27 16:13:01] 2026-02-27 15:12:21,842 | INFO     | . payload setup = 9 s
[2026-02-27 16:13:01] 2026-02-27 15:12:21,842 | INFO     | . stage-in = 0 s
[2026-02-27 16:13:01] 2026-02-27 15:12:21,842 | INFO     | . payload execution = 11357 s
[2026-02-27 16:13:01] 2026-02-27 15:12:21,842 | INFO     | . stage-out = 1 s
[2026-02-27 16:13:01] 2026-02-27 15:12:21,842 | INFO     | . log creation = 0 s
[2026-02-27 16:13:01] 2026-02-27 15:12:21,842 | INFO     | ..............................
[2026-02-27 16:13:01] 2026-02-27 15:12:21,936 | INFO     | 
[2026-02-27 16:13:01] 2026-02-27 15:12:21,936 | INFO     | job summary report
[2026-02-27 16:13:01] 2026-02-27 15:12:21,936 | INFO     | --------------------------------------------------
[2026-02-27 16:13:01] 2026-02-27 15:12:21,936 | INFO     | PanDA job id: 7030275554
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | task id: 48838416
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | errors: (none)
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | pilot state: finished 
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | transexitcode: 0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | exeerrorcode: 0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | exeerrordiag: 
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | exitcode: 0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | exitmsg: OK
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | cpuconsumptiontime: 43502 s
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | nevents: 400
[2026-02-27 16:13:01] 2026-02-27 15:12:21,937 | INFO     | neventsw: 0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,938 | INFO     | pid: 3672315
[2026-02-27 16:13:01] 2026-02-27 15:12:21,938 | INFO     | pgrp: 3672315
[2026-02-27 16:13:01] 2026-02-27 15:12:21,938 | INFO     | corecount: 4
[2026-02-27 16:13:01] 2026-02-27 15:12:21,938 | INFO     | event service: False
[2026-02-27 16:13:01] 2026-02-27 15:12:21,938 | INFO     | sizes: {0: 2287284, 1: 2287745, 11: 2287745, 11371: 2317638, 11372: 2326660, 11373: 2326716, 11374: 2327038}
[2026-02-27 16:13:01] 2026-02-27 15:12:21,938 | INFO     | --------------------------------------------------
[2026-02-27 16:13:01] 2026-02-27 15:12:21,938 | INFO     | 
[2026-02-27 16:13:01] 2026-02-27 15:12:21,938 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2026-02-27 16:13:01] 2026-02-27 15:12:21,967 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,968 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,968 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,968 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,968 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,968 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,968 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,969 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-27 16:13:01] 2026-02-27 15:12:21,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,969 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-27 16:13:01] 2026-02-27 15:12:21,970 | INFO     | job 7030275554 has completed (purged errors)
[2026-02-27 16:13:01] 2026-02-27 15:12:21,970 | INFO     | overall cleanup function is called
[2026-02-27 16:13:01] 2026-02-27 15:12:22,979 | INFO     | --- collectZombieJob: --- 10, [3672315]
[2026-02-27 16:13:01] 2026-02-27 15:12:22,979 | INFO     | zombie collector waiting for pid 3672315
[2026-02-27 16:13:01] 2026-02-27 15:12:22,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-27 16:13:01] 2026-02-27 15:12:22,979 | INFO     | collected zombie processes
[2026-02-27 16:13:01] 2026-02-27 15:12:22,979 | INFO     | will attempt to kill all subprocesses of pid=3672315
[2026-02-27 16:13:01] 2026-02-27 15:12:23,772 | INFO     | process IDs to be killed: [3672315] (in reverse order)
[2026-02-27 16:13:01] 2026-02-27 15:12:24,099 | WARNING  | found no corresponding commands to process id(s)
[2026-02-27 16:13:01] 2026-02-27 15:12:24,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-27 16:13:01] 2026-02-27 15:12:24,125 | INFO     | did not find any defunct processes belonging to 3672315
[2026-02-27 16:13:01] 2026-02-27 15:12:24,144 | INFO     | did not find any defunct processes belonging to 3672315
[2026-02-27 16:13:01] 2026-02-27 15:12:24,145 | INFO     | ready for new job
[2026-02-27 16:13:01] 2026-02-27 15:12:24,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-27 16:13:01] 2026-02-27 15:12:24,147 | INFO     | **************************************
[2026-02-27 16:13:01] 2026-02-27 15:12:24,147 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-27 16:13:01] 2026-02-27 15:12:24,147 | INFO     | **************************************
[2026-02-27 16:13:01] 2026-02-27 15:12:24,147 | INFO     | 
[2026-02-27 16:13:01] 2026-02-27 15:12:24,155 | INFO     | architecture information:
[2026-02-27 16:13:01] 2026-02-27 15:12:24,155 | INFO     | executing command: cat /etc/os-release
[2026-02-27 16:13:01] 2026-02-27 15:12:24,176 | INFO     | cat /etc/os-release:
[2026-02-27 16:13:01] NAME="CentOS Linux"
[2026-02-27 16:13:01] VERSION="7 (Core)"
[2026-02-27 16:13:01] ID="centos"
[2026-02-27 16:13:01] ID_LIKE="rhel fedora"
[2026-02-27 16:13:01] VERSION_ID="7"
[2026-02-27 16:13:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-27 16:13:01] ANSI_COLOR="0;31"
[2026-02-27 16:13:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-27 16:13:01] HOME_URL="https://www.centos.org/"
[2026-02-27 16:13:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-27 16:13:01] 
[2026-02-27 16:13:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-27 16:13:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-27 16:13:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-27 16:13:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-27 16:13:01] 
[2026-02-27 16:13:01] 2026-02-27 15:12:24,176 | INFO     | **************************************
[2026-02-27 16:13:01] 2026-02-27 15:12:24,679 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2026-02-27 16:13:01] 2026-02-27 15:12:24,706 | INFO     | sufficient remaining disk space (3307687903232 B)
[2026-02-27 16:13:01] 2026-02-27 15:12:24,707 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-27 16:13:01] 2026-02-27 15:12:24,707 | INFO     | current server update state: UPDATING_FINAL
[2026-02-27 16:13:01] 2026-02-27 15:12:24,707 | INFO     | update_server=False
[2026-02-27 16:13:01] 2026-02-27 15:12:24,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-27 16:13:01] 2026-02-27 15:12:24,708 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-27 16:13:01] 2026-02-27 15:12:24,905 | INFO     | all data control threads have been joined
[2026-02-27 16:13:01] 2026-02-27 15:12:25,006 | INFO     | all payload control threads have been joined
[2026-02-27 16:13:01] 2026-02-27 15:12:25,413 | INFO     | all job control threads have been joined
[2026-02-27 16:13:01] 2026-02-27 15:12:25,437 | WARNING  | process 3672315 can no longer be monitored (due to stat problems) - aborting
[2026-02-27 16:13:01] 2026-02-27 15:12:25,634 | INFO     | job.realtimelogging is not enabled
[2026-02-27 16:13:01] 2026-02-27 15:12:25,713 | INFO     | [job] retrieve thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:25,744 | INFO     | [job] validate thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:25,891 | INFO     | [payload] failed_post thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:25,911 | INFO     | [data] control thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:25,913 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 16:13:01] 2026-02-27 15:12:25,913 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-27 16:13:01] 2026-02-27 15:12:25,914 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-27 16:13:01] 2026-02-27 15:12:25,914 | WARNING  | maxPSS not found in memory monitor output
[2026-02-27 16:13:01] 2026-02-27 15:12:25,914 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot108/slots/0/PanDA_Pilot-7030275554/payload.stdout) since it has not been created yet
[2026-02-27 16:13:01] 2026-02-27 15:12:25,915 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2026-02-27 16:13:01] 2026-02-27 15:12:25,942 | INFO     | sufficient remaining disk space (3307687903232 B)
[2026-02-27 16:13:01] 2026-02-27 15:12:25,943 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-27 16:13:01] 2026-02-27 15:12:25,943 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-7030275554/HITS.48838416._002930.pool.root.1 since it does not exist
[2026-02-27 16:13:01] 2026-02-27 15:12:25,966 | INFO     | [job] create_data_payload thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:25,988 | INFO     | [payload] validate_pre thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:26,011 | INFO     | [payload] control thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:26,089 | INFO     | [payload] execute_payloads thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:26,419 | INFO     | [job] control thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:26,640 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:26,702 | INFO     | number of running child processes to parent process 3672315: 1
[2026-02-27 16:13:01] 2026-02-27 15:12:26,702 | INFO     | maximum number of monitored processes: 6
[2026-02-27 16:13:01] 2026-02-27 15:12:26,702 | INFO     | aborting job monitoring since job object (job id=7030275554) has expired
[2026-02-27 16:13:01] 2026-02-27 15:12:26,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-27 16:13:01] 2026-02-27 15:12:26,702 | INFO     | will abort loop
[2026-02-27 16:13:01] 2026-02-27 15:12:26,713 | INFO     | [data] copytool_out thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:26,797 | INFO     | [data] copytool_in thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:26,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-27 16:13:01] 2026-02-27 15:12:26,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-27 16:13:01] 2026-02-27 15:12:27,002 | INFO     | [payload] validate_post thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:27,707 | INFO     | [job] job monitor thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:27,951 | INFO     | [job] queue monitor thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:30,828 | INFO     | [data] queue_monitor thread has finished
[2026-02-27 16:13:01] 2026-02-27 15:12:55,028 | INFO     | PID=3656754 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-27 16:13:01] 2026-02-27 15:12:55,028 | INFO     | .. there are 21 such processes running
[2026-02-27 16:13:01] 2026-02-27 15:12:55,029 | INFO     | found 0 job(s) in 20 queues
[2026-02-27 16:13:01] 2026-02-27 15:12:55,029 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-27 16:13:01] 2026-02-27 15:12:55,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-27 16:13:01] 2026-02-27 15:12:55,313 | INFO     | [monitor] cgroup control has ended
[2026-02-27 16:13:01] 2026-02-27 15:12:55,648 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23025892116288)>', '<ExcThread(monitor, started 23025579702016)>']
[2026-02-27 16:13:01] 2026-02-27 15:12:56,033 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-27 16:13:01] 2026-02-27 15:12:56,034 | INFO     | [monitor] control thread has ended
[2026-02-27 16:13:01] 2026-02-27 15:13:00,673 | INFO     | all workflow threads have been joined
[2026-02-27 16:13:01] 2026-02-27 15:13:00,674 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-27 16:13:01] 2026-02-27 15:13:00,674 | INFO     | traces error code: 0
[2026-02-27 16:13:01] 2026-02-27 15:13:00,674 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-27 16:13:01] 2026-02-27 15:13:00,812 [wrapper] ==== pilot stdout END ====
[2026-02-27 16:13:01] 2026-02-27 15:13:00,815 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-27 16:13:01] 2026-02-27 15:13:00,817 [wrapper] pilotpid: 3656754
[2026-02-27 16:13:01] 2026-02-27 15:13:00,819 [wrapper] Pilot exit status: 0
[2026-02-27 16:13:01] 2026-02-27 15:13:00,834 [wrapper] pandaids: 7030275554
[2026-02-27 16:13:01] 2026-02-27 15:13:00,966 [wrapper] cleanup supervisor_pilot 4006050 3656756
[2026-02-27 16:13:01] 2026-02-27 15:13:00,970 [wrapper] Test setup, not cleaning
[2026-02-27 16:13:01] 2026-02-27 15:13:00,972 [wrapper] apfmon messages muted
[2026-02-27 16:13:01] 2026-02-27 15:13:00,974 [wrapper] ==== wrapper stdout END ====
[2026-02-27 16:13:01] 2026-02-27 15:13:00,977 [wrapper] ==== wrapper stderr END ====
[2026-02-27 16:13:01]  *** Error codes and diagnostics ***
[2026-02-27 16:13:01]     "exeErrorCode": 0,
[2026-02-27 16:13:01]     "exeErrorDiag": "",
[2026-02-27 16:13:01]     "pilotErrorCode": 0,
[2026-02-27 16:13:01]     "pilotErrorDiag": "",
[2026-02-27 16:13:01]  *** Listing of results directory ***
[2026-02-27 16:13:01] total 509484
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc    584627 Feb 25 14:38 pilot3.tar.gz
[2026-02-27 16:13:01] -rwx------ 1 boinc boinc     36322 Feb 25 14:40 runpilot2-wrapper.sh
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc      5111 Feb 25 14:41 queuedata.json
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc       100 Feb 27 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-27 16:13:01] -rwxr-xr-x 1 boinc boinc      7986 Feb 27 13:02 run_atlas
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc       105 Feb 27 13:02 job.xml
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc      6700 Feb 27 13:02 init_data.xml
[2026-02-27 16:13:01] -rw-r--r-- 2 boinc boinc 292008468 Feb 27 13:02 EVNT.48220085._000120.pool.root.1
[2026-02-27 16:13:01] drwxrwx--x 2 boinc boinc      4096 Feb 27 13:02 shared
[2026-02-27 16:13:01] -rw-r--r-- 2 boinc boinc    597961 Feb 27 13:02 input.tar.gz
[2026-02-27 16:13:01] -rw-r--r-- 2 boinc boinc     15845 Feb 27 13:02 start_atlas.sh
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc         0 Feb 27 13:02 boinc_lockfile
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc      2568 Feb 27 13:02 pandaJob.out
[2026-02-27 16:13:01] -rw------- 1 boinc boinc    998473 Feb 27 13:02 agis_schedconf.cvmfs.json
[2026-02-27 16:13:01] -rw------- 1 boinc boinc       444 Feb 27 13:02 workernode_map.json
[2026-02-27 16:13:01] drwx------ 5 boinc boinc      4096 Feb 27 13:02 pilot3
[2026-02-27 16:13:01] -rw------- 1 boinc boinc 221886867 Feb 27 16:11 HITS.48838416._002930.pool.root.1
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc       528 Feb 27 16:11 boinc_task_state.xml
[2026-02-27 16:13:01] -rw------- 1 boinc boinc      1029 Feb 27 16:12 memory_monitor_summary.json
[2026-02-27 16:13:01] -rw------- 1 boinc boinc   1516111 Feb 27 16:12 agis_ddmendpoints.agis.ALL.json
[2026-02-27 16:13:01] -rw------- 1 boinc boinc    350825 Feb 27 16:12 log.48838416._002930.job.log.tgz.1
[2026-02-27 16:13:01] -rw------- 1 boinc boinc      6351 Feb 27 16:12 heartbeat.json
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc      8192 Feb 27 16:12 boinc_mmap_file
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc        26 Feb 27 16:12 wrapper_checkpoint.txt
[2026-02-27 16:13:01] -rw------- 1 boinc boinc        95 Feb 27 16:12 pilot_heartbeat.json
[2026-02-27 16:13:01] -rw------- 1 boinc boinc      6452 Feb 27 16:13 pilotlog.txt
[2026-02-27 16:13:01] -rw------- 1 boinc boinc   1590658 Feb 27 16:13 log.48838416._002930.job.log.1
[2026-02-27 16:13:01] -rw------- 1 boinc boinc       357 Feb 27 16:13 output.list
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc       620 Feb 27 16:13 runtime_log
[2026-02-27 16:13:01] -rw------- 1 boinc boinc   1955840 Feb 27 16:13 result.tar.gz
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc      9222 Feb 27 16:13 runtime_log.err
[2026-02-27 16:13:01] -rw------- 1 boinc boinc       666 Feb 27 16:13 LvgNDmCJUF9n9Rq4apOajLDm4fhM0noT9bVooX4SDm9gyKDmSB1QJm.diag
[2026-02-27 16:13:01] -rw-r--r-- 1 boinc boinc     21293 Feb 27 16:13 stderr.txt
[2026-02-27 16:13:01] HITS file was successfully produced:
[2026-02-27 16:13:01] -rw------- 1 boinc boinc 221886867 Feb 27 16:11 shared/HITS.pool.root.1
[2026-02-27 16:13:01]  *** Contents of shared directory: ***
[2026-02-27 16:13:01] total 504376
[2026-02-27 16:13:01] -rw-r--r-- 2 boinc boinc 292008468 Feb 27 13:02 ATLAS.root_0
[2026-02-27 16:13:01] -rw-r--r-- 2 boinc boinc    597961 Feb 27 13:02 input.tar.gz
[2026-02-27 16:13:01] -rw-r--r-- 2 boinc boinc     15845 Feb 27 13:02 start_atlas.sh
[2026-02-27 16:13:01] -rw------- 1 boinc boinc 221886867 Feb 27 16:11 HITS.pool.root.1
[2026-02-27 16:13:01] -rw------- 1 boinc boinc   1955840 Feb 27 16:13 result.tar.gz
16:13:02 (3645444): run_atlas exited; CPU time 44188.251361
16:13:02 (3645444): called boinc_finish(0)

</stderr_txt>
]]>

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