Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:53:04 (110498): wrapper (7.7.26015): starting
17:53:04 (110498): wrapper: running run_atlas (--nthreads 4)
[2026-02-25 17:53:04] Arguments: --nthreads 4
[2026-02-25 17:53:04] Threads: 4
[2026-02-25 17:53:04] Checking for CVMFS
[2026-02-25 17:53:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-25 17:53:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-25 17:53:05] Running cvmfs_config stat atlas.cern.ch
[2026-02-25 17:53:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-25 17:53:05] 2.9.2.0 110694 0 29112 156618 4 1 26208369 36864001 0 130560 0 0 0.000 1336 20553 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-25 17:53:05] CVMFS is ok
[2026-02-25 17:53:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-25 17:53:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-25 17:53:05] Further information can be found at the LHC@home message board.
[2026-02-25 17:53:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-25 17:53:05] Checking for apptainer binary...
[2026-02-25 17:53:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-25 17:53:05] Running /usr/bin/apptainer --version
[2026-02-25 17:53:06] apptainer version 1.4.1-1.1
[2026-02-25 17:53:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-25 17:53:06] thA314
[2026-02-25 17:53:06] apptainer works
[2026-02-25 17:53:06] Set ATHENA_PROC_NUMBER=4
[2026-02-25 17:53:06] Set ATHENA_CORE_NUMBER=4
[2026-02-25 17:53:06] Starting ATLAS job with PandaID=7030274508
[2026-02-25 17:53:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-25 19:19:32]  *** The last 200 lines of the pilot log: ***
[2026-02-25 19:19:32] 2026-02-25 18:18:30,722 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-25 19:19:32] 2026-02-25 18:18:30,722 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-25 19:19:32] 2026-02-25 18:18:30,722 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-25 19:19:32] 2026-02-25 18:18:30,722 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-25 19:19:32] 2026-02-25 18:18:30,722 | INFO     | job 7030274508 has completed (purged errors)
[2026-02-25 19:19:32] 2026-02-25 18:18:30,722 | INFO     | overall cleanup function is called
[2026-02-25 19:19:32] 2026-02-25 18:18:31,729 | INFO     | --- collectZombieJob: --- 10, [119372]
[2026-02-25 19:19:32] 2026-02-25 18:18:31,729 | INFO     | zombie collector waiting for pid 119372
[2026-02-25 19:19:32] 2026-02-25 18:18:31,729 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-25 19:19:32] 2026-02-25 18:18:31,729 | INFO     | collected zombie processes
[2026-02-25 19:19:32] 2026-02-25 18:18:31,729 | INFO     | will attempt to kill all subprocesses of pid=119372
[2026-02-25 19:19:32] 2026-02-25 18:18:31,784 | INFO     | process IDs to be killed: [119372] (in reverse order)
[2026-02-25 19:19:32] 2026-02-25 18:18:31,821 | WARNING  | found no corresponding commands to process id(s)
[2026-02-25 19:19:32] 2026-02-25 18:18:31,822 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-25 19:19:32] 2026-02-25 18:18:31,824 | INFO     | did not find any defunct processes belonging to 119372
[2026-02-25 19:19:32] 2026-02-25 18:18:31,826 | INFO     | did not find any defunct processes belonging to 119372
[2026-02-25 19:19:32] 2026-02-25 18:18:31,826 | INFO     | ready for new job
[2026-02-25 19:19:32] 2026-02-25 18:18:31,826 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-25 19:19:32] 2026-02-25 18:18:31,826 | INFO     | **************************************
[2026-02-25 19:19:32] 2026-02-25 18:18:31,826 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-25 19:19:32] 2026-02-25 18:18:31,826 | INFO     | **************************************
[2026-02-25 19:19:32] 2026-02-25 18:18:31,827 | INFO     | 
[2026-02-25 19:19:32] 2026-02-25 18:18:31,827 | INFO     | architecture information:
[2026-02-25 19:19:32] 2026-02-25 18:18:31,827 | INFO     | executing command: cat /etc/os-release
[2026-02-25 19:19:32] 2026-02-25 18:18:31,841 | INFO     | cat /etc/os-release:
[2026-02-25 19:19:32] NAME="CentOS Linux"
[2026-02-25 19:19:32] VERSION="7 (Core)"
[2026-02-25 19:19:32] ID="centos"
[2026-02-25 19:19:32] ID_LIKE="rhel fedora"
[2026-02-25 19:19:32] VERSION_ID="7"
[2026-02-25 19:19:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-25 19:19:32] ANSI_COLOR="0;31"
[2026-02-25 19:19:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-25 19:19:32] HOME_URL="https://www.centos.org/"
[2026-02-25 19:19:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-25 19:19:32] 
[2026-02-25 19:19:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-25 19:19:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-25 19:19:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-25 19:19:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-25 19:19:32] 
[2026-02-25 19:19:32] 2026-02-25 18:18:31,841 | INFO     | **************************************
[2026-02-25 19:19:32] 2026-02-25 18:18:32,345 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-25 19:19:32] 2026-02-25 18:18:32,362 | INFO     | sufficient remaining disk space (234064183296 B)
[2026-02-25 19:19:32] 2026-02-25 18:18:32,363 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-25 19:19:32] 2026-02-25 18:18:32,363 | INFO     | current server update state: UPDATING_FINAL
[2026-02-25 19:19:32] 2026-02-25 18:18:32,363 | INFO     | update_server=False
[2026-02-25 19:19:32] 2026-02-25 18:18:32,363 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-25 19:19:32] 2026-02-25 18:18:32,363 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-25 19:19:32] 2026-02-25 18:18:32,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-25 19:19:32] 2026-02-25 18:18:32,363 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-25 19:19:32] 2026-02-25 18:18:32,363 | INFO     | aborting loop
[2026-02-25 19:19:32] 2026-02-25 18:18:32,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-25 19:19:32] 2026-02-25 18:18:32,645 | INFO     | all job control threads have been joined
[2026-02-25 19:19:32] 2026-02-25 18:18:32,866 | INFO     | all payload control threads have been joined
[2026-02-25 19:19:32] 2026-02-25 18:18:33,368 | INFO     | [job] retrieve thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:33,369 | INFO     | [job] job monitor thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:33,369 | INFO     | [job] queue monitor thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:33,414 | INFO     | all data control threads have been joined
[2026-02-25 19:19:32] 2026-02-25 18:18:33,534 | INFO     | [data] copytool_in thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:33,650 | INFO     | [job] control thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:33,872 | INFO     | [payload] control thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:34,111 | INFO     | [payload] execute_payloads thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:34,369 | INFO     | [data] copytool_out thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:34,419 | INFO     | [data] control thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:34,450 | INFO     | [payload] validate_post thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:34,666 | INFO     | [payload] failed_post thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:34,716 | INFO     | [job] validate thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:34,849 | INFO     | [job] create_data_payload thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:34,852 | INFO     | [payload] validate_pre thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:36,369 | INFO     | [data] queue_monitor thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:18:43,040 | INFO     | job.realtimelogging is not enabled
[2026-02-25 19:19:32] 2026-02-25 18:18:44,046 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-25 19:19:32] 2026-02-25 18:19:03,424 | INFO     | PID=114846 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-25 19:19:32] 2026-02-25 18:19:03,425 | INFO     | found 0 job(s) in 20 queues
[2026-02-25 19:19:32] 2026-02-25 18:19:03,425 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-25 19:19:32] 2026-02-25 18:19:03,425 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-25 19:19:32] 2026-02-25 18:19:26,973 | INFO     | [monitor] cgroup control has ended
[2026-02-25 19:19:32] 2026-02-25 18:19:27,275 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140298403731264)>', '<ExcThread(monitor, started 140297765897984)>']
[2026-02-25 19:19:32] 2026-02-25 18:19:27,552 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-25 19:19:32] 2026-02-25 18:19:27,553 | INFO     | [monitor] control thread has ended
[2026-02-25 19:19:32] 2026-02-25 18:19:32,285 | INFO     | all workflow threads have been joined
[2026-02-25 19:19:32] 2026-02-25 18:19:32,285 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-25 19:19:32] 2026-02-25 18:19:32,286 | INFO     | traces error code: 0
[2026-02-25 19:19:32] 2026-02-25 18:19:32,286 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-25 19:19:32] 2026-02-25 18:19:32,366 [wrapper] ==== pilot stdout END ====
[2026-02-25 19:19:32] 2026-02-25 18:19:32,370 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-25 19:19:32] 2026-02-25 18:19:32,374 [wrapper] pilotpid: 114846
[2026-02-25 19:19:32] 2026-02-25 18:19:32,378 [wrapper] Pilot exit status: 0
[2026-02-25 19:19:32] 2026-02-25 18:19:32,392 [wrapper] pandaids: 7030274508
[2026-02-25 19:19:32] 2026-02-25 18:19:32,417 [wrapper] cleanup supervisor_pilot  126058 114847
[2026-02-25 19:19:32] 2026-02-25 18:19:32,422 [wrapper] Test setup, not cleaning
[2026-02-25 19:19:32] 2026-02-25 18:19:32,426 [wrapper] apfmon messages muted
[2026-02-25 19:19:32] 2026-02-25 18:19:32,430 [wrapper] ==== wrapper stdout END ====
[2026-02-25 19:19:32] 2026-02-25 18:19:32,434 [wrapper] ==== wrapper stderr END ====
[2026-02-25 19:19:32]  *** Error codes and diagnostics ***
[2026-02-25 19:19:32]     "exeErrorCode": 0,
[2026-02-25 19:19:32]     "exeErrorDiag": "",
[2026-02-25 19:19:32]     "pilotErrorCode": 0,
[2026-02-25 19:19:32]     "pilotErrorDiag": "",
[2026-02-25 19:19:32]  *** Listing of results directory ***
[2026-02-25 19:19:32] total 512472
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc    584627 Feb 25 14:22 pilot3.tar.gz
[2026-02-25 19:19:32] -rwx------ 1 boinc boinc     36322 Feb 25 14:36 runpilot2-wrapper.sh
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc      5111 Feb 25 14:36 queuedata.json
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc       100 Feb 25 17:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-25 19:19:32] -rwxr-xr-x 1 boinc boinc      7986 Feb 25 17:53 run_atlas
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc       105 Feb 25 17:53 job.xml
[2026-02-25 19:19:32] -rw-r--r-- 2 boinc boinc 291792739 Feb 25 17:53 EVNT.48220085._000100.pool.root.1
[2026-02-25 19:19:32] -rw-r--r-- 2 boinc boinc    597960 Feb 25 17:53 input.tar.gz
[2026-02-25 19:19:32] -rw-r--r-- 2 boinc boinc     15845 Feb 25 17:53 start_atlas.sh
[2026-02-25 19:19:32] drwxrwx--x 2 boinc boinc      4096 Feb 25 17:53 shared
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc         0 Feb 25 17:53 boinc_setup_complete
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc      6376 Feb 25 17:53 init_data.xml
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc         0 Feb 25 17:53 boinc_lockfile
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc      2567 Feb 25 17:53 pandaJob.out
[2026-02-25 19:19:32] -rw------- 1 boinc boinc    995649 Feb 25 17:53 agis_schedconf.cvmfs.json
[2026-02-25 19:19:32] -rw------- 1 boinc boinc   1513015 Feb 25 17:53 agis_ddmendpoints.agis.ALL.json
[2026-02-25 19:19:32] -rw------- 1 boinc boinc       427 Feb 25 17:53 workernode_map.json
[2026-02-25 19:19:32] drwx------ 5 boinc boinc      4096 Feb 25 17:53 pilot3
[2026-02-25 19:19:32] -rw------- 1 boinc boinc 227022866 Feb 25 19:18 HITS.48838416._002440.pool.root.1
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc       529 Feb 25 19:18 boinc_task_state.xml
[2026-02-25 19:19:32] -rw------- 1 boinc boinc      1029 Feb 25 19:18 memory_monitor_summary.json
[2026-02-25 19:19:32] -rw------- 1 boinc boinc    275338 Feb 25 19:18 log.48838416._002440.job.log.tgz.1
[2026-02-25 19:19:32] -rw------- 1 boinc boinc      6310 Feb 25 19:18 heartbeat.json
[2026-02-25 19:19:32] -rw------- 1 boinc boinc        95 Feb 25 19:19 pilot_heartbeat.json
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc        27 Feb 25 19:19 wrapper_checkpoint.txt
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc      8192 Feb 25 19:19 boinc_mmap_file
[2026-02-25 19:19:32] -rw------- 1 boinc boinc      4819 Feb 25 19:19 pilotlog.txt
[2026-02-25 19:19:32] -rw------- 1 boinc boinc    744943 Feb 25 19:19 log.48838416._002440.job.log.1
[2026-02-25 19:19:32] -rw------- 1 boinc boinc       357 Feb 25 19:19 output.list
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc       620 Feb 25 19:19 runtime_log
[2026-02-25 19:19:32] -rw------- 1 boinc boinc   1034240 Feb 25 19:19 result.tar.gz
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc      8896 Feb 25 19:19 runtime_log.err
[2026-02-25 19:19:32] -rw------- 1 boinc boinc       657 Feb 25 19:19 12zKDmQFUF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm48zKDmOhdcdn.diag
[2026-02-25 19:19:32] -rw-r--r-- 1 boinc boinc     11280 Feb 25 19:19 stderr.txt
[2026-02-25 19:19:32] HITS file was successfully produced:
[2026-02-25 19:19:32] -rw------- 1 boinc boinc 227022866 Feb 25 19:18 shared/HITS.pool.root.1
[2026-02-25 19:19:32]  *** Contents of shared directory: ***
[2026-02-25 19:19:32] total 508280
[2026-02-25 19:19:32] -rw-r--r-- 2 boinc boinc 291792739 Feb 25 17:53 ATLAS.root_0
[2026-02-25 19:19:32] -rw-r--r-- 2 boinc boinc    597960 Feb 25 17:53 input.tar.gz
[2026-02-25 19:19:32] -rw-r--r-- 2 boinc boinc     15845 Feb 25 17:53 start_atlas.sh
[2026-02-25 19:19:32] -rw------- 1 boinc boinc 227022866 Feb 25 19:18 HITS.pool.root.1
[2026-02-25 19:19:32] -rw------- 1 boinc boinc   1034240 Feb 25 19:19 result.tar.gz
19:19:33 (110498): run_atlas exited; CPU time 19377.453027
19:19:33 (110498): called boinc_finish(0)

</stderr_txt>
]]>

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