Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-28 11:08:38 (12344): vboxwrapper version 26210
2026-02-28 11:08:38 (12344): BOINC client version: 8.2.8
2026-02-28 11:08:39 (12344): Detected: VirtualBox VboxManage Interface (Version: 6.1.34)
2026-02-28 11:08:39 (12344): Successfully copied 'init_data.xml' to the shared directory.
2026-02-28 11:08:39 (12344): Create VM. (boinc_bd3da703ff184136, slot#4)
2026-02-28 11:08:40 (12344): Setting Memory Size for VM. (4800MB)
2026-02-28 11:08:40 (12344): Setting CPU Count for VM. (8)
2026-02-28 11:08:40 (12344): Setting Chipset Options for VM.
2026-02-28 11:08:40 (12344): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-28 11:08:41 (12344): Setting Boot Options for VM.
2026-02-28 11:08:41 (12344): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-28 11:08:41 (12344): Enabling VM Network Access.
2026-02-28 11:08:42 (12344): Disabling USB Support for VM.
2026-02-28 11:08:42 (12344): Disabling COM Port Support for VM.
2026-02-28 11:08:42 (12344): Disabling LPT Port Support for VM.
2026-02-28 11:08:42 (12344): Disabling Audio Support for VM.
2026-02-28 11:08:43 (12344): Disabling Clipboard Support for VM.
2026-02-28 11:08:43 (12344): Disabling Drag and Drop Support for VM.
2026-02-28 11:08:43 (12344): Adding storage controller(s) to VM.
2026-02-28 11:08:43 (12344): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-28 11:08:44 (12344): Adding VirtualBox Guest Additions to VM.
2026-02-28 11:08:44 (12344): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-28 11:08:44 (12344): forwarding host port 54880 to guest port 80
2026-02-28 11:08:45 (12344): Enabling remote desktop for VM.
2026-02-28 11:08:45 (12344): Required extension pack not installed, remote desktop not enabled.
2026-02-28 11:08:45 (12344): Enabling shared directory for VM.
2026-02-28 11:08:45 (12344): Starting VM using VBoxManage interface. (boinc_bd3da703ff184136, slot#4)
2026-02-28 11:08:50 (12344): Successfully started VM. (PID = '4584')
2026-02-28 11:08:50 (12344): Reporting VM Process ID to BOINC.
2026-02-28 11:08:50 (12344): Guest Log: BIOS: VirtualBox 6.1.34
2026-02-28 11:08:50 (12344): Guest Log: CPUID EDX: 0x178bfbff
2026-02-28 11:08:50 (12344): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-28 11:08:50 (12344): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-28 11:08:50 (12344): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-28 11:08:50 (12344): Detected: Web Application Enabled (http://localhost:54880)
2026-02-28 11:08:50 (12344): Preference change detected
2026-02-28 11:08:50 (12344): Setting CPU throttle for VM. (100%)
2026-02-28 11:08:50 (12344): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-28 11:08:52 (12344): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-28 11:08:52 (12344): Guest Log: BIOS: Booting from Hard Disk...
2026-02-28 11:08:55 (12344): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-28 11:08:55 (12344): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-28 11:08:55 (12344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-28 11:09:01 (12344): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-28 11:09:01 (12344): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-28 11:09:05 (12344): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-28 11:09:05 (12344): Guest Log: 00:00:00.000119 main     Log opened 2026-02-28T11:09:02.596745000Z
2026-02-28 11:09:05 (12344): Guest Log: 00:00:00.000208 main     OS Product: Linux
2026-02-28 11:09:05 (12344): Guest Log: 00:00:00.000231 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-28 11:09:05 (12344): Guest Log: 00:00:00.000250 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-28 11:09:05 (12344): Guest Log: 00:00:00.000270 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-28 11:09:05 (12344): Guest Log: 00:00:00.000270 main     Process ID: 1388
2026-02-28 11:09:05 (12344): Guest Log: 00:00:00.000271 main     Package type: LINUX_64BITS_GENERIC
2026-02-28 11:09:05 (12344): Guest Log: 00:00:00.001071 main     5.2.32 r132073 started. Verbose level = 0
2026-02-28 11:09:05 (12344): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-28 11:09:05 (12344): Guest Log: [INFO] Mounting shared directory
2026-02-28 11:09:06 (12344): Guest Log: [INFO] Checking for init_data.xml
2026-02-28 11:09:09 (12344): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-28 11:09:09 (12344): Guest Log: [INFO] Detected branch: prod
2026-02-28 11:09:10 (12344): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-28 11:09:10 (12344): Guest Log: Copying input files
2026-02-28 11:09:11 (12344): Guest Log: Copied input files into RunAtlas.
2026-02-28 11:09:11 (12344): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-28 11:09:11 (12344): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-28 11:09:11 (12344): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-28 11:09:11 (12344): Guest Log: Further information can be found at the LHC@home message board.
2026-02-28 11:09:15 (12344): Guest Log: 00:00:10.002693 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 587 659 347 000ns (GuestNow=1 772 273 354 939 464 000 ns GuestLast=1 772 276 942 598 811 000 ns fSetTimeLastLoop=true )
2026-02-28 11:09:19 (12344): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-28 11:09:19 (12344): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-28 11:09:19 (12344): Guest Log: 2.6.3.0 1665 0 30148 156727 4 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-28 11:09:20 (12344): Guest Log: copied the webapp to /var/www
2026-02-28 11:09:20 (12344): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-28 11:09:20 (12344): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-28 11:09:20 (12344): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-28 11:09:21 (12344): Guest Log:  *** Starting ATLAS job. (PandaID=7030264866 taskID=48838600) ***
2026-02-28 12:48:55 (12344): Status Report: Elapsed Time: '6000.000000'
2026-02-28 12:48:55 (12344): Status Report: CPU Time: '44085.890625'
2026-02-28 13:27:31 (12344): Guest Log:  *** Job finished ***
2026-02-28 13:27:31 (12344): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:18,646 | INFO     | all workflow threads have been joined
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:18,647 | INFO     | end of generic workflow (traces error code: 0)
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:18,647 | INFO     | traces error code: 0
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:18,647 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,116 | INFO     | PID=6085 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,117 | INFO     | found 0 job(s) in 20 queues
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,118 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,118 | INFO     | [monitor] control thread has ended
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,200 [wrapper] ==== pilot stdout END ====
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,204 [wrapper] ==== wrapper stdout RESUME ====
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,208 [wrapper] pilotpid: 6085
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,212 [wrapper] Pilot exit status: 0
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,265 [wrapper] pandaids: 7030264866
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,292 [wrapper] cleanup supervisor_pilot 26544 6086
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,297 [wrapper] Test setup, not cleaning
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,302 [wrapper] apfmon messages muted
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,305 [wrapper] ==== wrapper stdout END ====
2026-02-28 13:27:31 (12344): Guest Log: 2026-02-28 12:27:29,309 [wrapper] ==== wrapper stderr END ====
2026-02-28 13:27:31 (12344): Guest Log:  *** Error codes and diagnostics ***
2026-02-28 13:27:31 (12344): Guest Log:     "exeErrorCode": 0,
2026-02-28 13:27:31 (12344): Guest Log:     "exeErrorDiag": "",
2026-02-28 13:27:31 (12344): Guest Log:     "pilotErrorCode": 0,
2026-02-28 13:27:31 (12344): Guest Log:     "pilotErrorDiag": "",
2026-02-28 13:27:31 (12344): Guest Log:  *** Listing of results directory ***
2026-02-28 13:27:31 (12344): Guest Log: total 200172
2026-02-28 13:27:31 (12344): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 25 13:22 pilot3.tar.gz
2026-02-28 13:27:31 (12344): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 25 13:30 runpilot2-wrapper.sh
2026-02-28 13:27:31 (12344): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 25 13:32 queuedata.json
2026-02-28 13:27:31 (12344): Guest Log: -rwxr-xr-x. 1 atlas atlas      8778 Feb 28 10:09 init_data.xml
2026-02-28 13:27:31 (12344): Guest Log: -rwxr-xr-x. 1 atlas atlas    597958 Feb 28 10:09 input.tar.gz
2026-02-28 13:27:31 (12344): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 28 10:09 start_atlas.sh
2026-02-28 13:27:31 (12344): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 28 10:09 EVNT.48220245._000024.pool.root.1 -> /data/./ATLAS.root_0
2026-02-28 13:27:31 (12344): Guest Log: -rw-r--r--. 1 atlas atlas      2575 Feb 28 10:09 pandaJob.out
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas    998790 Feb 28 10:09 agis_schedconf.cvmfs.json
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 28 10:09 agis_ddmendpoints.agis.ALL.json
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas       438 Feb 28 10:10 workernode_map.json
2026-02-28 13:27:31 (12344): Guest Log: drwx------. 5 atlas atlas      4096 Feb 28 10:10 pilot3
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas 198062779 Feb 28 12:26 HITS.48838600._000482.pool.root.1
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas      1030 Feb 28 12:26 memory_monitor_summary.json
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas    368783 Feb 28 12:26 log.48838600._000482.job.log.tgz.1
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas      6379 Feb 28 12:26 heartbeat.json
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas        95 Feb 28 12:27 pilot_heartbeat.json
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas       744 Feb 28 12:27 pilotlog.txt
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas   1155279 Feb 28 12:27 log.48838600._000482.job.log.1
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas       357 Feb 28 12:27 output.list
2026-02-28 13:27:31 (12344): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 28 12:27 runtime_log
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas   1546240 Feb 28 12:27 result.tar.gz
2026-02-28 13:27:31 (12344): Guest Log: -rw-r--r--. 1 atlas atlas      8751 Feb 28 12:27 runtime_log.err
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas       653 Feb 28 12:27 dNNLDmf9TF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmk7zKDm7fGh2n.diag
2026-02-28 13:27:31 (12344): Guest Log: Looking for outputfile HITS.48838600._000482.pool.root.1
2026-02-28 13:27:31 (12344): Guest Log: HITS file was successfully produced
2026-02-28 13:27:31 (12344): Guest Log: -rw-------. 1 atlas atlas 198062779 Feb 28 12:26 /home/atlas/RunAtlas/HITS.48838600._000482.pool.root.1
2026-02-28 13:27:32 (12344): Guest Log: Successfully finished the ATLAS job!
2026-02-28 13:27:32 (12344): Guest Log: Copying the results back to the shared directory!
2026-02-28 13:27:32 (12344): Guest Log:  *** Contents of shared directory: ***
2026-02-28 13:27:32 (12344): Guest Log: total 458572
2026-02-28 13:27:32 (12344): Guest Log: -rwxrwxrwx. 1 root root 269332705 Feb 28 10:08 ATLAS.root_0
2026-02-28 13:27:32 (12344): Guest Log: -rwxrwxrwx. 1 root root 198062779 Feb 28 12:27 HITS.pool.root.1
2026-02-28 13:27:32 (12344): Guest Log: -rwxrwxrwx. 1 root root      8778 Feb 28 10:08 init_data.xml
2026-02-28 13:27:32 (12344): Guest Log: -rwxrwxrwx. 1 root root    597958 Feb 25 16:53 input.tar.gz
2026-02-28 13:27:32 (12344): Guest Log: -rwxrwxrwx. 1 root root   1546240 Feb 28 12:27 result.tar.gz
2026-02-28 13:27:32 (12344): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 25 16:53 start_atlas.sh
2026-02-28 13:27:32 (12344): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-28 13:27:32 (12344): VM Completion File Detected.
2026-02-28 13:27:32 (12344): Powering off VM.
2026-02-28 13:27:33 (12344): Successfully stopped VM.
2026-02-28 13:27:33 (12344): Deregistering VM. (boinc_bd3da703ff184136, slot#4)
2026-02-28 13:27:33 (12344): Removing network bandwidth throttle group from VM.
2026-02-28 13:27:33 (12344): Removing VM from VirtualBox.
2026-02-28 13:27:38 (12344): called boinc_finish(0)

</stderr_txt>
]]>

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