Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:29:24 (396552): wrapper (7.7.26015): starting
01:29:24 (396552): wrapper: running run_atlas (--nthreads 3)
[2026-02-26 01:29:24] Arguments: --nthreads 3
[2026-02-26 01:29:24] Threads: 3
[2026-02-26 01:29:24] Checking for CVMFS
[2026-02-26 01:29:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-26 01:29:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-26 01:29:25] Running cvmfs_config stat atlas.cern.ch
[2026-02-26 01:29:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-26 01:29:25] 2.9.2.0 310932 645 61252 156636 4 50 28543851 36864001 0 130560 0 241924 99.971 32766 23674 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-26 01:29:25] CVMFS is ok
[2026-02-26 01:29:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-26 01:29:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-26 01:29:25] Further information can be found at the LHC@home message board.
[2026-02-26 01:29:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-26 01:29:25] Checking for apptainer binary...
[2026-02-26 01:29:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-26 01:29:25] Running /usr/bin/apptainer --version
[2026-02-26 01:29:25] apptainer version 1.4.1-1.1
[2026-02-26 01:29:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-26 01:29:25] atlasA223a
[2026-02-26 01:29:25] apptainer works
[2026-02-26 01:29:25] Set ATHENA_PROC_NUMBER=3
[2026-02-26 01:29:25] Set ATHENA_CORE_NUMBER=3
[2026-02-26 01:29:25] Starting ATLAS job with PandaID=7030293209
[2026-02-26 01:29:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-26 03:15:12]  *** The last 200 lines of the pilot log: ***
[2026-02-26 03:15:12] 2026-02-26 02:14:41,716 | INFO     | process IDs to be killed: [405039] (in reverse order)
[2026-02-26 03:15:12] 2026-02-26 02:14:41,742 | WARNING  | found no corresponding commands to process id(s)
[2026-02-26 03:15:12] 2026-02-26 02:14:41,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-26 03:15:12] 2026-02-26 02:14:41,743 | INFO     | did not find any defunct processes belonging to 405039
[2026-02-26 03:15:12] 2026-02-26 02:14:41,744 | INFO     | did not find any defunct processes belonging to 405039
[2026-02-26 03:15:12] 2026-02-26 02:14:41,744 | INFO     | ready for new job
[2026-02-26 03:15:12] 2026-02-26 02:14:41,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-26 03:15:12] 2026-02-26 02:14:41,745 | INFO     | **************************************
[2026-02-26 03:15:12] 2026-02-26 02:14:41,745 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-26 03:15:12] 2026-02-26 02:14:41,745 | INFO     | **************************************
[2026-02-26 03:15:12] 2026-02-26 02:14:41,745 | INFO     | 
[2026-02-26 03:15:12] 2026-02-26 02:14:41,745 | INFO     | architecture information:
[2026-02-26 03:15:12] 2026-02-26 02:14:41,745 | INFO     | executing command: cat /etc/os-release
[2026-02-26 03:15:12] 2026-02-26 02:14:41,755 | INFO     | cat /etc/os-release:
[2026-02-26 03:15:12] NAME="CentOS Linux"
[2026-02-26 03:15:12] VERSION="7 (Core)"
[2026-02-26 03:15:12] ID="centos"
[2026-02-26 03:15:12] ID_LIKE="rhel fedora"
[2026-02-26 03:15:12] VERSION_ID="7"
[2026-02-26 03:15:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-26 03:15:12] ANSI_COLOR="0;31"
[2026-02-26 03:15:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-26 03:15:12] HOME_URL="https://www.centos.org/"
[2026-02-26 03:15:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-26 03:15:12] 
[2026-02-26 03:15:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-26 03:15:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-26 03:15:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-26 03:15:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-26 03:15:12] 
[2026-02-26 03:15:12] 2026-02-26 02:14:41,755 | INFO     | **************************************
[2026-02-26 03:15:12] 2026-02-26 02:14:42,259 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-26 03:15:12] 2026-02-26 02:14:42,271 | INFO     | sufficient remaining disk space (330151493632 B)
[2026-02-26 03:15:12] 2026-02-26 02:14:42,271 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-26 03:15:12] 2026-02-26 02:14:42,271 | INFO     | current server update state: UPDATING_FINAL
[2026-02-26 03:15:12] 2026-02-26 02:14:42,271 | INFO     | update_server=False
[2026-02-26 03:15:12] 2026-02-26 02:14:42,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-26 03:15:12] 2026-02-26 02:14:42,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-26 03:15:12] 2026-02-26 02:14:42,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-26 03:15:12] 2026-02-26 02:14:42,623 | INFO     | all data control threads have been joined
[2026-02-26 03:15:12] 2026-02-26 02:14:42,992 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-26 03:15:12] 2026-02-26 02:14:42,992 | INFO     | aborting loop
[2026-02-26 03:15:12] 2026-02-26 02:14:43,277 | INFO     | [job] retrieve thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:43,277 | INFO     | [job] queue monitor thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:43,316 | INFO     | [payload] validate_post thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:43,457 | INFO     | all job control threads have been joined
[2026-02-26 03:15:12] 2026-02-26 02:14:43,626 | INFO     | [data] control thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:43,684 | INFO     | all payload control threads have been joined
[2026-02-26 03:15:12] 2026-02-26 02:14:43,686 | INFO     | [payload] failed_post thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:43,860 | INFO     | job.realtimelogging is not enabled
[2026-02-26 03:15:12] 2026-02-26 02:14:43,998 | INFO     | [job] job monitor thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:44,205 | INFO     | [job] validate thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:44,240 | INFO     | [job] create_data_payload thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:44,270 | INFO     | [payload] validate_pre thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:44,337 | INFO     | [data] copytool_in thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:44,451 | INFO     | [data] copytool_out thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:44,463 | INFO     | [job] control thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:44,592 | INFO     | [payload] execute_payloads thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:44,690 | INFO     | [payload] control thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:44,866 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:45,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-26 03:15:12] 2026-02-26 02:14:49,481 | INFO     | [data] queue_monitor thread has finished
[2026-02-26 03:15:12] 2026-02-26 02:14:54,772 | INFO     | [monitor] cgroup control has ended
[2026-02-26 03:15:12] 2026-02-26 02:14:56,423 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139977231914816)>', '<ExcThread(monitor, started 139976574482176)>']
[2026-02-26 03:15:12] 2026-02-26 02:15:01,449 | INFO     | all workflow threads have been joined
[2026-02-26 03:15:12] 2026-02-26 02:15:01,450 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-26 03:15:12] 2026-02-26 02:15:01,450 | INFO     | traces error code: 0
[2026-02-26 03:15:12] 2026-02-26 02:15:01,451 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-26 03:15:12] 2026-02-26 02:15:12,323 | INFO     | PID=400599 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-26 03:15:12] 2026-02-26 02:15:12,323 | INFO     | found 0 job(s) in 20 queues
[2026-02-26 03:15:12] 2026-02-26 02:15:12,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-26 03:15:12] 2026-02-26 02:15:12,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-26 03:15:12] 2026-02-26 02:15:12,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-26 03:15:12] 2026-02-26 02:15:12,323 | INFO     | [monitor] control thread has ended
[2026-02-26 03:15:12] 2026-02-26 02:15:12,368 [wrapper] ==== pilot stdout END ====
[2026-02-26 03:15:12] 2026-02-26 02:15:12,371 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-26 03:15:12] 2026-02-26 02:15:12,373 [wrapper] pilotpid: 400599
[2026-02-26 03:15:12] 2026-02-26 02:15:12,376 [wrapper] Pilot exit status: 0
[2026-02-26 03:15:12] 2026-02-26 02:15:12,384 [wrapper] pandaids: 7030293209
[2026-02-26 03:15:12] 2026-02-26 02:15:12,401 [wrapper] cleanup supervisor_pilot  410492 400600
[2026-02-26 03:15:12] 2026-02-26 02:15:12,404 [wrapper] Test setup, not cleaning
[2026-02-26 03:15:12] 2026-02-26 02:15:12,407 [wrapper] apfmon messages muted
[2026-02-26 03:15:12] 2026-02-26 02:15:12,410 [wrapper] ==== wrapper stdout END ====
[2026-02-26 03:15:12] 2026-02-26 02:15:12,413 [wrapper] ==== wrapper stderr END ====
[2026-02-26 03:15:12]  *** Error codes and diagnostics ***
[2026-02-26 03:15:12]     "exeErrorCode": 0,
[2026-02-26 03:15:12]     "exeErrorDiag": "",
[2026-02-26 03:15:12]     "pilotErrorCode": 0,
[2026-02-26 03:15:12]     "pilotErrorDiag": "",
[2026-02-26 03:15:12]  *** Listing of results directory ***
[2026-02-26 03:15:12] total 474720
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc    584627 Feb 25 16:36 pilot3.tar.gz
[2026-02-26 03:15:12] -rwx------ 1 boinc boinc     36322 Feb 25 16:38 runpilot2-wrapper.sh
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc      5111 Feb 25 16:41 queuedata.json
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc       100 Feb 26 01:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-26 03:15:12] -rwxr-xr-x 1 boinc boinc      7986 Feb 26 01:29 run_atlas
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc       105 Feb 26 01:29 job.xml
[2026-02-26 03:15:12] -rw-r--r-- 2 boinc boinc 272957729 Feb 26 01:29 EVNT.48343779._000001.pool.root.1
[2026-02-26 03:15:12] -rw-r--r-- 2 boinc boinc    597968 Feb 26 01:29 input.tar.gz
[2026-02-26 03:15:12] -rw-r--r-- 2 boinc boinc     15845 Feb 26 01:29 start_atlas.sh
[2026-02-26 03:15:12] drwxrwx--x 2 boinc boinc      4096 Feb 26 01:29 shared
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc         0 Feb 26 01:29 boinc_setup_complete
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc      6199 Feb 26 01:29 init_data.xml
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc         0 Feb 26 01:29 boinc_lockfile
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc      2574 Feb 26 01:29 pandaJob.out
[2026-02-26 03:15:12] -rw------- 1 boinc boinc    997624 Feb 26 01:29 agis_schedconf.cvmfs.json
[2026-02-26 03:15:12] -rw------- 1 boinc boinc   1513015 Feb 26 01:29 agis_ddmendpoints.agis.ALL.json
[2026-02-26 03:15:12] -rw------- 1 boinc boinc       430 Feb 26 01:29 workernode_map.json
[2026-02-26 03:15:12] drwx------ 5 boinc boinc      4096 Feb 26 01:29 pilot3
[2026-02-26 03:15:12] -rw------- 1 boinc boinc 206873760 Feb 26 03:14 HITS.48838610._000014.pool.root.1
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc       529 Feb 26 03:14 boinc_task_state.xml
[2026-02-26 03:15:12] -rw------- 1 boinc boinc      1015 Feb 26 03:14 memory_monitor_summary.json
[2026-02-26 03:15:12] -rw------- 1 boinc boinc    274317 Feb 26 03:14 log.48838610._000014.job.log.tgz.1
[2026-02-26 03:15:12] -rw------- 1 boinc boinc      6311 Feb 26 03:14 heartbeat.json
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc      8192 Feb 26 03:14 boinc_mmap_file
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc        27 Feb 26 03:14 wrapper_checkpoint.txt
[2026-02-26 03:15:12] -rw------- 1 boinc boinc       746 Feb 26 03:15 pilotlog.txt
[2026-02-26 03:15:12] -rw------- 1 boinc boinc        95 Feb 26 03:15 pilot_heartbeat.json
[2026-02-26 03:15:12] -rw------- 1 boinc boinc    909545 Feb 26 03:15 log.48838610._000014.job.log.1
[2026-02-26 03:15:12] -rw------- 1 boinc boinc       357 Feb 26 03:15 output.list
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc       620 Feb 26 03:15 runtime_log
[2026-02-26 03:15:12] -rw------- 1 boinc boinc   1198080 Feb 26 03:15 result.tar.gz
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc      8916 Feb 26 03:15 runtime_log.err
[2026-02-26 03:15:12] -rw------- 1 boinc boinc       661 Feb 26 03:15 fXIMDmi9VF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmaZ0KDmtaHxBo.diag
[2026-02-26 03:15:12] -rw-r--r-- 1 boinc boinc     10168 Feb 26 03:15 stderr.txt
[2026-02-26 03:15:12] HITS file was successfully produced:
[2026-02-26 03:15:12] -rw------- 1 boinc boinc 206873760 Feb 26 03:14 shared/HITS.pool.root.1
[2026-02-26 03:15:12]  *** Contents of shared directory: ***
[2026-02-26 03:15:12] total 470372
[2026-02-26 03:15:12] -rw-r--r-- 2 boinc boinc 272957729 Feb 26 01:29 ATLAS.root_0
[2026-02-26 03:15:12] -rw-r--r-- 2 boinc boinc    597968 Feb 26 01:29 input.tar.gz
[2026-02-26 03:15:12] -rw-r--r-- 2 boinc boinc     15845 Feb 26 01:29 start_atlas.sh
[2026-02-26 03:15:12] -rw------- 1 boinc boinc 206873760 Feb 26 03:14 HITS.pool.root.1
[2026-02-26 03:15:12] -rw------- 1 boinc boinc   1198080 Feb 26 03:15 result.tar.gz
03:15:14 (396552): run_atlas exited; CPU time 18060.976106
03:15:14 (396552): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN