Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:47:57 (811519): wrapper (7.7.26015): starting
09:47:57 (811519): wrapper: running run_atlas (--nthreads 12)
[2026-02-25 09:47:57] Arguments: --nthreads 12
[2026-02-25 09:47:57] Threads: 12
[2026-02-25 09:47:57] Checking for CVMFS
[2026-02-25 09:47:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-25 09:47:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-25 09:47:58] Running cvmfs_config stat atlas.cern.ch
[2026-02-25 09:47:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-25 09:47:58] 2.11.5.0 3590583 159702 232488 156621 1 371 36412879 45568001 21273 130560 0 1462036660 99.809 842037663 21886 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-25 09:47:58] CVMFS is ok
[2026-02-25 09:47:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-25 09:47:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-25 09:47:58] Further information can be found at the LHC@home message board.
[2026-02-25 09:47:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-25 09:47:58] Checking for apptainer binary...
[2026-02-25 09:47:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-25 09:47:58] Running /usr/bin/apptainer --version
[2026-02-25 09:47:59] apptainer version 1.4.1-1.el9
[2026-02-25 09:47:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-25 09:47:59] wns0047.triumf.lcg
[2026-02-25 09:47:59] apptainer works
[2026-02-25 09:47:59] Set ATHENA_PROC_NUMBER=12
[2026-02-25 09:47:59] Set ATHENA_CORE_NUMBER=12
[2026-02-25 09:47:59] Starting ATLAS job with PandaID=7030275482
[2026-02-25 09:47:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-25 09:52:53]  *** The last 200 lines of the pilot log: ***
[2026-02-25 09:52:54] 2026-02-25 17:51:50,724 | INFO     | will not add max space = 0 B to job metrics
[2026-02-25 09:52:54] 2026-02-25 17:51:50,757 | WARNING  | wrong length of table data, x=[1772041763.0], y=[1334.0] (must be same and length>=4)
[2026-02-25 09:52:54] 2026-02-25 17:51:50,757 | INFO     | could have reported an average CPU frequency of 2637 MHz (4 samples)
[2026-02-25 09:52:54] 2026-02-25 17:51:50,757 | INFO     | ..............................
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . Timing measurements:
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . get job = 0 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . initial setup = 17 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . payload setup = 13 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . stage-in = 0 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . payload execution = 39 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . stage-out = 1 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . log creation = 0 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | ..............................
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030275482/pilotlog.txt
[2026-02-25 09:52:54] 2026-02-25 17:51:50,892 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-25 09:52:54] - Log from pilotlog.txt -
[2026-02-25 09:52:54] 2026-02-25 17:51:50,723 | INFO     | extracted standard memory fields from prmon json
[2026-02-25 09:52:54] 2026-02-25 17:51:50,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-25 09:52:54] 2026-02-25 17:51:50,723 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 09:52:54] 2026-02-25 17:51:50,723 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 09:52:54] 2026-02-25 17:51:50,724 | WARNING  | found no stored workdir sizes
[2026-02-25 09:52:54] 2026-02-25 17:51:50,724 | INFO     | will not add max space = 0 B to job metrics
[2026-02-25 09:52:54] 2026-02-25 17:51:50,757 | WARNING  | wrong length of table data, x=[1772041763.0], y=[1334.0] (must be same and length>=4)
[2026-02-25 09:52:54] 2026-02-25 17:51:50,757 | INFO     | could have reported an average CPU frequency of 2637 MHz (4 samples)
[2026-02-25 09:52:54] 2026-02-25 17:51:50,757 | INFO     | ..............................
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . Timing measurements:
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . get job = 0 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . initial setup = 17 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . payload setup = 13 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . stage-in = 0 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . payload execution = 39 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . stage-out = 1 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . log creation = 0 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | ..............................
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030275482/pilotlog.txt
[2026-02-25 09:52:54] 2026-02-25 17:51:50,892 | WARNING  | 
[2026-02-25 09:52:54] [begin log extracts]
[2026-02-25 09:52:54] - Log from pilotlog.txt -
[2026-02-25 09:52:54] 2026-02-25 17:51:50,723 | INFO     | extracted standard memory fields from prmon json
[2026-02-25 09:52:54] 2026-02-25 17:51:50,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-25 09:52:54] 2026-02-25 17:51:50,723 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 09:52:54] 2026-02-25 17:51:50,723 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 09:52:54] 2026-02-25 17:51:50,724 | WARNING  | found no stored workdir sizes
[2026-02-25 09:52:54] 2026-02-25 17:51:50,724 | INFO     | will not add max space = 0 B to job metrics
[2026-02-25 09:52:54] 2026-02-25 17:51:50,757 | WARNING  | wrong length of table data, x=[1772041763.0], y=[1334.0] (must be same and length>=4)
[2026-02-25 09:52:54] 2026-02-25 17:51:50,757 | INFO     | could have reported an average CPU frequency of 2637 MHz (4 samples)
[2026-02-25 09:52:54] 2026-02-25 17:51:50,757 | INFO     | ..............................
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . Timing measurements:
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . get job = 0 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . initial setup = 17 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . payload setup = 13 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . stage-in = 0 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . payload execution = 39 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . stage-out = 1 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | . log creation = 0 s
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | ..............................
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-25 09:52:54] 2026-02-25 17:51:50,758 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7030275482/pilotlog.txt
[2026-02-25 09:52:54] [end log extracts]
[2026-02-25 09:52:54] 2026-02-25 17:51:50,892 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-25 09:52:54] 2026-02-25 17:51:50,893 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-25 09:52:54] 2026-02-25 17:51:51,164 | INFO     | 
[2026-02-25 09:52:54] 2026-02-25 17:51:51,164 | INFO     | job summary report
[2026-02-25 09:52:54] 2026-02-25 17:51:51,164 | INFO     | --------------------------------------------------
[2026-02-25 09:52:54] 2026-02-25 17:51:51,164 | INFO     | PanDA job id: 7030275482
[2026-02-25 09:52:54] 2026-02-25 17:51:51,164 | INFO     | task id: 48838416
[2026-02-25 09:52:54] 2026-02-25 17:51:51,164 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-25 09:49:37,134 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-25 09:52:54] 2026-02-25 17:51:51,164 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-25 09:52:54] 2026-02-25 17:51:51,164 | INFO     | pilot state: failed 
[2026-02-25 09:52:54] 2026-02-25 17:51:51,164 | INFO     | transexitcode: 65
[2026-02-25 09:52:54] 2026-02-25 17:51:51,164 | INFO     | exeerrorcode: 65
[2026-02-25 09:52:54] 2026-02-25 17:51:51,164 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | exitcode: 65
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | cpuconsumptiontime: 13 s
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | nevents: 0
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | neventsw: 0
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | pid: 819800
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | pgrp: 819800
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | corecount: 12
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | event service: False
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | sizes: {0: 2258411, 1: 2282305, 58: 2305555, 59: 2305531, 62: 2309851, 64: 2309879, 183: 2310201}
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | --------------------------------------------------
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | 
[2026-02-25 09:52:54] 2026-02-25 17:51:51,165 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-25 09:52:54] 2026-02-25 17:51:51,183 | INFO     | PID=815279 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-25 09:52:54] 2026-02-25 17:51:51,183 | INFO     | .. there are 28 such processes running
[2026-02-25 09:52:54] 2026-02-25 17:51:51,191 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,191 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,191 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,191 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,191 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | job 7030275482 has completed (purged errors)
[2026-02-25 09:52:54] 2026-02-25 17:51:51,192 | INFO     | overall cleanup function is called
[2026-02-25 09:52:54] 2026-02-25 17:51:52,201 | INFO     | --- collectZombieJob: --- 10, [819800]
[2026-02-25 09:52:54] 2026-02-25 17:51:52,201 | INFO     | zombie collector waiting for pid 819800
[2026-02-25 09:52:54] 2026-02-25 17:51:52,202 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-25 09:52:54] 2026-02-25 17:51:52,202 | INFO     | collected zombie processes
[2026-02-25 09:52:54] 2026-02-25 17:51:52,202 | INFO     | will attempt to kill all subprocesses of pid=819800
[2026-02-25 09:52:54] 2026-02-25 17:51:52,966 | INFO     | process IDs to be killed: [819800] (in reverse order)
[2026-02-25 09:52:54] 2026-02-25 17:51:53,347 | WARNING  | found no corresponding commands to process id(s)
[2026-02-25 09:52:54] 2026-02-25 17:51:53,350 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-25 09:52:54] 2026-02-25 17:51:53,408 | INFO     | did not find any defunct processes belonging to 819800
[2026-02-25 09:52:54] 2026-02-25 17:51:53,416 | INFO     | did not find any defunct processes belonging to 819800
[2026-02-25 09:52:54] 2026-02-25 17:51:53,416 | INFO     | ready for new job
[2026-02-25 09:52:54] 2026-02-25 17:51:53,417 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-25 09:52:54] 2026-02-25 17:51:53,418 | INFO     | **************************************
[2026-02-25 09:52:54] 2026-02-25 17:51:53,418 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-25 09:52:54] 2026-02-25 17:51:53,418 | INFO     | **************************************
[2026-02-25 09:52:54] 2026-02-25 17:51:53,418 | INFO     | 
[2026-02-25 09:52:54] 2026-02-25 17:51:53,420 | INFO     | architecture information:
[2026-02-25 09:52:54] 2026-02-25 17:51:53,420 | INFO     | executing command: cat /etc/os-release
[2026-02-25 09:52:54] 2026-02-25 17:51:53,432 | INFO     | cat /etc/os-release:
[2026-02-25 09:52:54] NAME="CentOS Linux"
[2026-02-25 09:52:54] VERSION="7 (Core)"
[2026-02-25 09:52:54] ID="centos"
[2026-02-25 09:52:54] ID_LIKE="rhel fedora"
[2026-02-25 09:52:54] VERSION_ID="7"
[2026-02-25 09:52:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-25 09:52:54] ANSI_COLOR="0;31"
[2026-02-25 09:52:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-25 09:52:54] HOME_URL="https://www.centos.org/"
[2026-02-25 09:52:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-25 09:52:54] 
[2026-02-25 09:52:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-25 09:52:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-25 09:52:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-25 09:52:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-25 09:52:54] 
[2026-02-25 09:52:54] 2026-02-25 17:51:53,432 | INFO     | **************************************
[2026-02-25 09:52:54] 2026-02-25 17:51:53,938 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-25 09:52:54] 2026-02-25 17:51:54,035 | INFO     | sufficient remaining disk space (2091336597504 B)
[2026-02-25 09:52:54] 2026-02-25 17:51:54,036 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-25 09:52:54] 2026-02-25 17:51:54,036 | INFO     | current server update state: UPDATING_FINAL
[2026-02-25 09:52:54] 2026-02-25 17:51:54,036 | INFO     | update_server=False
[2026-02-25 09:52:54] 2026-02-25 17:51:54,036 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-25 09:52:54] 2026-02-25 17:51:54,037 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-25 09:52:54] 2026-02-25 17:51:54,142 | INFO     | all job control threads have been joined
[2026-02-25 09:52:54] 2026-02-25 17:51:54,433 | INFO     | all payload control threads have been joined
[2026-02-25 09:52:54] 2026-02-25 17:51:54,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-25 09:52:54] 2026-02-25 17:51:54,722 | INFO     | aborting loop
[2026-02-25 09:52:54] 2026-02-25 17:51:55,042 | INFO     | [job] retrieve thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:55,045 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:55,050 | INFO     | all data control threads have been joined
[2026-02-25 09:52:54] 2026-02-25 17:51:55,148 | INFO     | [job] control thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:55,396 | INFO     | [payload] execute_payloads thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:55,397 | INFO     | [job] validate thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:55,450 | INFO     | [payload] control thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:55,454 | INFO     | [payload] failed_post thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:55,521 | INFO     | [job] create_data_payload thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:55,729 | INFO     | [job] job monitor thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:55,806 | INFO     | [payload] validate_post thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:55,814 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-25 09:52:54] 2026-02-25 17:51:55,942 | INFO     | [payload] validate_pre thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:56,044 | INFO     | [data] copytool_out thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:56,056 | INFO     | [data] control thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:56,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-25 09:52:54] 2026-02-25 17:51:56,148 | INFO     | [data] copytool_in thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:57,150 | INFO     | [job] queue monitor thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:51:59,823 | INFO     | [data] queue_monitor thread has finished
[2026-02-25 09:52:54] 2026-02-25 17:52:23,478 | INFO     | PID=815279 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-25 09:52:54] 2026-02-25 17:52:23,478 | INFO     | .. there are 28 such processes running
[2026-02-25 09:52:54] 2026-02-25 17:52:23,478 | INFO     | found 0 job(s) in 20 queues
[2026-02-25 09:52:54] 2026-02-25 17:52:23,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-25 09:52:54] 2026-02-25 17:52:23,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-25 09:52:54] 2026-02-25 17:52:46,382 | INFO     | [monitor] cgroup control has ended
[2026-02-25 09:52:54] 2026-02-25 17:52:48,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140026697889600)>', '<ExcThread(monitor, started 140026285364992)>']
[2026-02-25 09:52:54] 2026-02-25 17:52:48,626 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-25 09:52:54] 2026-02-25 17:52:48,626 | INFO     | [monitor] control thread has ended
[2026-02-25 09:52:54] 2026-02-25 17:52:53,069 | INFO     | all workflow threads have been joined
[2026-02-25 09:52:54] 2026-02-25 17:52:53,069 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-25 09:52:54] 2026-02-25 17:52:53,069 | INFO     | traces error code: 0
[2026-02-25 09:52:54] 2026-02-25 17:52:53,070 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-25 09:52:54] 2026-02-25 17:52:53,571 [wrapper] ==== pilot stdout END ====
[2026-02-25 09:52:54] 2026-02-25 17:52:53,594 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-25 09:52:54] 2026-02-25 17:52:53,596 [wrapper] pilotpid: 815279
[2026-02-25 09:52:54] 2026-02-25 17:52:53,598 [wrapper] Pilot exit status: 0
[2026-02-25 09:52:54] 2026-02-25 17:52:53,639 [wrapper] pandaids: 7030275482
[2026-02-25 09:52:54] 2026-02-25 17:52:53,681 [wrapper] cleanup supervisor_pilot  815285 815280
[2026-02-25 09:52:54] 2026-02-25 17:52:53,683 [wrapper] Test setup, not cleaning
[2026-02-25 09:52:54] 2026-02-25 17:52:53,685 [wrapper] apfmon messages muted
[2026-02-25 09:52:54] 2026-02-25 17:52:53,687 [wrapper] ==== wrapper stdout END ====
[2026-02-25 09:52:54] 2026-02-25 17:52:53,688 [wrapper] ==== wrapper stderr END ====
[2026-02-25 09:52:54]  *** Error codes and diagnostics ***
[2026-02-25 09:52:54]     "exeErrorCode": 65,
[2026-02-25 09:52:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-25 09:52:54]     "pilotErrorCode": 1305,
[2026-02-25 09:52:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-25 09:52:54]  *** Listing of results directory ***
[2026-02-25 09:52:54] total 288312
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc    584627 Feb 25 05:38 pilot3.tar.gz
[2026-02-25 09:52:54] -rwx------. 1 boinc boinc     36322 Feb 25 05:40 runpilot2-wrapper.sh
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc      5111 Feb 25 05:41 queuedata.json
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc       100 Feb 25 09:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-25 09:52:54] -rwxr-xr-x. 1 boinc boinc      7986 Feb 25 09:47 run_atlas
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc       105 Feb 25 09:47 job.xml
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc      6594 Feb 25 09:47 init_data.xml
[2026-02-25 09:52:54] -rw-r--r--. 2 boinc boinc 291101528 Feb 25 09:47 EVNT.48220085._000117.pool.root.1
[2026-02-25 09:52:54] -rw-r--r--. 2 boinc boinc     15845 Feb 25 09:47 start_atlas.sh
[2026-02-25 09:52:54] drwxrwx--x. 2 boinc boinc      4096 Feb 25 09:47 shared
[2026-02-25 09:52:54] -rw-r--r--. 2 boinc boinc    597961 Feb 25 09:47 input.tar.gz
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc         0 Feb 25 09:47 boinc_lockfile
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc      2568 Feb 25 09:47 pandaJob.out
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc    995720 Feb 25 09:48 agis_schedconf.cvmfs.json
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc   1513015 Feb 25 09:48 agis_ddmendpoints.agis.ALL.json
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc       445 Feb 25 09:48 workernode_map.json
[2026-02-25 09:52:54] drwx------. 5 boinc boinc      4096 Feb 25 09:48 pilot3
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc       959 Feb 25 09:49 memory_monitor_summary.json
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc     21187 Feb 25 09:49 log.48838416._002858.job.log.tgz.1
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc        95 Feb 25 09:51 pilot_heartbeat.json
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc      6983 Feb 25 09:51 heartbeat.json
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc       524 Feb 25 09:52 boinc_task_state.xml
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc      8192 Feb 25 09:52 boinc_mmap_file
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc        22 Feb 25 09:52 wrapper_checkpoint.txt
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc      4818 Feb 25 09:52 pilotlog.txt
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc     83924 Feb 25 09:52 log.48838416._002858.job.log.1
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc       188 Feb 25 09:52 output.list
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc       620 Feb 25 09:52 runtime_log
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc    122880 Feb 25 09:52 result.tar.gz
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc      8635 Feb 25 09:52 runtime_log.err
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc       643 Feb 25 09:52 mhWKDm0IUF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmvJ0KDm1jguqn.diag
[2026-02-25 09:52:54] -rw-r--r--. 1 boinc boinc     21700 Feb 25 09:52 stderr.txt
[2026-02-25 09:52:54] No HITS result produced
[2026-02-25 09:52:54]  *** Contents of shared directory: ***
[2026-02-25 09:52:54] total 285000
[2026-02-25 09:52:54] -rw-r--r--. 2 boinc boinc 291101528 Feb 25 09:47 ATLAS.root_0
[2026-02-25 09:52:54] -rw-r--r--. 2 boinc boinc     15845 Feb 25 09:47 start_atlas.sh
[2026-02-25 09:52:54] -rw-r--r--. 2 boinc boinc    597961 Feb 25 09:47 input.tar.gz
[2026-02-25 09:52:54] -rw-------. 1 boinc boinc    122880 Feb 25 09:52 result.tar.gz
09:52:55 (811519): run_atlas exited; CPU time 20.087839
09:52:55 (811519): called boinc_finish(0)

</stderr_txt>
]]>

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