Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:10:05 (319129): wrapper (7.7.26015): starting
14:10:05 (319129): wrapper: running run_atlas (--nthreads 9)
[2026-02-25 14:10:05] Arguments: --nthreads 9
[2026-02-25 14:10:05] Threads: 9
[2026-02-25 14:10:05] Checking for CVMFS
[2026-02-25 14:10:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-25 14:10:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-25 14:10:07] Running cvmfs_config stat atlas.cern.ch
[2026-02-25 14:10:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-25 14:10:08] 2.13.3.0 10021 89594 146708 156624 3 17 23431000 39288832 9069 16776704 0 49298234 99.530 64915795 38674 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-25 14:10:08] CVMFS is ok
[2026-02-25 14:10:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-25 14:10:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-25 14:10:08] Further information can be found at the LHC@home message board.
[2026-02-25 14:10:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-25 14:10:08] Checking for apptainer binary...
[2026-02-25 14:10:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-25 14:10:08] Running /usr/bin/apptainer --version
[2026-02-25 14:10:09] apptainer version 1.4.5-2.el9
[2026-02-25 14:10:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-25 14:10:10] c-211-4.aglt2.org
[2026-02-25 14:10:10] apptainer works
[2026-02-25 14:10:10] Set ATHENA_PROC_NUMBER=9
[2026-02-25 14:10:10] Set ATHENA_CORE_NUMBER=9
[2026-02-25 14:10:11] Starting ATLAS job with PandaID=7030263374
[2026-02-25 14:10:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-25 23:03:05]  *** The last 200 lines of the pilot log: ***
[2026-02-25 23:03:05] 2026-02-26 04:01:56,849 | INFO     | total number of processed events: 400 (read)
[2026-02-25 23:03:05] 2026-02-26 04:01:56,886 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7030263374/memory_monitor_summary.json (trf name=prmon)
[2026-02-25 23:03:05] 2026-02-26 04:01:56,887 | INFO     | extracted standard info from prmon json
[2026-02-25 23:03:05] 2026-02-26 04:01:56,887 | INFO     | extracted standard memory fields from prmon json
[2026-02-25 23:03:05] 2026-02-26 04:01:56,887 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-25 23:03:05] 2026-02-26 04:01:56,888 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 23:03:05] 2026-02-26 04:01:56,888 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 23:03:05] 2026-02-26 04:01:57,025 | INFO     | fitting pss+swap vs Time
[2026-02-25 23:03:05] 2026-02-26 04:01:57,026 | INFO     | sum of square deviations: 43097106968.834175
[2026-02-25 23:03:05] 2026-02-26 04:01:57,079 | INFO     | sum of deviations: 262842555282.2358
[2026-02-25 23:03:05] 2026-02-26 04:01:57,079 | INFO     | mean x: 1772062675.6563706
[2026-02-25 23:03:05] 2026-02-26 04:01:57,129 | INFO     | mean y: 2566258.2316602315
[2026-02-25 23:03:05] 2026-02-26 04:01:57,129 | INFO     | intersect: -10804968505.682354
[2026-02-25 23:03:05] 2026-02-26 04:01:57,130 | INFO     | chi2: 5.475963190263629
[2026-02-25 23:03:05] 2026-02-26 04:01:57,131 | INFO     | sum of square deviations: 41861225460.91608
[2026-02-25 23:03:05] 2026-02-26 04:01:57,238 | INFO     | sum of deviations: 293842300485.52435
[2026-02-25 23:03:05] 2026-02-26 04:01:57,238 | INFO     | mean x: 1772062523.165692
[2026-02-25 23:03:05] 2026-02-26 04:01:57,238 | INFO     | mean y: 2570050.382066277
[2026-02-25 23:03:05] 2026-02-26 04:01:57,239 | INFO     | intersect: -12436313968.848333
[2026-02-25 23:03:05] 2026-02-26 04:01:57,239 | INFO     | chi2: 4.792950857871001
[2026-02-25 23:03:05] 2026-02-26 04:01:57,240 | INFO     | current chi2=4.792950857871001 (change=12.47291679401785 %)
[2026-02-25 23:03:05] 2026-02-26 04:01:57,273 | INFO     | right removable region: 512
[2026-02-25 23:03:05] 2026-02-26 04:01:57,274 | INFO     | sum of square deviations: 41860923388.9161
[2026-02-25 23:03:05] 2026-02-26 04:01:57,327 | INFO     | sum of deviations: 103020926356.36264
[2026-02-25 23:03:05] 2026-02-26 04:01:57,327 | INFO     | mean x: 1772062828.165692
[2026-02-25 23:03:05] 2026-02-26 04:01:57,327 | INFO     | mean y: 2585957.7251461986
[2026-02-25 23:03:05] 2026-02-26 04:01:57,327 | INFO     | intersect: -4358511202.583635
[2026-02-25 23:03:05] 2026-02-26 04:01:57,328 | INFO     | chi2: 2.1620783560128993
[2026-02-25 23:03:05] 2026-02-26 04:01:57,328 | INFO     | current chi2=2.1620783560128993 (change=60.51693043048358 %)
[2026-02-25 23:03:05] 2026-02-26 04:01:57,329 | INFO     | sum of square deviations: 40648694358.4409
[2026-02-25 23:03:05] 2026-02-26 04:01:57,387 | INFO     | monitor loop #1906: job 0:7030263374 is in state 'finished'
[2026-02-25 23:03:05] 2026-02-26 04:01:57,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-25 23:03:05] 2026-02-26 04:01:57,414 | INFO     | sum of deviations: 13432151717.787384
[2026-02-25 23:03:05] 2026-02-26 04:01:57,414 | INFO     | mean x: 1772062980.6692913
[2026-02-25 23:03:05] 2026-02-26 04:01:57,414 | INFO     | mean y: 2597212.909448819
[2026-02-25 23:03:05] 2026-02-26 04:01:57,415 | INFO     | intersect: -582971873.2691265
[2026-02-25 23:03:05] 2026-02-26 04:01:57,415 | INFO     | chi2: 1.1159019492939706
[2026-02-25 23:03:05] 2026-02-26 04:01:57,415 | INFO     | current chi2=1.1159019492939706 (change=48.38753432822798 %)
[2026-02-25 23:03:05] 2026-02-26 04:01:57,416 | INFO     | sum of square deviations: 39460217875.30398
[2026-02-25 23:03:05] 2026-02-26 04:01:57,501 | INFO     | sum of deviations: -20995453905.39762
[2026-02-25 23:03:05] 2026-02-26 04:01:57,502 | INFO     | mean x: 1772063133.16501
[2026-02-25 23:03:05] 2026-02-26 04:01:57,502 | INFO     | mean y: 2601628.522862823
[2026-02-25 23:03:05] 2026-02-26 04:01:57,502 | INFO     | intersect: 945456783.2356609
[2026-02-25 23:03:05] 2026-02-26 04:01:57,529 | INFO     | chi2: 0.9662110440425333
[2026-02-25 23:03:05] 2026-02-26 04:01:57,529 | INFO     | current chi2=0.9662110440425333 (change=13.414342124426474 %)
[2026-02-25 23:03:05] 2026-02-26 04:01:57,529 | INFO     | left removable region: 30
[2026-02-25 23:03:05] 2026-02-26 04:01:57,530 | INFO     | sum of square deviations: 34721031632.93979
[2026-02-25 23:03:05] 2026-02-26 04:01:57,589 | INFO     | sum of deviations: -9197653129.89418
[2026-02-25 23:03:05] 2026-02-26 04:01:57,589 | INFO     | mean x: 1772063407.6908715
[2026-02-25 23:03:05] 2026-02-26 04:01:57,589 | INFO     | mean y: 2608685.8195020747
[2026-02-25 23:03:05] 2026-02-26 04:01:57,589 | INFO     | intersect: 472030928.8111597
[2026-02-25 23:03:05] 2026-02-26 04:01:57,590 | INFO     | chi2: 0.2218056506443186
[2026-02-25 23:03:05] 2026-02-26 04:01:57,590 | INFO     | current memory leak: -0.26 B/s (using 482 data points, chi2=0.22)
[2026-02-25 23:03:05] 2026-02-26 04:01:57,591 | INFO     | could have reported an average CPU frequency of 2599 MHz (21 samples)
[2026-02-25 23:03:05] 2026-02-26 04:01:57,591 | INFO     | ..............................
[2026-02-25 23:03:05] 2026-02-26 04:01:57,592 | INFO     | . Timing measurements:
[2026-02-25 23:03:05] 2026-02-26 04:01:57,624 | INFO     | . get job = 0 s
[2026-02-25 23:03:05] 2026-02-26 04:01:57,624 | INFO     | . initial setup = 59 s
[2026-02-25 23:03:05] 2026-02-26 04:01:57,624 | INFO     | . payload setup = 70 s
[2026-02-25 23:03:05] 2026-02-26 04:01:57,624 | INFO     | . stage-in = 1 s
[2026-02-25 23:03:05] 2026-02-26 04:01:57,624 | INFO     | . payload execution = 31636 s
[2026-02-25 23:03:05] 2026-02-26 04:01:57,625 | INFO     | . stage-out = 6 s
[2026-02-25 23:03:05] 2026-02-26 04:01:57,625 | INFO     | . log creation = 1 s
[2026-02-25 23:03:05] 2026-02-26 04:01:57,625 | INFO     | ..............................
[2026-02-25 23:03:05] 2026-02-26 04:01:58,452 | INFO     | time since job start (31744s) is within the limit (349056.0s)
[2026-02-25 23:03:05] 2026-02-26 04:01:58,514 | INFO     | 
[2026-02-25 23:03:05] 2026-02-26 04:01:58,514 | INFO     | job summary report
[2026-02-25 23:03:05] 2026-02-26 04:01:58,514 | INFO     | --------------------------------------------------
[2026-02-25 23:03:05] 2026-02-26 04:01:58,514 | INFO     | PanDA job id: 7030263374
[2026-02-25 23:03:05] 2026-02-26 04:01:58,515 | INFO     | task id: 48838591
[2026-02-25 23:03:05] 2026-02-26 04:01:58,515 | INFO     | errors: (none)
[2026-02-25 23:03:05] 2026-02-26 04:01:58,515 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-25 23:03:05] 2026-02-26 04:01:58,515 | INFO     | pilot state: finished 
[2026-02-25 23:03:05] 2026-02-26 04:01:58,515 | INFO     | transexitcode: 0
[2026-02-25 23:03:05] 2026-02-26 04:01:58,515 | INFO     | exeerrorcode: 0
[2026-02-25 23:03:05] 2026-02-26 04:01:58,515 | INFO     | exeerrordiag: 
[2026-02-25 23:03:05] 2026-02-26 04:01:58,515 | INFO     | exitcode: 0
[2026-02-25 23:03:05] 2026-02-26 04:01:58,515 | INFO     | exitmsg: OK
[2026-02-25 23:03:05] 2026-02-26 04:01:58,515 | INFO     | cpuconsumptiontime: 58776 s
[2026-02-25 23:03:05] 2026-02-26 04:01:58,516 | INFO     | nevents: 400
[2026-02-25 23:03:05] 2026-02-26 04:01:58,516 | INFO     | neventsw: 0
[2026-02-25 23:03:05] 2026-02-26 04:01:58,516 | INFO     | pid: 333563
[2026-02-25 23:03:05] 2026-02-26 04:01:58,516 | INFO     | pgrp: 333563
[2026-02-25 23:03:05] 2026-02-26 04:01:58,516 | INFO     | corecount: 9
[2026-02-25 23:03:05] 2026-02-26 04:01:58,516 | INFO     | event service: False
[2026-02-25 23:03:05] 2026-02-26 04:01:58,516 | INFO     | sizes: {0: 2281184, 1: 2281869, 2: 2281897, 4: 2281897, 6: 2282358, 7: 2282358, 19: 2282514, 31712: 2321115, 31713: 2321114, 31721: 2330196, 31722: 2330252, 31725:
[2026-02-25 23:03:05] 2026-02-26 04:01:58,516 | INFO     | --------------------------------------------------
[2026-02-25 23:03:05] 2026-02-26 04:01:58,516 | INFO     | 
[2026-02-25 23:03:05] 2026-02-26 04:01:58,516 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-25 23:03:05] 2026-02-26 04:01:58,586 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,586 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,587 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,587 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,587 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,587 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,587 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,587 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,587 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,587 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,588 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,588 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,588 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,588 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,588 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,588 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-25 23:03:05] 2026-02-26 04:01:58,588 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,589 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-25 23:03:05] 2026-02-26 04:01:58,589 | INFO     | job 7030263374 has completed (purged errors)
[2026-02-25 23:03:05] 2026-02-26 04:01:58,589 | INFO     | overall cleanup function is called
[2026-02-25 23:03:05] 2026-02-26 04:01:59,603 | INFO     | --- collectZombieJob: --- 10, [333563]
[2026-02-25 23:03:05] 2026-02-26 04:01:59,603 | INFO     | zombie collector waiting for pid 333563
[2026-02-25 23:03:05] 2026-02-26 04:01:59,603 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-25 23:03:05] 2026-02-26 04:01:59,603 | INFO     | collected zombie processes
[2026-02-25 23:03:05] 2026-02-26 04:01:59,603 | INFO     | will attempt to kill all subprocesses of pid=333563
[2026-02-25 23:03:05] 2026-02-26 04:02:03,149 | INFO     | process IDs to be killed: [333563] (in reverse order)
[2026-02-25 23:03:05] 2026-02-26 04:02:03,680 | WARNING  | found no corresponding commands to process id(s)
[2026-02-25 23:03:05] 2026-02-26 04:02:03,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-25 23:03:05] 2026-02-26 04:02:03,698 | INFO     | did not find any defunct processes belonging to 333563
[2026-02-25 23:03:05] 2026-02-26 04:02:03,716 | INFO     | did not find any defunct processes belonging to 333563
[2026-02-25 23:03:05] 2026-02-26 04:02:03,720 | INFO     | ready for new job
[2026-02-25 23:03:05] 2026-02-26 04:02:03,720 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-25 23:03:05] 2026-02-26 04:02:03,723 | INFO     | **************************************
[2026-02-25 23:03:05] 2026-02-26 04:02:03,723 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-25 23:03:05] 2026-02-26 04:02:03,724 | INFO     | **************************************
[2026-02-25 23:03:05] 2026-02-26 04:02:03,728 | INFO     | 
[2026-02-25 23:03:05] 2026-02-26 04:02:03,730 | INFO     | architecture information:
[2026-02-25 23:03:05] 2026-02-26 04:02:03,734 | INFO     | executing command: cat /etc/os-release
[2026-02-25 23:03:05] 2026-02-26 04:02:03,922 | INFO     | cat /etc/os-release:
[2026-02-25 23:03:05] NAME="CentOS Linux"
[2026-02-25 23:03:05] VERSION="7 (Core)"
[2026-02-25 23:03:05] ID="centos"
[2026-02-25 23:03:05] ID_LIKE="rhel fedora"
[2026-02-25 23:03:05] VERSION_ID="7"
[2026-02-25 23:03:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-25 23:03:05] ANSI_COLOR="0;31"
[2026-02-25 23:03:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-25 23:03:05] HOME_URL="https://www.centos.org/"
[2026-02-25 23:03:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-25 23:03:05] 
[2026-02-25 23:03:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-25 23:03:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-25 23:03:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-25 23:03:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-25 23:03:05] 
[2026-02-25 23:03:05] 2026-02-26 04:02:03,922 | INFO     | **************************************
[2026-02-25 23:03:05] 2026-02-26 04:02:04,436 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-25 23:03:05] 2026-02-26 04:02:04,483 | INFO     | sufficient remaining disk space (52703526912 B)
[2026-02-25 23:03:05] 2026-02-26 04:02:04,484 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-25 23:03:05] 2026-02-26 04:02:04,484 | INFO     | current server update state: UPDATING_FINAL
[2026-02-25 23:03:05] 2026-02-26 04:02:04,484 | INFO     | update_server=False
[2026-02-25 23:03:05] 2026-02-26 04:02:04,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-25 23:03:05] 2026-02-26 04:02:04,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-25 23:03:05] 2026-02-26 04:02:04,500 | INFO     | aborting loop
[2026-02-25 23:03:05] 2026-02-26 04:02:04,511 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-25 23:03:05] 2026-02-26 04:02:04,856 | INFO     | all data control threads have been joined
[2026-02-25 23:03:05] 2026-02-26 04:02:05,388 | INFO     | all payload control threads have been joined
[2026-02-25 23:03:05] 2026-02-26 04:02:05,491 | INFO     | [job] retrieve thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:05,538 | INFO     | [job] queue monitor thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:05,542 | INFO     | [job] job monitor thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:05,645 | INFO     | [payload] validate_pre thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:05,651 | INFO     | [payload] execute_payloads thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:05,694 | INFO     | [payload] failed_post thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:05,862 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:05,884 | INFO     | [data] control thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:05,980 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-25 23:03:05] 2026-02-26 04:02:06,006 | INFO     | [data] copytool_in thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:06,013 | INFO     | [job] validate thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:06,057 | INFO     | all job control threads have been joined
[2026-02-25 23:03:05] 2026-02-26 04:02:06,425 | INFO     | [payload] control thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:06,652 | INFO     | [payload] validate_post thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:06,738 | INFO     | [job] create_data_payload thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:06,745 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-25 23:03:05] 2026-02-26 04:02:07,063 | INFO     | [job] control thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:07,987 | INFO     | [data] copytool_out thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:10,792 | INFO     | [data] queue_monitor thread has finished
[2026-02-25 23:03:05] 2026-02-26 04:02:34,089 | INFO     | PID=326566 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-25 23:03:05] 2026-02-26 04:02:34,089 | INFO     | .. there are 7 such processes running
[2026-02-25 23:03:05] 2026-02-26 04:02:34,089 | INFO     | found 0 job(s) in 20 queues
[2026-02-25 23:03:05] 2026-02-26 04:02:34,089 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-25 23:03:05] 2026-02-26 04:02:34,089 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-25 23:03:05] 2026-02-26 04:02:54,225 | INFO     | [monitor] cgroup control has ended
[2026-02-25 23:03:05] 2026-02-26 04:02:55,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139633747539776)>', '<ExcThread(monitor, started 139633371358976)>']
[2026-02-25 23:03:05] 2026-02-26 04:02:56,421 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-25 23:03:05] 2026-02-26 04:02:56,421 | INFO     | [monitor] control thread has ended
[2026-02-25 23:03:05] 2026-02-26 04:03:00,464 | INFO     | all workflow threads have been joined
[2026-02-25 23:03:05] 2026-02-26 04:03:00,465 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-25 23:03:05] 2026-02-26 04:03:00,465 | INFO     | traces error code: 0
[2026-02-25 23:03:05] 2026-02-26 04:03:00,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-25 23:03:05] 2026-02-26 04:03:02,452 [wrapper] ==== pilot stdout END ====
[2026-02-25 23:03:05] 2026-02-26 04:03:02,503 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-25 23:03:05] 2026-02-26 04:03:02,547 [wrapper] pilotpid: 326566
[2026-02-25 23:03:05] 2026-02-26 04:03:02,590 [wrapper] Pilot exit status: 0
[2026-02-25 23:03:05] 2026-02-26 04:03:02,784 [wrapper] pandaids: 7030263374
[2026-02-25 23:03:05] 2026-02-26 04:03:03,510 [wrapper] cleanup supervisor_pilot 1115831 326567
[2026-02-25 23:03:05] 2026-02-26 04:03:03,526 [wrapper] Test setup, not cleaning
[2026-02-25 23:03:05] 2026-02-26 04:03:03,571 [wrapper] apfmon messages muted
[2026-02-25 23:03:05] 2026-02-26 04:03:03,668 [wrapper] ==== wrapper stdout END ====
[2026-02-25 23:03:05] 2026-02-26 04:03:03,754 [wrapper] ==== wrapper stderr END ====
[2026-02-25 23:03:05]  *** Error codes and diagnostics ***
[2026-02-25 23:03:05]     "exeErrorCode": 0,
[2026-02-25 23:03:05]     "exeErrorDiag": "",
[2026-02-25 23:03:05]     "pilotErrorCode": 0,
[2026-02-25 23:03:05]     "pilotErrorDiag": "",
[2026-02-25 23:03:05]  *** Listing of results directory ***
[2026-02-25 23:03:05] total 487104
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas    584627 Feb 25 08:22 pilot3.tar.gz
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas      5111 Feb 25 08:29 queuedata.json
[2026-02-25 23:03:05] -rwx------. 1 boincer umatlas     36322 Feb 25 08:29 runpilot2-wrapper.sh
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas       100 Feb 25 14:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-25 23:03:05] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 14:10 run_atlas
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas       105 Feb 25 14:10 job.xml
[2026-02-25 23:03:05] -rw-r--r--. 2 boincer umatlas 277832340 Feb 25 14:10 EVNT.48220229._000014.pool.root.1
[2026-02-25 23:03:05] -rw-r--r--. 2 boincer umatlas     15845 Feb 25 14:10 start_atlas.sh
[2026-02-25 23:03:05] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 14:10 shared
[2026-02-25 23:03:05] -rw-r--r--. 2 boincer umatlas    597958 Feb 25 14:10 input.tar.gz
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas         0 Feb 25 14:10 boinc_lockfile
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas      2565 Feb 25 14:10 pandaJob.out
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas        57 Feb 25 14:10 setup.sh.local
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas    995728 Feb 25 14:11 agis_schedconf.cvmfs.json
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas       433 Feb 25 14:12 workernode_map.json
[2026-02-25 23:03:05] drwx------. 5 boincer umatlas      4096 Feb 25 14:12 pilot3
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas      6660 Feb 25 22:56 init_data.xml
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas 207814656 Feb 25 23:00 HITS.48838591._000336.pool.root.1
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas       531 Feb 25 23:00 boinc_task_state.xml
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas      1050 Feb 25 23:01 memory_monitor_summary.json
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas        95 Feb 25 23:01 pilot_heartbeat.json
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas   1513015 Feb 25 23:01 agis_ddmendpoints.agis.ALL.json
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas    688936 Feb 25 23:01 log.48838591._000336.job.log.tgz.1
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas      6394 Feb 25 23:01 heartbeat.json
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas      4818 Feb 25 23:03 pilotlog.txt
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas        28 Feb 25 23:03 wrapper_checkpoint.txt
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 23:03 boinc_mmap_file
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas   3918996 Feb 25 23:03 log.48838591._000336.job.log.1
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas       357 Feb 25 23:03 output.list
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas       620 Feb 25 23:03 runtime_log
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas   4628480 Feb 25 23:03 result.tar.gz
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas      9337 Feb 25 23:03 runtime_log.err
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas       659 Feb 25 23:03 GR9KDmJ8TF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmILyKDm1TKYin.diag
[2026-02-25 23:03:05] -rw-r--r--. 1 boincer umatlas     20962 Feb 25 23:03 stderr.txt
[2026-02-25 23:03:05] HITS file was successfully produced:
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas 207814656 Feb 25 23:00 shared/HITS.pool.root.1
[2026-02-25 23:03:05]  *** Contents of shared directory: ***
[2026-02-25 23:03:05] total 479392
[2026-02-25 23:03:05] -rw-r--r--. 2 boincer umatlas 277832340 Feb 25 14:10 ATLAS.root_0
[2026-02-25 23:03:05] -rw-r--r--. 2 boincer umatlas     15845 Feb 25 14:10 start_atlas.sh
[2026-02-25 23:03:05] -rw-r--r--. 2 boincer umatlas    597958 Feb 25 14:10 input.tar.gz
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas 207814656 Feb 25 23:00 HITS.pool.root.1
[2026-02-25 23:03:05] -rw-------. 1 boincer umatlas   4628480 Feb 25 23:03 result.tar.gz
23:03:07 (319129): run_atlas exited; CPU time 59568.061059
23:03:07 (319129): called boinc_finish(0)

</stderr_txt>
]]>

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