Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-26 14:48:10 (42120): vboxwrapper version 26210
2026-02-26 14:48:10 (42120): BOINC client version: 8.2.4
2026-02-26 14:48:12 (42120): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2026-02-26 14:48:13 (42120): Successfully copied 'init_data.xml' to the shared directory.
2026-02-26 14:48:13 (42120): Create VM. (boinc_df294e15e2063739, slot#4)
2026-02-26 14:48:15 (42120): Setting Memory Size for VM. (4400MB)
2026-02-26 14:48:16 (42120): Setting CPU Count for VM. (4)
2026-02-26 14:48:16 (42120): Setting Chipset Options for VM.
2026-02-26 14:48:17 (42120): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-26 14:48:18 (42120): Setting Boot Options for VM.
2026-02-26 14:48:20 (42120): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-26 14:48:21 (42120): Enabling VM Network Access.
2026-02-26 14:48:22 (42120): Disabling USB Support for VM.
2026-02-26 14:48:22 (42120): Disabling COM Port Support for VM.
2026-02-26 14:48:23 (42120): Disabling LPT Port Support for VM.
2026-02-26 14:48:24 (42120): Disabling Audio Support for VM.
2026-02-26 14:48:25 (42120): Disabling Clipboard Support for VM.
2026-02-26 14:48:26 (42120): Disabling Drag and Drop Support for VM.
2026-02-26 14:48:26 (42120): Adding storage controller(s) to VM.
2026-02-26 14:48:27 (42120): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-26 14:48:29 (42120): Adding VirtualBox Guest Additions to VM.
2026-02-26 14:48:30 (42120): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-26 14:48:30 (42120): forwarding host port 55942 to guest port 80
2026-02-26 14:48:31 (42120): Enabling remote desktop for VM.
2026-02-26 14:48:33 (42120): Enabling shared directory for VM.
2026-02-26 14:48:38 (42120): Starting VM using VBoxManage interface. (boinc_df294e15e2063739, slot#4)
2026-02-26 14:48:52 (42120): Successfully started VM. (PID = '40828')
2026-02-26 14:48:52 (42120): Reporting VM Process ID to BOINC.
2026-02-26 14:48:58 (42120): Guest Log: BIOS: VirtualBox 7.1.8
2026-02-26 14:48:58 (42120): Guest Log: CPUID EDX: 0x178bfbff
2026-02-26 14:48:58 (42120): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-26 14:48:58 (42120): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-26 14:48:58 (42120): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-26 14:48:58 (42120): Guest Log: BIOS: Booting from Hard Disk...
2026-02-26 14:48:58 (42120): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-26 14:48:58 (42120): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-26 14:48:58 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-26 14:48:58 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-26 14:48:58 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-26 14:48:58 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-26 14:48:58 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-26 14:48:58 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-26 14:48:58 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-26 14:48:58 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-26 14:49:01 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-26 14:49:01 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-26 14:49:01 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-26 14:49:01 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-26 14:49:01 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-26 14:49:01 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-26 14:49:01 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-26 14:49:01 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-26 14:49:03 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-26 14:49:03 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-26 14:49:03 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-26 14:49:03 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-26 14:49:03 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-26 14:49:03 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-26 14:49:03 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-26 14:49:04 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-26 14:49:04 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-26 14:49:04 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-26 14:49:04 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-26 14:49:04 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-26 14:49:04 (42120): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-26 14:49:04 (42120): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-26 14:49:04 (42120): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-26 14:49:09 (42120): Detected: Web Application Enabled (http://localhost:55942)
2026-02-26 14:49:11 (42120): Detected: Remote Desktop Enabled (localhost:55943)
2026-02-26 14:49:11 (42120): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-26 14:49:11 (42120): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-26 14:49:11 (42120): Preference change detected
2026-02-26 14:49:11 (42120): Setting CPU throttle for VM. (100%)
2026-02-26 14:49:13 (42120): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-26 14:49:17 (42120): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-26 14:49:17 (42120): Guest Log: 00:00:00.000231 main     Log opened 2026-02-26T14:49:14.594297000Z
2026-02-26 14:49:17 (42120): Guest Log: 00:00:00.000421 main     OS Product: Linux
2026-02-26 14:49:17 (42120): Guest Log: 00:00:00.000475 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-26 14:49:17 (42120): Guest Log: 00:00:00.000520 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-26 14:49:17 (42120): Guest Log: 00:00:00.000564 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-26 14:49:17 (42120): Guest Log: 00:00:00.000565 main     Process ID: 1315
2026-02-26 14:49:17 (42120): Guest Log: 00:00:00.000566 main     Package type: LINUX_64BITS_GENERIC
2026-02-26 14:49:17 (42120): Guest Log: 00:00:00.001804 main     5.2.32 r132073 started. Verbose level = 0
2026-02-26 14:49:17 (42120): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-26 14:49:17 (42120): Guest Log: [INFO] Mounting shared directory
2026-02-26 14:49:17 (42120): Guest Log: [INFO] Checking for init_data.xml
2026-02-26 14:49:26 (42120): Guest Log: 00:00:10.027017 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 508 919 000ns (GuestNow=1 772 113 766 100 056 000 ns GuestLast=1 772 117 354 608 975 000 ns fSetTimeLastLoop=true )
2026-02-26 14:50:01 (42120): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-26 14:50:01 (42120): Guest Log: [INFO] Detected branch: prod
2026-02-26 14:50:07 (42120): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-26 14:50:07 (42120): Guest Log: Copying input files
2026-02-26 14:50:09 (42120): Guest Log: Copied input files into RunAtlas.
2026-02-26 14:50:09 (42120): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-26 14:50:09 (42120): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-26 14:50:10 (42120): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-26 14:50:10 (42120): Guest Log: Further information can be found at the LHC@home message board.
2026-02-26 14:50:36 (42120): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-26 14:50:42 (42120): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-26 14:50:42 (42120): Guest Log: 2.6.3.0 1596 0 32220 156656 3 1 3117743 4096001 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-26 14:50:42 (42120): Guest Log: copied the webapp to /var/www
2026-02-26 14:50:42 (42120): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-26 14:50:42 (42120): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-26 14:50:50 (42120): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-26 14:50:50 (42120): Guest Log:  *** Starting ATLAS job. (PandaID=7030255375 taskID=48838416) ***
2026-02-26 16:33:09 (42120): Status Report: Elapsed Time: '6001.646564'
2026-02-26 16:33:09 (42120): Status Report: CPU Time: '11639.156250'
2026-02-26 18:16:54 (42120): Status Report: Elapsed Time: '12002.059734'
2026-02-26 18:16:54 (42120): Status Report: CPU Time: '26188.140625'
2026-02-26 20:01:40 (42120): Status Report: Elapsed Time: '18002.281162'
2026-02-26 20:01:40 (42120): Status Report: CPU Time: '40946.187500'
2026-02-26 21:45:55 (42120): Status Report: Elapsed Time: '24003.250645'
2026-02-26 21:45:55 (42120): Status Report: CPU Time: '55595.281250'
2026-02-26 23:29:51 (42120): Status Report: Elapsed Time: '30003.303295'
2026-02-26 23:29:51 (42120): Status Report: CPU Time: '70195.640625'
2026-02-27 01:14:21 (42120): Status Report: Elapsed Time: '36003.955116'
2026-02-27 01:14:21 (42120): Status Report: CPU Time: '84893.687500'
2026-02-27 02:15:37 (42120): Guest Log:  *** Job finished ***
2026-02-27 02:15:37 (42120): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:16,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:16,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:26,349 | INFO     | [monitor] cgroup control has ended
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:26,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064234465088)>', '<ExcThread(monitor, started 140063035877120)>']
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:26,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:26,995 | INFO     | [monitor] control thread has ended
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:31,980 | INFO     | all workflow threads have been joined
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:31,980 | INFO     | end of generic workflow (traces error code: 0)
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:31,980 | INFO     | traces error code: 0
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:31,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:32,136 [wrapper] ==== pilot stdout END ====
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:32,143 [wrapper] ==== wrapper stdout RESUME ====
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:32,150 [wrapper] pilotpid: 6052
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:32,157 [wrapper] Pilot exit status: 0
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:32,480 [wrapper] pandaids: 7030255375
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:32,532 [wrapper] cleanup supervisor_pilot  4217 6053
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:32,546 [wrapper] Test setup, not cleaning
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:32,554 [wrapper] apfmon messages muted
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:32,561 [wrapper] ==== wrapper stdout END ====
2026-02-27 02:15:37 (42120): Guest Log: 2026-02-27 01:15:32,569 [wrapper] ==== wrapper stderr END ====
2026-02-27 02:15:37 (42120): Guest Log:  *** Error codes and diagnostics ***
2026-02-27 02:15:37 (42120): Guest Log:     "exeErrorCode": 0,
2026-02-27 02:15:37 (42120): Guest Log:     "exeErrorDiag": "",
2026-02-27 02:15:37 (42120): Guest Log:     "pilotErrorCode": 0,
2026-02-27 02:15:37 (42120): Guest Log:     "pilotErrorDiag": "",
2026-02-27 02:15:37 (42120): Guest Log:  *** Listing of results directory ***
2026-02-27 02:15:38 (42120): Guest Log: total 241036
2026-02-27 02:15:38 (42120): Guest Log: -rwx------. 1 atlas atlas     36322 Feb 25 13:13 runpilot2-wrapper.sh
2026-02-27 02:15:38 (42120): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb 25 13:15 pilot3.tar.gz
2026-02-27 02:15:38 (42120): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb 25 13:18 queuedata.json
2026-02-27 02:15:38 (42120): Guest Log: -rwxr-xr-x. 1 atlas atlas      8728 Feb 26 13:50 init_data.xml
2026-02-27 02:15:38 (42120): Guest Log: -rwxr-xr-x. 1 atlas atlas    597956 Feb 26 13:50 input.tar.gz
2026-02-27 02:15:38 (42120): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb 26 13:50 start_atlas.sh
2026-02-27 02:15:38 (42120): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb 26 13:50 EVNT.48220085._000075.pool.root.1 -> /data/./ATLAS.root_0
2026-02-27 02:15:38 (42120): Guest Log: -rw-r--r--. 1 atlas atlas      2566 Feb 26 13:50 pandaJob.out
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas       410 Feb 26 13:55 workernode_map.json
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas    998431 Feb 26 13:56 agis_schedconf.cvmfs.json
2026-02-27 02:15:38 (42120): Guest Log: drwx------. 5 atlas atlas      4096 Feb 26 13:56 pilot3
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas 230545412 Feb 27 01:13 HITS.48838416._001837.pool.root.1
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas      1031 Feb 27 01:14 memory_monitor_summary.json
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas   1513015 Feb 27 01:14 agis_ddmendpoints.agis.ALL.json
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas    756166 Feb 27 01:14 log.48838416._001837.job.log.tgz.1
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas      6328 Feb 27 01:14 heartbeat.json
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas        95 Feb 27 01:15 pilot_heartbeat.json
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas      4801 Feb 27 01:15 pilotlog.txt
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas   5455336 Feb 27 01:15 log.48838416._001837.job.log.1
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas       357 Feb 27 01:15 output.list
2026-02-27 02:15:38 (42120): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb 27 01:15 runtime_log
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas   6225920 Feb 27 01:15 result.tar.gz
2026-02-27 02:15:38 (42120): Guest Log: -rw-r--r--. 1 atlas atlas      8742 Feb 27 01:15 runtime_log.err
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas       660 Feb 27 01:15 k17MDm4sTF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGmzKDm3b5Lbn.diag
2026-02-27 02:15:38 (42120): Guest Log: Looking for outputfile HITS.48838416._001837.pool.root.1
2026-02-27 02:15:38 (42120): Guest Log: HITS file was successfully produced
2026-02-27 02:15:38 (42120): Guest Log: -rw-------. 1 atlas atlas 230545412 Feb 27 01:13 /home/atlas/RunAtlas/HITS.48838416._001837.pool.root.1
2026-02-27 02:15:38 (42120): Guest Log: Successfully finished the ATLAS job!
2026-02-27 02:15:38 (42120): Guest Log: Copying the results back to the shared directory!
2026-02-27 02:15:38 (42120): Guest Log:  *** Contents of shared directory: ***
2026-02-27 02:15:38 (42120): Guest Log: total 515984
2026-02-27 02:15:38 (42120): Guest Log: -rwxrwxrwx. 1 root root 290964128 Feb 26 13:48 ATLAS.root_0
2026-02-27 02:15:38 (42120): Guest Log: -rwxrwxrwx. 1 root root 230545412 Feb 27 01:15 HITS.pool.root.1
2026-02-27 02:15:38 (42120): Guest Log: -rwxrwxrwx. 1 root root      8728 Feb 26 13:48 init_data.xml
2026-02-27 02:15:38 (42120): Guest Log: -rwxrwxrwx. 1 root root    597956 Feb 25 14:17 input.tar.gz
2026-02-27 02:15:38 (42120): Guest Log: -rwxrwxrwx. 1 root root   6225920 Feb 27 01:15 result.tar.gz
2026-02-27 02:15:38 (42120): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb 25 14:17 start_atlas.sh
2026-02-27 02:15:38 (42120): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-27 02:15:38 (42120): VM Completion File Detected.
2026-02-27 02:15:38 (42120): Powering off VM.
2026-02-27 02:15:40 (42120): Successfully stopped VM.
2026-02-27 02:15:40 (42120): Deregistering VM. (boinc_df294e15e2063739, slot#4)
2026-02-27 02:15:42 (42120): Removing network bandwidth throttle group from VM.
2026-02-27 02:15:43 (42120): Removing VM from VirtualBox.
2026-02-27 02:15:49 (42120): called boinc_finish(0)

</stderr_txt>
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