Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:43:15 (1908): wrapper (7.7.26015): starting
14:43:15 (1908): wrapper: running run_atlas (--nthreads 8)
[2026-02-25 14:43:15] Arguments: --nthreads 8
[2026-02-25 14:43:15] Threads: 8
[2026-02-25 14:43:15] Checking for CVMFS
[2026-02-25 14:43:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-25 14:43:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-25 14:43:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-25 14:43:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-25 14:43:19] 2.11.2.0 25311 103168 135832 156613 1 11 20327342 25165825 4818 130560 0 29827945 99.765 28828551 2712 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-25 14:43:19] CVMFS is ok
[2026-02-25 14:43:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-25 14:43:19] Checking for apptainer binary...
[2026-02-25 14:43:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-25 14:43:19] Running /usr/bin/apptainer --version
[2026-02-25 14:43:19] apptainer version 1.3.2-1.el7
[2026-02-25 14:43:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-25 14:43:33] cg-vwn420.simple-grid.lan
[2026-02-25 14:43:33] apptainer works
[2026-02-25 14:43:33] Set ATHENA_PROC_NUMBER=8
[2026-02-25 14:43:33] Set ATHENA_CORE_NUMBER=8
[2026-02-25 14:43:33] Starting ATLAS job with PandaID=7030253328
[2026-02-25 14:43:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-25 19:38:29]  *** The last 200 lines of the pilot log: ***
[2026-02-25 19:38:29] 2026-02-25 18:37:33,757 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-7030253328/memory_monitor_summary.json (trf name=prmon)
[2026-02-25 19:38:29] 2026-02-25 18:37:33,758 | INFO     | extracted standard info from prmon json
[2026-02-25 19:38:29] 2026-02-25 18:37:33,758 | INFO     | extracted standard memory fields from prmon json
[2026-02-25 19:38:29] 2026-02-25 18:37:33,758 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-25 19:38:29] 2026-02-25 18:37:33,758 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 19:38:29] 2026-02-25 18:37:33,758 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 19:38:29] 2026-02-25 18:37:33,764 | INFO     | fitting pss+swap vs Time
[2026-02-25 19:38:29] 2026-02-25 18:37:33,765 | INFO     | sum of square deviations: 6806862510.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,768 | INFO     | sum of deviations: 100675098999.00003
[2026-02-25 19:38:29] 2026-02-25 18:37:33,769 | INFO     | mean x: 1772036103.5
[2026-02-25 19:38:29] 2026-02-25 18:37:33,769 | INFO     | mean y: 2481432.242857143
[2026-02-25 19:38:29] 2026-02-25 18:37:33,769 | INFO     | intersect: -26206349712.440384
[2026-02-25 19:38:29] 2026-02-25 18:37:33,769 | INFO     | chi2: 5.93730868762443
[2026-02-25 19:38:29] 2026-02-25 18:37:33,770 | INFO     | sum of square deviations: 6448679050.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,773 | INFO     | sum of deviations: 117413374193.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,773 | INFO     | mean x: 1772035951.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,773 | INFO     | mean y: 2488442.690909091
[2026-02-25 19:38:29] 2026-02-25 18:37:33,773 | INFO     | intersect: -32261595191.338234
[2026-02-25 19:38:29] 2026-02-25 18:37:33,774 | INFO     | chi2: 5.204039440863977
[2026-02-25 19:38:29] 2026-02-25 18:37:33,774 | INFO     | current chi2=5.204039440863977 (change=12.350195776225346 %)
[2026-02-25 19:38:29] 2026-02-25 18:37:33,774 | INFO     | right removable region: 274
[2026-02-25 19:38:29] 2026-02-25 18:37:33,775 | INFO     | sum of square deviations: 6448679050.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,777 | INFO     | sum of deviations: 6532579060.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,777 | INFO     | mean x: 1772036256.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,778 | INFO     | mean y: 2521478.909090909
[2026-02-25 19:38:29] 2026-02-25 18:37:33,778 | INFO     | intersect: -1792569709.4958272
[2026-02-25 19:38:29] 2026-02-25 18:37:33,778 | INFO     | chi2: 1.6706767583100843
[2026-02-25 19:38:29] 2026-02-25 18:37:33,778 | INFO     | current chi2=1.6706767583100843 (change=71.8613795204484 %)
[2026-02-25 19:38:29] 2026-02-25 18:37:33,779 | INFO     | sum of square deviations: 6103286527.5
[2026-02-25 19:38:29] 2026-02-25 18:37:33,782 | INFO     | sum of deviations: -27272575034.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,782 | INFO     | mean x: 1772036408.5
[2026-02-25 19:38:29] 2026-02-25 18:37:33,782 | INFO     | mean y: 2536297.6148148146
[2026-02-25 19:38:29] 2026-02-25 18:37:33,782 | INFO     | intersect: 7920892366.274108
[2026-02-25 19:38:29] 2026-02-25 18:37:33,783 | INFO     | chi2: 0.8734079483422925
[2026-02-25 19:38:29] 2026-02-25 18:37:33,783 | INFO     | current chi2=0.8734079483422925 (change=47.72130850579628 %)
[2026-02-25 19:38:29] 2026-02-25 18:37:33,783 | INFO     | sum of square deviations: 5770452380.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,786 | INFO     | sum of deviations: -27113537237.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,786 | INFO     | mean x: 1772036561.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,786 | INFO     | mean y: 2536199.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,786 | INFO     | intersect: 8328777560.686606
[2026-02-25 19:38:29] 2026-02-25 18:37:33,787 | INFO     | chi2: 0.8565522373085971
[2026-02-25 19:38:29] 2026-02-25 18:37:33,787 | INFO     | current chi2=0.8565522373085971 (change=1.929878365051196 %)
[2026-02-25 19:38:29] 2026-02-25 18:37:33,787 | INFO     | left removable region: 30
[2026-02-25 19:38:29] 2026-02-25 18:37:33,788 | INFO     | sum of square deviations: 4504437945.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,790 | INFO     | sum of deviations: 4662468937.0
[2026-02-25 19:38:29] 2026-02-25 18:37:33,790 | INFO     | mean x: 1772036835.5
[2026-02-25 19:38:29] 2026-02-25 18:37:33,790 | INFO     | mean y: 2537764.7459016396
[2026-02-25 19:38:29] 2026-02-25 18:37:33,790 | INFO     | intersect: -1831668145.4297638
[2026-02-25 19:38:29] 2026-02-25 18:37:33,791 | INFO     | chi2: 0.0008548463837795019
[2026-02-25 19:38:29] 2026-02-25 18:37:33,791 | INFO     | current memory leak: 1.04 B/s (using 244 data points, chi2=0.00)
[2026-02-25 19:38:29] 2026-02-25 18:37:33,791 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-02-25 19:38:29] 2026-02-25 18:37:33,792 | INFO     | ..............................
[2026-02-25 19:38:29] 2026-02-25 18:37:33,792 | INFO     | . Timing measurements:
[2026-02-25 19:38:29] 2026-02-25 18:37:33,792 | INFO     | . get job = 0 s
[2026-02-25 19:38:29] 2026-02-25 18:37:33,792 | INFO     | . initial setup = 104 s
[2026-02-25 19:38:29] 2026-02-25 18:37:33,792 | INFO     | . payload setup = 127 s
[2026-02-25 19:38:29] 2026-02-25 18:37:33,792 | INFO     | . stage-in = 0 s
[2026-02-25 19:38:29] 2026-02-25 18:37:33,792 | INFO     | . payload execution = 17173 s
[2026-02-25 19:38:29] 2026-02-25 18:37:33,792 | INFO     | . stage-out = 3 s
[2026-02-25 19:38:29] 2026-02-25 18:37:33,793 | INFO     | . log creation = 1 s
[2026-02-25 19:38:29] 2026-02-25 18:37:33,793 | INFO     | ..............................
[2026-02-25 19:38:29] 2026-02-25 18:37:34,263 | INFO     | time since job start (17326s) is within the limit (349056.0s)
[2026-02-25 19:38:29] 2026-02-25 18:37:34,423 | INFO     | 
[2026-02-25 19:38:29] 2026-02-25 18:37:34,423 | INFO     | job summary report
[2026-02-25 19:38:29] 2026-02-25 18:37:34,423 | INFO     | --------------------------------------------------
[2026-02-25 19:38:29] 2026-02-25 18:37:34,423 | INFO     | PanDA job id: 7030253328
[2026-02-25 19:38:29] 2026-02-25 18:37:34,423 | INFO     | task id: 48838432
[2026-02-25 19:38:29] 2026-02-25 18:37:34,423 | INFO     | errors: (none)
[2026-02-25 19:38:29] 2026-02-25 18:37:34,423 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-25 19:38:29] 2026-02-25 18:37:34,424 | INFO     | pilot state: finished 
[2026-02-25 19:38:29] 2026-02-25 18:37:34,424 | INFO     | transexitcode: 0
[2026-02-25 19:38:29] 2026-02-25 18:37:34,424 | INFO     | exeerrorcode: 0
[2026-02-25 19:38:29] 2026-02-25 18:37:34,424 | INFO     | exeerrordiag: 
[2026-02-25 19:38:29] 2026-02-25 18:37:34,424 | INFO     | exitcode: 0
[2026-02-25 19:38:29] 2026-02-25 18:37:34,424 | INFO     | exitmsg: OK
[2026-02-25 19:38:29] 2026-02-25 18:37:34,424 | INFO     | cpuconsumptiontime: 66498 s
[2026-02-25 19:38:29] 2026-02-25 18:37:34,424 | INFO     | nevents: 400
[2026-02-25 19:38:29] 2026-02-25 18:37:34,424 | INFO     | neventsw: 0
[2026-02-25 19:38:29] 2026-02-25 18:37:34,425 | INFO     | pid: 10510
[2026-02-25 19:38:29] 2026-02-25 18:37:34,425 | INFO     | pgrp: 10510
[2026-02-25 19:38:29] 2026-02-25 18:37:34,425 | INFO     | corecount: 8
[2026-02-25 19:38:29] 2026-02-25 18:37:34,425 | INFO     | event service: False
[2026-02-25 19:38:29] 2026-02-25 18:37:34,425 | INFO     | sizes: {0: 2281795, 1: 2282312, 12: 2282312, 17305: 2314369, 17310: 2323367, 17311: 2323423, 17313: 2323745}
[2026-02-25 19:38:29] 2026-02-25 18:37:34,425 | INFO     | --------------------------------------------------
[2026-02-25 19:38:29] 2026-02-25 18:37:34,425 | INFO     | 
[2026-02-25 19:38:29] 2026-02-25 18:37:34,425 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-02-25 19:38:29] 2026-02-25 18:37:34,898 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,899 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,899 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,899 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,900 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,900 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,900 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,900 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,900 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,900 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,900 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,900 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,900 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-25 19:38:29] 2026-02-25 18:37:34,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,901 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-25 19:38:29] 2026-02-25 18:37:34,901 | INFO     | job 7030253328 has completed (purged errors)
[2026-02-25 19:38:29] 2026-02-25 18:37:34,901 | INFO     | overall cleanup function is called
[2026-02-25 19:38:29] 2026-02-25 18:37:35,910 | INFO     | --- collectZombieJob: --- 10, [10510]
[2026-02-25 19:38:29] 2026-02-25 18:37:35,910 | INFO     | zombie collector waiting for pid 10510
[2026-02-25 19:38:29] 2026-02-25 18:37:35,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-25 19:38:29] 2026-02-25 18:37:35,910 | INFO     | collected zombie processes
[2026-02-25 19:38:29] 2026-02-25 18:37:35,910 | INFO     | will attempt to kill all subprocesses of pid=10510
[2026-02-25 19:38:29] 2026-02-25 18:37:36,029 | INFO     | process IDs to be killed: [10510] (in reverse order)
[2026-02-25 19:38:29] 2026-02-25 18:37:36,305 | WARNING  | found no corresponding commands to process id(s)
[2026-02-25 19:38:29] 2026-02-25 18:37:36,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-25 19:38:29] 2026-02-25 18:37:36,309 | INFO     | did not find any defunct processes belonging to 10510
[2026-02-25 19:38:29] 2026-02-25 18:37:36,318 | INFO     | did not find any defunct processes belonging to 10510
[2026-02-25 19:38:29] 2026-02-25 18:37:36,319 | INFO     | ready for new job
[2026-02-25 19:38:29] 2026-02-25 18:37:36,319 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-25 19:38:29] 2026-02-25 18:37:36,321 | INFO     | **************************************
[2026-02-25 19:38:29] 2026-02-25 18:37:36,321 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-25 19:38:29] 2026-02-25 18:37:36,322 | INFO     | **************************************
[2026-02-25 19:38:29] 2026-02-25 18:37:36,322 | INFO     | 
[2026-02-25 19:38:29] 2026-02-25 18:37:36,322 | INFO     | pilot is running in a VM
[2026-02-25 19:38:29] 2026-02-25 18:37:36,322 | INFO     | architecture information:
[2026-02-25 19:38:29] 2026-02-25 18:37:36,328 | INFO     | executing command: cat /etc/os-release
[2026-02-25 19:38:29] 2026-02-25 18:37:36,414 | INFO     | cat /etc/os-release:
[2026-02-25 19:38:29] NAME="CentOS Linux"
[2026-02-25 19:38:29] VERSION="7 (Core)"
[2026-02-25 19:38:29] ID="centos"
[2026-02-25 19:38:29] ID_LIKE="rhel fedora"
[2026-02-25 19:38:29] VERSION_ID="7"
[2026-02-25 19:38:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-25 19:38:29] ANSI_COLOR="0;31"
[2026-02-25 19:38:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-25 19:38:29] HOME_URL="https://www.centos.org/"
[2026-02-25 19:38:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-25 19:38:29] 
[2026-02-25 19:38:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-25 19:38:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-25 19:38:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-25 19:38:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-25 19:38:29] 
[2026-02-25 19:38:29] 2026-02-25 18:37:36,414 | INFO     | **************************************
[2026-02-25 19:38:29] 2026-02-25 18:37:36,917 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-02-25 19:38:29] 2026-02-25 18:37:37,051 | INFO     | sufficient remaining disk space (496167288832 B)
[2026-02-25 19:38:29] 2026-02-25 18:37:37,052 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-25 19:38:29] 2026-02-25 18:37:37,052 | INFO     | current server update state: UPDATING_FINAL
[2026-02-25 19:38:29] 2026-02-25 18:37:37,052 | INFO     | update_server=False
[2026-02-25 19:38:29] 2026-02-25 18:37:37,052 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-25 19:38:29] 2026-02-25 18:37:37,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-25 19:38:29] 2026-02-25 18:37:37,291 | INFO     | all data control threads have been joined
[2026-02-25 19:38:29] 2026-02-25 18:37:37,432 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-25 19:38:29] 2026-02-25 18:37:37,432 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-25 19:38:29] 2026-02-25 18:37:37,432 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-25 19:38:29] 2026-02-25 18:37:37,432 | INFO     | will abort loop
[2026-02-25 19:38:29] 2026-02-25 18:37:38,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-25 19:38:29] 2026-02-25 18:37:38,058 | INFO     | [job] retrieve thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:38,075 | INFO     | all job control threads have been joined
[2026-02-25 19:38:29] 2026-02-25 18:37:38,149 | INFO     | [payload] validate_post thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:38,154 | INFO     | all payload control threads have been joined
[2026-02-25 19:38:29] 2026-02-25 18:37:38,197 | INFO     | [payload] failed_post thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:38,299 | INFO     | [data] control thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:38,343 | INFO     | [job] validate thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:38,438 | INFO     | [job] job monitor thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:38,727 | INFO     | [payload] execute_payloads thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:38,821 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:38,951 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-25 19:38:29] 2026-02-25 18:37:39,060 | INFO     | [data] copytool_out thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:39,075 | INFO     | [data] copytool_in thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:39,075 | INFO     | [job] create_data_payload thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:39,081 | INFO     | [job] control thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:39,160 | INFO     | [payload] control thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:39,166 | INFO     | [payload] validate_pre thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:39,957 | INFO     | [job] queue monitor thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:37:42,031 | INFO     | [data] queue_monitor thread has finished
[2026-02-25 19:38:29] 2026-02-25 18:38:07,438 | INFO     | PID=6020 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-25 19:38:29] 2026-02-25 18:38:07,438 | INFO     | .. there are 9 such processes running
[2026-02-25 19:38:29] 2026-02-25 18:38:07,440 | INFO     | found 0 job(s) in 20 queues
[2026-02-25 19:38:29] 2026-02-25 18:38:07,440 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-25 19:38:29] 2026-02-25 18:38:07,440 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-25 19:38:29] 2026-02-25 18:38:17,808 | INFO     | [monitor] cgroup control has ended
[2026-02-25 19:38:29] 2026-02-25 18:38:19,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295754086208)>', '<ExcThread(monitor, started 140295459018496)>']
[2026-02-25 19:38:29] 2026-02-25 18:38:19,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-25 19:38:29] 2026-02-25 18:38:19,509 | INFO     | [monitor] control thread has ended
[2026-02-25 19:38:29] 2026-02-25 18:38:24,228 | INFO     | all workflow threads have been joined
[2026-02-25 19:38:29] 2026-02-25 18:38:24,228 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-25 19:38:29] 2026-02-25 18:38:24,228 | INFO     | traces error code: 0
[2026-02-25 19:38:29] 2026-02-25 18:38:24,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-25 19:38:29] 2026-02-25 18:38:24,600 [wrapper] ==== pilot stdout END ====
[2026-02-25 19:38:29] 2026-02-25 18:38:24,648 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-25 19:38:29] 2026-02-25 18:38:24,729 [wrapper] pilotpid: 6020
[2026-02-25 19:38:29] 2026-02-25 18:38:24,790 [wrapper] Pilot exit status: 0
[2026-02-25 19:38:29] 2026-02-25 18:38:25,052 [wrapper] pandaids: 7030253328
[2026-02-25 19:38:29] 2026-02-25 18:38:25,999 [wrapper] cleanup supervisor_pilot 19372 6021
[2026-02-25 19:38:29] 2026-02-25 18:38:26,120 [wrapper] Test setup, not cleaning
[2026-02-25 19:38:29] 2026-02-25 18:38:26,177 [wrapper] apfmon messages muted
[2026-02-25 19:38:29] 2026-02-25 18:38:26,230 [wrapper] ==== wrapper stdout END ====
[2026-02-25 19:38:29] 2026-02-25 18:38:26,283 [wrapper] ==== wrapper stderr END ====
[2026-02-25 19:38:29]  *** Error codes and diagnostics ***
[2026-02-25 19:38:29]     "exeErrorCode": 0,
[2026-02-25 19:38:29]     "exeErrorDiag": "",
[2026-02-25 19:38:29]     "pilotErrorCode": 0,
[2026-02-25 19:38:29]     "pilotErrorDiag": "",
[2026-02-25 19:38:29]  *** Listing of results directory ***
[2026-02-25 19:38:29] total 504344
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc    584627 Feb 25 14:07 pilot3.tar.gz
[2026-02-25 19:38:29] -rwx------. 1 boinc boinc     36322 Feb 25 14:08 runpilot2-wrapper.sh
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc      5111 Feb 25 14:11 queuedata.json
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc       100 Feb 25 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-25 19:38:29] -rwxr-xr-x. 1 boinc boinc      7986 Feb 25 14:43 run_atlas
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc       105 Feb 25 14:43 job.xml
[2026-02-25 19:38:29] -rw-r--r--. 2 boinc boinc 284300176 Feb 25 14:43 EVNT.48220101._000019.pool.root.1
[2026-02-25 19:38:29] drwxrwx--x. 2 boinc boinc        68 Feb 25 14:43 shared
[2026-02-25 19:38:29] -rw-r--r--. 2 boinc boinc    597972 Feb 25 14:43 input.tar.gz
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc      6391 Feb 25 14:43 init_data.xml
[2026-02-25 19:38:29] -rw-r--r--. 2 boinc boinc     15845 Feb 25 14:43 start_atlas.sh
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc         0 Feb 25 14:43 boinc_lockfile
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc      2576 Feb 25 14:43 pandaJob.out
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc       415 Feb 25 14:48 workernode_map.json
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc    995657 Feb 25 14:48 agis_schedconf.cvmfs.json
[2026-02-25 19:38:29] drwx------. 5 boinc boinc      4096 Feb 25 14:48 pilot3
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc 222437115 Feb 25 19:35 HITS.48838432._000453.pool.root.1
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc       531 Feb 25 19:36 boinc_task_state.xml
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc      1013 Feb 25 19:37 memory_monitor_summary.json
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc   1513015 Feb 25 19:37 agis_ddmendpoints.agis.ALL.json
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc    491356 Feb 25 19:37 log.48838432._000453.job.log.tgz.1
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc      6310 Feb 25 19:37 heartbeat.json
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc        28 Feb 25 19:38 wrapper_checkpoint.txt
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc      8192 Feb 25 19:38 boinc_mmap_file
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc        95 Feb 25 19:38 pilot_heartbeat.json
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc      5065 Feb 25 19:38 pilotlog.txt
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc   2405126 Feb 25 19:38 log.48838432._000453.job.log.1
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc       357 Feb 25 19:38 output.list
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc       620 Feb 25 19:38 runtime_log
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc   2918400 Feb 25 19:38 result.tar.gz
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc      8816 Feb 25 19:38 runtime_log.err
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc       656 Feb 25 19:38 8QyMDmUoTF9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkfzKDm5Zjxun.diag
[2026-02-25 19:38:29] -rw-r--r--. 1 boinc boinc     20704 Feb 25 19:38 stderr.txt
[2026-02-25 19:38:29] HITS file was successfully produced:
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc 222437115 Feb 25 19:35 shared/HITS.pool.root.1
[2026-02-25 19:38:29]  *** Contents of shared directory: ***
[2026-02-25 19:38:29] total 498316
[2026-02-25 19:38:29] -rw-r--r--. 2 boinc boinc 284300176 Feb 25 14:43 ATLAS.root_0
[2026-02-25 19:38:29] -rw-r--r--. 2 boinc boinc    597972 Feb 25 14:43 input.tar.gz
[2026-02-25 19:38:29] -rw-r--r--. 2 boinc boinc     15845 Feb 25 14:43 start_atlas.sh
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc 222437115 Feb 25 19:35 HITS.pool.root.1
[2026-02-25 19:38:29] -rw-------. 1 boinc boinc   2918400 Feb 25 19:38 result.tar.gz
19:38:31 (1908): run_atlas exited; CPU time 66769.954128
19:38:31 (1908): called boinc_finish(0)

</stderr_txt>
]]>

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