Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:35:32 (42302): wrapper (7.7.26015): starting
14:35:32 (42302): wrapper: running run_atlas (--nthreads 3)
[2026-02-25 14:35:32] Arguments: --nthreads 3
[2026-02-25 14:35:32] Threads: 3
[2026-02-25 14:35:32] Checking for CVMFS
[2026-02-25 14:35:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-25 14:35:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-25 14:35:36] Running cvmfs_config stat atlas.cern.ch
[2026-02-25 14:35:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-25 14:35:36] 2.9.2.0 42497 0 29132 156613 3 1 18503396 36864001 0 130560 0 0 0.000 1336 1182 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-25 14:35:36] CVMFS is ok
[2026-02-25 14:35:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-25 14:35:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-25 14:35:36] Further information can be found at the LHC@home message board.
[2026-02-25 14:35:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-25 14:35:36] Checking for apptainer binary...
[2026-02-25 14:35:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-25 14:35:36] Running /usr/bin/apptainer --version
[2026-02-25 14:35:36] apptainer version 1.4.1-1.1
[2026-02-25 14:35:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-25 14:35:36] thA385
[2026-02-25 14:35:36] apptainer works
[2026-02-25 14:35:36] Set ATHENA_PROC_NUMBER=3
[2026-02-25 14:35:36] Set ATHENA_CORE_NUMBER=3
[2026-02-25 14:35:36] Starting ATLAS job with PandaID=7030255238
[2026-02-25 14:35:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:58:03 (56359): wrapper (7.7.26015): starting
15:58:03 (56359): wrapper: running run_atlas (--nthreads 3)
[2026-02-25 15:58:03] Arguments: --nthreads 3
[2026-02-25 15:58:03] Threads: 3
[2026-02-25 15:58:03] This job has been restarted, cleaning up previous attempt
[2026-02-25 15:58:03] Checking for CVMFS
[2026-02-25 15:58:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-25 15:58:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-25 15:58:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-25 15:58:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-25 15:58:04] 2.9.2.0 56485 0 30004 156614 4 1 18524120 36864001 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-25 15:58:04] CVMFS is ok
[2026-02-25 15:58:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-25 15:58:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-25 15:58:04] Further information can be found at the LHC@home message board.
[2026-02-25 15:58:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-25 15:58:04] Checking for apptainer binary...
[2026-02-25 15:58:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-25 15:58:04] Running /usr/bin/apptainer --version
[2026-02-25 15:58:04] apptainer version 1.4.1-1.1
[2026-02-25 15:58:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-25 15:58:04] thA385
[2026-02-25 15:58:04] apptainer works
[2026-02-25 15:58:04] Set ATHENA_PROC_NUMBER=3
[2026-02-25 15:58:04] Set ATHENA_CORE_NUMBER=3
[2026-02-25 15:58:04] Starting ATLAS job with PandaID=7030255238
[2026-02-25 15:58:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-25 17:34:26]  *** The last 200 lines of the pilot log: ***
[2026-02-25 17:34:26] 2026-02-25 16:33:31,237 | INFO     | executing command: cat /etc/os-release
[2026-02-25 17:34:26] 2026-02-25 16:33:31,246 | INFO     | cat /etc/os-release:
[2026-02-25 17:34:26] NAME="CentOS Linux"
[2026-02-25 17:34:26] VERSION="7 (Core)"
[2026-02-25 17:34:26] ID="centos"
[2026-02-25 17:34:26] ID_LIKE="rhel fedora"
[2026-02-25 17:34:26] VERSION_ID="7"
[2026-02-25 17:34:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-25 17:34:26] ANSI_COLOR="0;31"
[2026-02-25 17:34:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-25 17:34:26] HOME_URL="https://www.centos.org/"
[2026-02-25 17:34:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-25 17:34:26] 
[2026-02-25 17:34:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-25 17:34:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-25 17:34:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-25 17:34:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-25 17:34:26] 
[2026-02-25 17:34:26] 2026-02-25 16:33:31,247 | INFO     | **************************************
[2026-02-25 17:34:26] 2026-02-25 16:33:31,750 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-25 17:34:26] 2026-02-25 16:33:31,762 | INFO     | sufficient remaining disk space (387713073152 B)
[2026-02-25 17:34:26] 2026-02-25 16:33:31,762 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-25 17:34:26] 2026-02-25 16:33:31,762 | INFO     | current server update state: UPDATING_FINAL
[2026-02-25 17:34:26] 2026-02-25 16:33:31,762 | INFO     | update_server=False
[2026-02-25 17:34:26] 2026-02-25 16:33:31,762 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-25 17:34:26] 2026-02-25 16:33:31,763 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-25 17:34:26] 2026-02-25 16:33:31,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-25 17:34:26] 2026-02-25 16:33:31,837 | INFO     | all data control threads have been joined
[2026-02-25 17:34:26] 2026-02-25 16:33:32,543 | INFO     | all job control threads have been joined
[2026-02-25 17:34:26] 2026-02-25 16:33:32,768 | INFO     | [job] queue monitor thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:32,768 | INFO     | [job] retrieve thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:32,842 | INFO     | [data] control thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:33,094 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-25 17:34:26] 2026-02-25 16:33:33,175 | INFO     | all payload control threads have been joined
[2026-02-25 17:34:26] 2026-02-25 16:33:33,420 | INFO     | [payload] validate_pre thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:33,549 | INFO     | [job] control thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:33,577 | INFO     | [payload] execute_payloads thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:33,798 | WARNING  | process 62976 can no longer be monitored (due to stat problems) - aborting
[2026-02-25 17:34:26] 2026-02-25 16:33:33,806 | INFO     | [payload] validate_post thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:33,827 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-25 17:34:26] 2026-02-25 16:33:33,863 | INFO     | number of running child processes to parent process 62976: 1
[2026-02-25 17:34:26] 2026-02-25 16:33:33,863 | INFO     | maximum number of monitored processes: 6
[2026-02-25 17:34:26] 2026-02-25 16:33:33,863 | INFO     | aborting job monitoring since job object (job id=7030255238) has expired
[2026-02-25 17:34:26] 2026-02-25 16:33:33,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-25 17:34:26] 2026-02-25 16:33:33,863 | INFO     | will abort loop
[2026-02-25 17:34:26] 2026-02-25 16:33:33,991 | INFO     | [job] create_data_payload thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:34,051 | INFO     | [data] copytool_in thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:34,075 | INFO     | [job] validate thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:34,181 | INFO     | [payload] control thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:34,190 | INFO     | job.realtimelogging is not enabled
[2026-02-25 17:34:26] 2026-02-25 16:33:34,283 | INFO     | [payload] failed_post thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:34,869 | INFO     | [job] job monitor thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:35,100 | INFO     | [data] copytool_out thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:35,195 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:33:35,769 | INFO     | [data] queue_monitor thread has finished
[2026-02-25 17:34:26] 2026-02-25 16:34:02,744 | INFO     | PID=60570 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-25 17:34:26] 2026-02-25 16:34:02,744 | INFO     | found 0 job(s) in 20 queues
[2026-02-25 17:34:26] 2026-02-25 16:34:02,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-25 17:34:26] 2026-02-25 16:34:02,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-25 17:34:26] 2026-02-25 16:34:19,827 | INFO     | [monitor] cgroup control has ended
[2026-02-25 17:34:26] 2026-02-25 16:34:21,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139732011628352)>', '<ExcThread(monitor, started 139731375478528)>']
[2026-02-25 17:34:26] 2026-02-25 16:34:21,848 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-25 17:34:26] 2026-02-25 16:34:21,848 | INFO     | [monitor] control thread has ended
[2026-02-25 17:34:26] 2026-02-25 16:34:26,038 | INFO     | all workflow threads have been joined
[2026-02-25 17:34:26] 2026-02-25 16:34:26,038 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-25 17:34:26] 2026-02-25 16:34:26,038 | INFO     | traces error code: 0
[2026-02-25 17:34:26] 2026-02-25 16:34:26,038 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-25 17:34:26] 2026-02-25 16:34:26,128 [wrapper] ==== pilot stdout END ====
[2026-02-25 17:34:26] 2026-02-25 16:34:26,131 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-25 17:34:26] 2026-02-25 16:34:26,133 [wrapper] pilotpid: 60570
[2026-02-25 17:34:26] 2026-02-25 16:34:26,136 [wrapper] Pilot exit status: 0
[2026-02-25 17:34:26] 2026-02-25 16:34:26,144 [wrapper] pandaids: 7030255238 7030255238
[2026-02-25 17:34:26] 2026-02-25 16:34:26,163 [wrapper] cleanup supervisor_pilot   68177 60571
[2026-02-25 17:34:26] 2026-02-25 16:34:26,166 [wrapper] Test setup, not cleaning
[2026-02-25 17:34:26] 2026-02-25 16:34:26,168 [wrapper] apfmon messages muted
[2026-02-25 17:34:26] 2026-02-25 16:34:26,171 [wrapper] ==== wrapper stdout END ====
[2026-02-25 17:34:26] 2026-02-25 16:34:26,173 [wrapper] ==== wrapper stderr END ====
[2026-02-25 17:34:26]  *** Error codes and diagnostics ***
[2026-02-25 17:34:26]     "exeErrorCode": 0,
[2026-02-25 17:34:26]     "exeErrorDiag": "",
[2026-02-25 17:34:26]     "pilotErrorCode": 0,
[2026-02-25 17:34:26]     "pilotErrorDiag": "",
[2026-02-25 17:34:26]  *** Listing of results directory ***
[2026-02-25 17:34:26] total 796440
[2026-02-25 17:34:26] drwx------ 5 boinc boinc      4096 Feb  2 16:00 pilot3
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc    584627 Feb 25 14:07 pilot3.tar.gz
[2026-02-25 17:34:26] -rwx------ 1 boinc boinc     36322 Feb 25 14:08 runpilot2-wrapper.sh
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc      5111 Feb 25 14:11 queuedata.json
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc       100 Feb 25 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-25 17:34:26] -rwxr-xr-x 1 boinc boinc      7986 Feb 25 14:35 run_atlas
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc       105 Feb 25 14:35 job.xml
[2026-02-25 17:34:26] -rw-r--r-- 3 boinc boinc 293403307 Feb 25 14:35 EVNT.48220085._000070.pool.root.1
[2026-02-25 17:34:26] -rw-r--r-- 3 boinc boinc 293403307 Feb 25 14:35 ATLAS.root_0
[2026-02-25 17:34:26] -rw-r--r-- 2 boinc boinc    597959 Feb 25 14:35 input.tar.gz
[2026-02-25 17:34:26] -rw-r--r-- 2 boinc boinc     15845 Feb 25 14:35 start_atlas.sh
[2026-02-25 17:34:26] drwxrwx--x 2 boinc boinc      4096 Feb 25 14:35 shared
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc         0 Feb 25 14:35 boinc_setup_complete
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc         0 Feb 25 14:35 boinc_lockfile
[2026-02-25 17:34:26] -rw------- 1 boinc boinc   1513015 Feb 25 14:35 agis_ddmendpoints.agis.ALL.json
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc      6449 Feb 25 15:58 init_data.xml
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc      2566 Feb 25 15:58 pandaJob.out
[2026-02-25 17:34:26] -rw------- 1 boinc boinc    995649 Feb 25 15:58 agis_schedconf.cvmfs.json
[2026-02-25 17:34:26] -rw------- 1 boinc boinc       423 Feb 25 15:58 workernode_map.json
[2026-02-25 17:34:26] -rw------- 1 boinc boinc 222606440 Feb 25 17:33 HITS.48838416._001725.pool.root.1
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc       530 Feb 25 17:33 boinc_task_state.xml
[2026-02-25 17:34:26] -rw------- 1 boinc boinc      1017 Feb 25 17:33 memory_monitor_summary.json
[2026-02-25 17:34:26] -rw------- 1 boinc boinc    280320 Feb 25 17:33 log.48838416._001725.job.log.tgz.1
[2026-02-25 17:34:26] -rw------- 1 boinc boinc      6311 Feb 25 17:33 heartbeat.json
[2026-02-25 17:34:26] -rw------- 1 boinc boinc        97 Feb 25 17:34 pilot_heartbeat.json
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc      8192 Feb 25 17:34 boinc_mmap_file
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc        27 Feb 25 17:34 wrapper_checkpoint.txt
[2026-02-25 17:34:26] -rw------- 1 boinc boinc      5338 Feb 25 17:34 pilotlog.txt
[2026-02-25 17:34:26] -rw------- 1 boinc boinc    828229 Feb 25 17:34 log.48838416._001725.job.log.1
[2026-02-25 17:34:26] -rw------- 1 boinc boinc       357 Feb 25 17:34 output.list
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc       620 Feb 25 17:34 runtime_log
[2026-02-25 17:34:26] -rw------- 1 boinc boinc   1126400 Feb 25 17:34 result.tar.gz
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc      8981 Feb 25 17:34 runtime_log.err
[2026-02-25 17:34:26] -rw------- 1 boinc boinc       782 Feb 25 17:34 RhQODmBoTF9n9Rq4apOajLDm4fhM0noT9bVooX4SDmy4xKDmdcPkdn.diag
[2026-02-25 17:34:26] -rw-r--r-- 1 boinc boinc     11696 Feb 25 17:34 stderr.txt
[2026-02-25 17:34:26] HITS file was successfully produced:
[2026-02-25 17:34:26] -rw------- 1 boinc boinc 222606440 Feb 25 17:33 shared/HITS.pool.root.1
[2026-02-25 17:34:26]  *** Contents of shared directory: ***
[2026-02-25 17:34:26] total 505628
[2026-02-25 17:34:26] -rw-r--r-- 3 boinc boinc 293403307 Feb 25 14:35 ATLAS.root_0
[2026-02-25 17:34:26] -rw-r--r-- 2 boinc boinc    597959 Feb 25 14:35 input.tar.gz
[2026-02-25 17:34:26] -rw-r--r-- 2 boinc boinc     15845 Feb 25 14:35 start_atlas.sh
[2026-02-25 17:34:26] -rw------- 1 boinc boinc 222606440 Feb 25 17:33 HITS.pool.root.1
[2026-02-25 17:34:26] -rw------- 1 boinc boinc   1126400 Feb 25 17:34 result.tar.gz
17:34:27 (56359): run_atlas exited; CPU time 16416.947736
17:34:27 (56359): called boinc_finish(0)

</stderr_txt>
]]>

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