Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:19:01 (188778): wrapper (7.7.26015): starting
05:19:01 (188778): wrapper: running run_atlas (--nthreads 12)
[2026-02-25 05:19:01] Arguments: --nthreads 12
[2026-02-25 05:19:01] Threads: 12
[2026-02-25 05:19:01] Checking for CVMFS
[2026-02-25 05:19:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-25 05:19:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-25 05:19:02] Running cvmfs_config stat atlas.cern.ch
[2026-02-25 05:19:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-25 05:19:03] 2.13.3.0 14259 159523 352792 156608 3 300 22412543 32935936 25713 16776704 0 716083836 99.730 548941497 32417 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-25 05:19:03] CVMFS is ok
[2026-02-25 05:19:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-25 05:19:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-25 05:19:03] Further information can be found at the LHC@home message board.
[2026-02-25 05:19:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-25 05:19:03] Checking for apptainer binary...
[2026-02-25 05:19:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-25 05:19:03] Running /usr/bin/apptainer --version
[2026-02-25 05:19:03] apptainer version 1.4.5-2.el9
[2026-02-25 05:19:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-25 05:19:03] c-4-36.aglt2.org
[2026-02-25 05:19:03] apptainer works
[2026-02-25 05:19:03] Set ATHENA_PROC_NUMBER=12
[2026-02-25 05:19:03] Set ATHENA_CORE_NUMBER=12
[2026-02-25 05:19:03] Starting ATLAS job with PandaID=7022378024
[2026-02-25 05:19:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-25 11:38:14]  *** The last 200 lines of the pilot log: ***
[2026-02-25 11:38:14] 2026-02-25 16:37:28,067 | INFO     | preparing for final server update for job 7022378024 in state='finished'
[2026-02-25 11:38:14] 2026-02-25 16:37:28,196 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,196 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7022378024/jobReport.json
[2026-02-25 11:38:14] 2026-02-25 16:37:28,198 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-25 11:38:14] 2026-02-25 16:37:28,199 | INFO     | this job has now completed (state=finished)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,199 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,199 | INFO     | log transfer has been attempted: DONE
[2026-02-25 11:38:14] 2026-02-25 16:37:28,199 | INFO     | job 7022378024 has finished - writing final server update
[2026-02-25 11:38:14] 2026-02-25 16:37:28,200 | INFO     | total number of processed events: 400 (read)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,206 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7022378024/memory_monitor_summary.json (trf name=prmon)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,206 | INFO     | extracted standard info from prmon json
[2026-02-25 11:38:14] 2026-02-25 16:37:28,206 | INFO     | extracted standard memory fields from prmon json
[2026-02-25 11:38:14] 2026-02-25 16:37:28,207 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-25 11:38:14] 2026-02-25 16:37:28,207 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-25 11:38:14] 2026-02-25 16:37:28,207 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-25 11:38:14] 2026-02-25 16:37:28,214 | INFO     | fitting pss+swap vs Time
[2026-02-25 11:38:14] 2026-02-25 16:37:28,214 | INFO     | sum of square deviations: 15707052520.67305
[2026-02-25 11:38:14] 2026-02-25 16:37:28,218 | INFO     | sum of deviations: -79498562836.93782
[2026-02-25 11:38:14] 2026-02-25 16:37:28,218 | INFO     | mean x: 1772026156.4297297
[2026-02-25 11:38:14] 2026-02-25 16:37:28,218 | INFO     | mean y: 2723778.5216216217
[2026-02-25 11:38:14] 2026-02-25 16:37:28,218 | INFO     | intersect: 8971531424.6547
[2026-02-25 11:38:14] 2026-02-25 16:37:28,219 | INFO     | chi2: 3.0306877327191355
[2026-02-25 11:38:14] 2026-02-25 16:37:28,219 | INFO     | sum of square deviations: 15079014534.0109
[2026-02-25 11:38:14] 2026-02-25 16:37:28,223 | INFO     | sum of deviations: -53066533340.78081
[2026-02-25 11:38:14] 2026-02-25 16:37:28,223 | INFO     | mean x: 1772026003.947945
[2026-02-25 11:38:14] 2026-02-25 16:37:28,223 | INFO     | mean y: 2730128.9589041094
[2026-02-25 11:38:14] 2026-02-25 16:37:28,223 | INFO     | intersect: 6238898733.156247
[2026-02-25 11:38:14] 2026-02-25 16:37:28,224 | INFO     | chi2: 2.337596188534348
[2026-02-25 11:38:14] 2026-02-25 16:37:28,224 | INFO     | current chi2=2.337596188534348 (change=22.869117682505188 %)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,224 | INFO     | right removable region: 364
[2026-02-25 11:38:14] 2026-02-25 16:37:28,224 | INFO     | sum of square deviations: 15078646209.298578
[2026-02-25 11:38:14] 2026-02-25 16:37:28,228 | INFO     | sum of deviations: -155407740618.24374
[2026-02-25 11:38:14] 2026-02-25 16:37:28,228 | INFO     | mean x: 1772026308.9561644
[2026-02-25 11:38:14] 2026-02-25 16:37:28,228 | INFO     | mean y: 2742116.797260274
[2026-02-25 11:38:14] 2026-02-25 16:37:28,228 | INFO     | intersect: 18266092895.671577
[2026-02-25 11:38:14] 2026-02-25 16:37:28,229 | INFO     | chi2: 1.2299982911138425
[2026-02-25 11:38:14] 2026-02-25 16:37:28,229 | INFO     | current chi2=1.2299982911138425 (change=59.41520870544168 %)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,229 | INFO     | sum of square deviations: 14467327563.663877
[2026-02-25 11:38:14] 2026-02-25 16:37:28,232 | INFO     | sum of deviations: -152753713384.24173
[2026-02-25 11:38:14] 2026-02-25 16:37:28,233 | INFO     | mean x: 1772026461.4694445
[2026-02-25 11:38:14] 2026-02-25 16:37:28,233 | INFO     | mean y: 2741432.841666667
[2026-02-25 11:38:14] 2026-02-25 16:37:28,233 | INFO     | intersect: 18712736144.266068
[2026-02-25 11:38:14] 2026-02-25 16:37:28,233 | INFO     | chi2: 1.200070868022688
[2026-02-25 11:38:14] 2026-02-25 16:37:28,234 | INFO     | current chi2=1.200070868022688 (change=2.43312720898607 %)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,234 | INFO     | left removable region: 20
[2026-02-25 11:38:14] 2026-02-25 16:37:28,234 | INFO     | sum of square deviations: 12622958749.973785
[2026-02-25 11:38:14] 2026-02-25 16:37:28,237 | INFO     | sum of deviations: -93856250565.91855
[2026-02-25 11:38:14] 2026-02-25 16:37:28,237 | INFO     | mean x: 1772026583.4912791
[2026-02-25 11:38:14] 2026-02-25 16:37:28,237 | INFO     | mean y: 2739719.3604651163
[2026-02-25 11:38:14] 2026-02-25 16:37:28,238 | INFO     | intersect: 13178396419.49596
[2026-02-25 11:38:14] 2026-02-25 16:37:28,238 | INFO     | chi2: 0.4384358631327317
[2026-02-25 11:38:14] 2026-02-25 16:37:28,238 | INFO     | current memory leak: -7.44 B/s (using 344 data points, chi2=0.44)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,239 | INFO     | could have reported an average CPU frequency of 2600 MHz (16 samples)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,239 | INFO     | ..............................
[2026-02-25 11:38:14] 2026-02-25 16:37:28,239 | INFO     | . Timing measurements:
[2026-02-25 11:38:14] 2026-02-25 16:37:28,239 | INFO     | . get job = 0 s
[2026-02-25 11:38:14] 2026-02-25 16:37:28,240 | INFO     | . initial setup = 26 s
[2026-02-25 11:38:14] 2026-02-25 16:37:28,240 | INFO     | . payload setup = 34 s
[2026-02-25 11:38:14] 2026-02-25 16:37:28,240 | INFO     | . stage-in = 0 s
[2026-02-25 11:38:14] 2026-02-25 16:37:28,240 | INFO     | . payload execution = 22567 s
[2026-02-25 11:38:14] 2026-02-25 16:37:28,240 | INFO     | . stage-out = 4 s
[2026-02-25 11:38:14] 2026-02-25 16:37:28,240 | INFO     | . log creation = 0 s
[2026-02-25 11:38:14] 2026-02-25 16:37:28,240 | INFO     | ..............................
[2026-02-25 11:38:14] 2026-02-25 16:37:28,336 | INFO     | 
[2026-02-25 11:38:14] 2026-02-25 16:37:28,337 | INFO     | job summary report
[2026-02-25 11:38:14] 2026-02-25 16:37:28,337 | INFO     | --------------------------------------------------
[2026-02-25 11:38:14] 2026-02-25 16:37:28,337 | INFO     | PanDA job id: 7022378024
[2026-02-25 11:38:14] 2026-02-25 16:37:28,337 | INFO     | task id: 48318010
[2026-02-25 11:38:14] 2026-02-25 16:37:28,337 | INFO     | errors: (none)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,337 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-25 11:38:14] 2026-02-25 16:37:28,337 | INFO     | pilot state: finished 
[2026-02-25 11:38:14] 2026-02-25 16:37:28,338 | INFO     | transexitcode: 0
[2026-02-25 11:38:14] 2026-02-25 16:37:28,338 | INFO     | exeerrorcode: 0
[2026-02-25 11:38:14] 2026-02-25 16:37:28,338 | INFO     | exeerrordiag: 
[2026-02-25 11:38:14] 2026-02-25 16:37:28,338 | INFO     | exitcode: 0
[2026-02-25 11:38:14] 2026-02-25 16:37:28,338 | INFO     | exitmsg: OK
[2026-02-25 11:38:14] 2026-02-25 16:37:28,338 | INFO     | cpuconsumptiontime: 49696 s
[2026-02-25 11:38:14] 2026-02-25 16:37:28,338 | INFO     | nevents: 400
[2026-02-25 11:38:14] 2026-02-25 16:37:28,338 | INFO     | neventsw: 0
[2026-02-25 11:38:14] 2026-02-25 16:37:28,338 | INFO     | pid: 209960
[2026-02-25 11:38:14] 2026-02-25 16:37:28,338 | INFO     | pgrp: 209960
[2026-02-25 11:38:14] 2026-02-25 16:37:28,339 | INFO     | corecount: 12
[2026-02-25 11:38:14] 2026-02-25 16:37:28,339 | INFO     | event service: False
[2026-02-25 11:38:14] 2026-02-25 16:37:28,339 | INFO     | sizes: {0: 2281793, 1: 2272617, 2: 2282282, 12: 2282282, 22606: 2315944, 22610: 2324942, 22611: 2325126, 22612: 2325320}
[2026-02-25 11:38:14] 2026-02-25 16:37:28,339 | INFO     | --------------------------------------------------
[2026-02-25 11:38:14] 2026-02-25 16:37:28,339 | INFO     | 
[2026-02-25 11:38:14] 2026-02-25 16:37:28,339 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-25 11:38:14] 2026-02-25 16:37:28,362 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,362 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,362 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,362 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,363 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,363 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,363 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,363 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,363 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,363 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,363 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,364 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,364 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,364 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,364 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,364 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,364 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,364 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-25 11:38:14] 2026-02-25 16:37:28,365 | INFO     | job 7022378024 has completed (purged errors)
[2026-02-25 11:38:14] 2026-02-25 16:37:28,365 | INFO     | overall cleanup function is called
[2026-02-25 11:38:14] 2026-02-25 16:37:29,374 | INFO     | --- collectZombieJob: --- 10, [209960]
[2026-02-25 11:38:14] 2026-02-25 16:37:29,375 | INFO     | zombie collector waiting for pid 209960
[2026-02-25 11:38:14] 2026-02-25 16:37:29,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-25 11:38:14] 2026-02-25 16:37:29,376 | INFO     | collected zombie processes
[2026-02-25 11:38:14] 2026-02-25 16:37:29,376 | INFO     | will attempt to kill all subprocesses of pid=209960
[2026-02-25 11:38:14] 2026-02-25 16:37:30,810 | INFO     | process IDs to be killed: [209960] (in reverse order)
[2026-02-25 11:38:14] 2026-02-25 16:37:31,268 | WARNING  | found no corresponding commands to process id(s)
[2026-02-25 11:38:14] 2026-02-25 16:37:31,269 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-25 11:38:14] 2026-02-25 16:37:31,298 | INFO     | did not find any defunct processes belonging to 209960
[2026-02-25 11:38:14] 2026-02-25 16:37:31,329 | INFO     | did not find any defunct processes belonging to 209960
[2026-02-25 11:38:14] 2026-02-25 16:37:31,329 | INFO     | ready for new job
[2026-02-25 11:38:14] 2026-02-25 16:37:31,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-25 11:38:14] 2026-02-25 16:37:31,335 | INFO     | **************************************
[2026-02-25 11:38:14] 2026-02-25 16:37:31,336 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-25 11:38:14] 2026-02-25 16:37:31,336 | INFO     | **************************************
[2026-02-25 11:38:14] 2026-02-25 16:37:31,336 | INFO     | 
[2026-02-25 11:38:14] 2026-02-25 16:37:31,338 | INFO     | architecture information:
[2026-02-25 11:38:14] 2026-02-25 16:37:31,341 | INFO     | executing command: cat /etc/os-release
[2026-02-25 11:38:14] 2026-02-25 16:37:31,407 | INFO     | cat /etc/os-release:
[2026-02-25 11:38:14] NAME="CentOS Linux"
[2026-02-25 11:38:14] VERSION="7 (Core)"
[2026-02-25 11:38:14] ID="centos"
[2026-02-25 11:38:14] ID_LIKE="rhel fedora"
[2026-02-25 11:38:14] VERSION_ID="7"
[2026-02-25 11:38:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-25 11:38:14] ANSI_COLOR="0;31"
[2026-02-25 11:38:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-25 11:38:14] HOME_URL="https://www.centos.org/"
[2026-02-25 11:38:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-25 11:38:14] 
[2026-02-25 11:38:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-25 11:38:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-25 11:38:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-25 11:38:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-25 11:38:14] 
[2026-02-25 11:38:14] 2026-02-25 16:37:31,407 | INFO     | **************************************
[2026-02-25 11:38:14] 2026-02-25 16:37:31,910 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-25 11:38:14] 2026-02-25 16:37:32,036 | INFO     | sufficient remaining disk space (75668389888 B)
[2026-02-25 11:38:14] 2026-02-25 16:37:32,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-25 11:38:14] 2026-02-25 16:37:32,037 | INFO     | current server update state: UPDATING_FINAL
[2026-02-25 11:38:14] 2026-02-25 16:37:32,037 | INFO     | update_server=False
[2026-02-25 11:38:14] 2026-02-25 16:37:32,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-25 11:38:14] 2026-02-25 16:37:32,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-25 11:38:14] 2026-02-25 16:37:32,300 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-25 11:38:14] 2026-02-25 16:37:32,301 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-25 11:38:14] 2026-02-25 16:37:32,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-25 11:38:14] 2026-02-25 16:37:32,301 | INFO     | will abort loop
[2026-02-25 11:38:14] 2026-02-25 16:37:32,813 | INFO     | all data control threads have been joined
[2026-02-25 11:38:14] 2026-02-25 16:37:33,038 | INFO     | all job control threads have been joined
[2026-02-25 11:38:14] 2026-02-25 16:37:33,043 | INFO     | [job] retrieve thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:33,073 | INFO     | [payload] validate_post thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:33,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-25 11:38:14] 2026-02-25 16:37:33,309 | INFO     | [job] create_data_payload thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:33,313 | INFO     | [job] job monitor thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:33,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-25 11:38:14] 2026-02-25 16:37:33,421 | INFO     | all payload control threads have been joined
[2026-02-25 11:38:14] 2026-02-25 16:37:33,796 | INFO     | [payload] execute_payloads thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:33,819 | INFO     | [data] control thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:34,013 | INFO     | [payload] failed_post thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:34,044 | INFO     | [job] control thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:34,278 | INFO     | [data] copytool_out thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:34,312 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:34,367 | INFO     | [job] queue monitor thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:34,427 | INFO     | [payload] control thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:34,439 | INFO     | [job] validate thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:34,440 | INFO     | [payload] validate_pre thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:34,444 | INFO     | [data] copytool_in thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:37:37,163 | INFO     | [data] queue_monitor thread has finished
[2026-02-25 11:38:14] 2026-02-25 16:38:01,383 | INFO     | PID=198917 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-25 11:38:14] 2026-02-25 16:38:01,383 | INFO     | .. there are 41 such processes running
[2026-02-25 11:38:14] 2026-02-25 16:38:01,385 | INFO     | found 0 job(s) in 20 queues
[2026-02-25 11:38:14] 2026-02-25 16:38:01,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-25 11:38:14] 2026-02-25 16:38:01,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-25 11:38:14] 2026-02-25 16:38:05,502 | INFO     | [monitor] cgroup control has ended
[2026-02-25 11:38:14] 2026-02-25 16:38:07,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067853084480)>', '<ExcThread(monitor, started 140067498600192)>']
[2026-02-25 11:38:14] 2026-02-25 16:38:07,420 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-25 11:38:14] 2026-02-25 16:38:07,421 | INFO     | [monitor] control thread has ended
[2026-02-25 11:38:14] 2026-02-25 16:38:12,069 | INFO     | all workflow threads have been joined
[2026-02-25 11:38:14] 2026-02-25 16:38:12,070 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-25 11:38:14] 2026-02-25 16:38:12,070 | INFO     | traces error code: 0
[2026-02-25 11:38:14] 2026-02-25 16:38:12,070 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-25 11:38:14] 2026-02-25 16:38:12,616 [wrapper] ==== pilot stdout END ====
[2026-02-25 11:38:14] 2026-02-25 16:38:12,644 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-25 11:38:14] 2026-02-25 16:38:12,678 [wrapper] pilotpid: 198917
[2026-02-25 11:38:14] 2026-02-25 16:38:12,724 [wrapper] Pilot exit status: 0
[2026-02-25 11:38:14] 2026-02-25 16:38:12,895 [wrapper] pandaids: 7022378024
[2026-02-25 11:38:14] 2026-02-25 16:38:13,288 [wrapper] cleanup supervisor_pilot 1256334 198918
[2026-02-25 11:38:14] 2026-02-25 16:38:13,300 [wrapper] Test setup, not cleaning
[2026-02-25 11:38:14] 2026-02-25 16:38:13,348 [wrapper] apfmon messages muted
[2026-02-25 11:38:14] 2026-02-25 16:38:13,391 [wrapper] ==== wrapper stdout END ====
[2026-02-25 11:38:14] 2026-02-25 16:38:13,433 [wrapper] ==== wrapper stderr END ====
[2026-02-25 11:38:14]  *** Error codes and diagnostics ***
[2026-02-25 11:38:14]     "exeErrorCode": 0,
[2026-02-25 11:38:14]     "exeErrorDiag": "",
[2026-02-25 11:38:14]     "pilotErrorCode": 0,
[2026-02-25 11:38:14]     "pilotErrorDiag": "",
[2026-02-25 11:38:14]  *** Listing of results directory ***
[2026-02-25 11:38:14] total 674252
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas    584627 Feb 19 12:01 pilot3.tar.gz
[2026-02-25 11:38:14] -rwx------. 1 boincer umatlas     36322 Feb 19 12:01 runpilot2-wrapper.sh
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas      5111 Feb 19 12:01 queuedata.json
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas       100 Feb 25 05:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-25 11:38:14] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 25 05:18 run_atlas
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas       105 Feb 25 05:18 job.xml
[2026-02-25 11:38:14] -rw-r--r--. 2 boincer umatlas 496153901 Feb 25 05:19 EVNT.48318008._000229.pool.root.1
[2026-02-25 11:38:14] -rw-r--r--. 2 boincer umatlas    597952 Feb 25 05:19 input.tar.gz
[2026-02-25 11:38:14] -rw-r--r--. 2 boincer umatlas     15845 Feb 25 05:19 start_atlas.sh
[2026-02-25 11:38:14] drwxrwx--x. 2 boincer umatlas      4096 Feb 25 05:19 shared
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas         0 Feb 25 05:19 boinc_lockfile
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas      2529 Feb 25 05:19 pandaJob.out
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas        57 Feb 25 05:19 setup.sh.local
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas    995649 Feb 25 05:19 agis_schedconf.cvmfs.json
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas       433 Feb 25 05:20 workernode_map.json
[2026-02-25 11:38:14] drwx------. 5 boincer umatlas      4096 Feb 25 05:20 pilot3
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas      6660 Feb 25 11:36 init_data.xml
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas 184239325 Feb 25 11:36 HITS.48318010._018994.pool.root.1
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas       531 Feb 25 11:36 boinc_task_state.xml
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas      1041 Feb 25 11:37 memory_monitor_summary.json
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas   1513015 Feb 25 11:37 agis_ddmendpoints.agis.ALL.json
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas    629546 Feb 25 11:37 log.48318010._018994.job.log.tgz.1
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas      6383 Feb 25 11:37 heartbeat.json
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas        95 Feb 25 11:38 pilot_heartbeat.json
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas        28 Feb 25 11:38 wrapper_checkpoint.txt
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas      8192 Feb 25 11:38 boinc_mmap_file
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas      5005 Feb 25 11:38 pilotlog.txt
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas   2423146 Feb 25 11:38 log.48318010._018994.job.log.1
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas       357 Feb 25 11:38 output.list
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas       620 Feb 25 11:38 runtime_log
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas   3072000 Feb 25 11:38 result.tar.gz
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas      9334 Feb 25 11:38 runtime_log.err
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas       655 Feb 25 11:38 MFOMDmIaMD9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNKyKDmHhh2cm.diag
[2026-02-25 11:38:14] -rw-r--r--. 1 boincer umatlas     21352 Feb 25 11:38 stderr.txt
[2026-02-25 11:38:14] HITS file was successfully produced:
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas 184239325 Feb 25 11:36 shared/HITS.pool.root.1
[2026-02-25 11:38:14]  *** Contents of shared directory: ***
[2026-02-25 11:38:14] total 668060
[2026-02-25 11:38:14] -rw-r--r--. 2 boincer umatlas 496153901 Feb 25 05:19 ATLAS.root_0
[2026-02-25 11:38:14] -rw-r--r--. 2 boincer umatlas    597952 Feb 25 05:19 input.tar.gz
[2026-02-25 11:38:14] -rw-r--r--. 2 boincer umatlas     15845 Feb 25 05:19 start_atlas.sh
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas 184239325 Feb 25 11:36 HITS.pool.root.1
[2026-02-25 11:38:14] -rw-------. 1 boincer umatlas   3072000 Feb 25 11:38 result.tar.gz
11:38:15 (188778): run_atlas exited; CPU time 50460.247049
11:38:15 (188778): called boinc_finish(0)

</stderr_txt>
]]>

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