Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:47:40 (55547): wrapper (7.7.26015): starting
16:47:40 (55547): wrapper: running run_atlas (--nthreads 4)
[2026-02-24 16:47:40] Arguments: --nthreads 4
[2026-02-24 16:47:40] Threads: 4
[2026-02-24 16:47:40] Checking for CVMFS
[2026-02-24 16:47:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-24 16:47:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-24 16:47:42] Running cvmfs_config stat atlas.cern.ch
[2026-02-24 16:47:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-24 16:47:42] 2.9.2.0 55743 0 30036 156574 3 1 27324843 36864001 0 130560 0 0 0.000 1336 7722 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-24 16:47:42] CVMFS is ok
[2026-02-24 16:47:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-24 16:47:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-24 16:47:42] Further information can be found at the LHC@home message board.
[2026-02-24 16:47:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-24 16:47:42] Checking for apptainer binary...
[2026-02-24 16:47:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-24 16:47:42] Running /usr/bin/apptainer --version
[2026-02-24 16:47:42] apptainer version 1.4.1-1.1
[2026-02-24 16:47:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-24 16:47:42] thA375a
[2026-02-24 16:47:42] apptainer works
[2026-02-24 16:47:42] Set ATHENA_PROC_NUMBER=4
[2026-02-24 16:47:42] Set ATHENA_CORE_NUMBER=4
[2026-02-24 16:47:42] Starting ATLAS job with PandaID=7014507984
[2026-02-24 16:47:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-24 18:35:10]  *** The last 200 lines of the pilot log: ***
[2026-02-24 18:35:10] 2026-02-24 17:34:17,724 | INFO     | all job control threads have been joined
[2026-02-24 18:35:10] 2026-02-24 17:34:18,081 | INFO     | [job] retrieve thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:18,081 | INFO     | [job] queue monitor thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:18,142 | INFO     | [payload] control thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:18,382 | INFO     | [data] control thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:18,676 | WARNING  | process 64396 can no longer be monitored (due to stat problems) - aborting
[2026-02-24 18:35:10] 2026-02-24 17:34:18,706 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-24 18:35:10] 2026-02-24 17:34:18,707 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-24 18:35:10] 2026-02-24 17:34:18,707 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-24 18:35:10] 2026-02-24 17:34:18,707 | WARNING  | maxPSS not found in memory monitor output
[2026-02-24 18:35:10] 2026-02-24 17:34:18,707 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-7014507984/payload.stdout) since it has not been created yet
[2026-02-24 18:35:10] 2026-02-24 17:34:18,707 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-24 18:35:10] 2026-02-24 17:34:18,722 | INFO     | sufficient remaining disk space (232963178496 B)
[2026-02-24 18:35:10] 2026-02-24 17:34:18,722 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-24 18:35:10] 2026-02-24 17:34:18,723 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-7014507984/HITS.48508763._012610.pool.root.1 since it does not exist
[2026-02-24 18:35:10] 2026-02-24 17:34:18,729 | INFO     | [job] control thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:18,762 | INFO     | number of running child processes to parent process 64396: 1
[2026-02-24 18:35:10] 2026-02-24 17:34:18,762 | INFO     | maximum number of monitored processes: 6
[2026-02-24 18:35:10] 2026-02-24 17:34:18,762 | INFO     | aborting job monitoring since job object (job id=7014507984) has expired
[2026-02-24 18:35:10] 2026-02-24 17:34:18,762 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-24 18:35:10] 2026-02-24 17:34:18,762 | INFO     | will abort loop
[2026-02-24 18:35:10] 2026-02-24 17:34:18,847 | INFO     | [job] validate thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:18,941 | INFO     | [payload] execute_payloads thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:18,943 | INFO     | [payload] failed_post thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:19,009 | INFO     | [job] create_data_payload thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:19,097 | INFO     | [payload] validate_pre thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:19,271 | INFO     | [data] copytool_in thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:19,421 | INFO     | [payload] validate_post thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:19,490 | INFO     | [data] copytool_out thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:19,767 | INFO     | [job] job monitor thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:20,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-24 18:35:10] 2026-02-24 17:34:24,526 | INFO     | [data] queue_monitor thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:27,607 | INFO     | job.realtimelogging is not enabled
[2026-02-24 18:35:10] 2026-02-24 17:34:28,613 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-24 18:35:10] 2026-02-24 17:34:47,030 | INFO     | PID=59880 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-24 18:35:10] 2026-02-24 17:34:47,031 | INFO     | found 0 job(s) in 20 queues
[2026-02-24 18:35:10] 2026-02-24 17:34:47,031 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-24 18:35:10] 2026-02-24 17:34:47,031 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-24 18:35:10] 2026-02-24 17:35:04,255 | INFO     | [monitor] cgroup control has ended
[2026-02-24 18:35:10] 2026-02-24 17:35:05,622 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140090819213120)>', '<ExcThread(monitor, started 140089720026880)>']
[2026-02-24 18:35:10] 2026-02-24 17:35:06,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-24 18:35:10] 2026-02-24 17:35:06,131 | INFO     | [monitor] control thread has ended
[2026-02-24 18:35:10] 2026-02-24 17:35:10,648 | INFO     | all workflow threads have been joined
[2026-02-24 18:35:10] 2026-02-24 17:35:10,648 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-24 18:35:10] 2026-02-24 17:35:10,649 | INFO     | traces error code: 0
[2026-02-24 18:35:10] 2026-02-24 17:35:10,649 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-24 18:35:10] 2026-02-24 17:35:10,728 [wrapper] ==== pilot stdout END ====
[2026-02-24 18:35:10] 2026-02-24 17:35:10,732 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-24 18:35:10] 2026-02-24 17:35:10,736 [wrapper] pilotpid: 59880
[2026-02-24 18:35:10] 2026-02-24 17:35:10,741 [wrapper] Pilot exit status: 0
[2026-02-24 18:35:10] 2026-02-24 17:35:10,753 [wrapper] pandaids: 7014507984
[2026-02-24 18:35:10] 2026-02-24 17:35:10,776 [wrapper] cleanup supervisor_pilot   69805 59881
[2026-02-24 18:35:10] 2026-02-24 17:35:10,780 [wrapper] Test setup, not cleaning
[2026-02-24 18:35:10] 2026-02-24 17:35:10,784 [wrapper] apfmon messages muted
[2026-02-24 18:35:10] 2026-02-24 17:35:10,788 [wrapper] ==== wrapper stdout END ====
[2026-02-24 18:35:10] 2026-02-24 17:35:10,792 [wrapper] ==== wrapper stderr END ====
[2026-02-24 18:35:10]  *** Error codes and diagnostics ***
[2026-02-24 18:35:10]     "exeErrorCode": 0,
[2026-02-24 18:35:10]     "exeErrorDiag": "",
[2026-02-24 18:35:10]     "pilotErrorCode": 0,
[2026-02-24 18:35:10]     "pilotErrorDiag": "",
[2026-02-24 18:35:10]  *** Listing of results directory ***
[2026-02-24 18:35:10] total 947744
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc    584627 Feb 16 15:40 pilot3.tar.gz
[2026-02-24 18:35:10] -rwx------ 1 boinc boinc     36322 Feb 16 15:42 runpilot2-wrapper.sh
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc      5111 Feb 16 15:43 queuedata.json
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc       100 Feb 24 16:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-24 18:35:10] -rwxr-xr-x 1 boinc boinc      7986 Feb 24 16:47 run_atlas
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc       105 Feb 24 16:47 job.xml
[2026-02-24 18:35:10] -rw-r--r-- 2 boinc boinc 684767285 Feb 24 16:47 EVNT.48508760._000249.pool.root.1
[2026-02-24 18:35:10] -rw-r--r-- 2 boinc boinc    597946 Feb 24 16:47 input.tar.gz
[2026-02-24 18:35:10] -rw-r--r-- 2 boinc boinc     15845 Feb 24 16:47 start_atlas.sh
[2026-02-24 18:35:10] drwxrwx--x 2 boinc boinc      4096 Feb 24 16:47 shared
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc         0 Feb 24 16:47 boinc_setup_complete
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc      6377 Feb 24 16:47 init_data.xml
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc         0 Feb 24 16:47 boinc_lockfile
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc      2549 Feb 24 16:47 pandaJob.out
[2026-02-24 18:35:10] -rw------- 1 boinc boinc    997232 Feb 24 16:47 agis_schedconf.cvmfs.json
[2026-02-24 18:35:10] -rw------- 1 boinc boinc   1513015 Feb 24 16:47 agis_ddmendpoints.agis.ALL.json
[2026-02-24 18:35:10] -rw------- 1 boinc boinc       428 Feb 24 16:47 workernode_map.json
[2026-02-24 18:35:10] drwx------ 5 boinc boinc      4096 Feb 24 16:47 pilot3
[2026-02-24 18:35:10] -rw------- 1 boinc boinc 279404929 Feb 24 18:33 HITS.48508763._012610.pool.root.1
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc       530 Feb 24 18:33 boinc_task_state.xml
[2026-02-24 18:35:10] -rw------- 1 boinc boinc      1017 Feb 24 18:34 memory_monitor_summary.json
[2026-02-24 18:35:10] -rw------- 1 boinc boinc    276755 Feb 24 18:34 log.48508763._012610.job.log.tgz.1
[2026-02-24 18:35:10] -rw------- 1 boinc boinc      6315 Feb 24 18:34 heartbeat.json
[2026-02-24 18:35:10] -rw------- 1 boinc boinc        95 Feb 24 18:34 pilot_heartbeat.json
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc        27 Feb 24 18:34 wrapper_checkpoint.txt
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc      8192 Feb 24 18:34 boinc_mmap_file
[2026-02-24 18:35:10] -rw------- 1 boinc boinc      6315 Feb 24 18:35 pilotlog.txt
[2026-02-24 18:35:10] -rw------- 1 boinc boinc    920684 Feb 24 18:35 log.48508763._012610.job.log.1
[2026-02-24 18:35:10] -rw------- 1 boinc boinc       357 Feb 24 18:35 output.list
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc       620 Feb 24 18:35 runtime_log
[2026-02-24 18:35:10] -rw------- 1 boinc boinc   1218560 Feb 24 18:35 result.tar.gz
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc      8901 Feb 24 18:35 runtime_log.err
[2026-02-24 18:35:10] -rw------- 1 boinc boinc       658 Feb 24 18:35 UyQNDmkyEC9n9Rq4apOajLDm4fhM0noT9bVooX4SDmFCrKDmdCa8Vo.diag
[2026-02-24 18:35:10] -rw-r--r-- 1 boinc boinc      8587 Feb 24 18:35 stderr.txt
[2026-02-24 18:35:10] HITS file was successfully produced:
[2026-02-24 18:35:10] -rw------- 1 boinc boinc 279404929 Feb 24 18:33 shared/HITS.pool.root.1
[2026-02-24 18:35:10]  *** Contents of shared directory: ***
[2026-02-24 18:35:10] total 943380
[2026-02-24 18:35:10] -rw-r--r-- 2 boinc boinc 684767285 Feb 24 16:47 ATLAS.root_0
[2026-02-24 18:35:10] -rw-r--r-- 2 boinc boinc    597946 Feb 24 16:47 input.tar.gz
[2026-02-24 18:35:10] -rw-r--r-- 2 boinc boinc     15845 Feb 24 16:47 start_atlas.sh
[2026-02-24 18:35:10] -rw------- 1 boinc boinc 279404929 Feb 24 18:33 HITS.pool.root.1
[2026-02-24 18:35:10] -rw------- 1 boinc boinc   1218560 Feb 24 18:35 result.tar.gz
18:35:12 (55547): run_atlas exited; CPU time 24384.626148
18:35:12 (55547): called boinc_finish(0)

</stderr_txt>
]]>

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