Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
02:30:08 (130371): wrapper (7.7.26015): starting
02:30:08 (130371): wrapper: running run_atlas (--nthreads 4)
[2026-02-24 02:30:08] Arguments: --nthreads 4
[2026-02-24 02:30:08] Threads: 4
[2026-02-24 02:30:08] Checking for CVMFS
[2026-02-24 02:30:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-24 02:30:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-24 02:30:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-24 02:30:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-24 02:30:08] 2.13.3.0 57993 3 45324 156567 1 188 3094807 4096001 3209 130560 0 180105 99.992 434 144 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-24 02:30:08] CVMFS is ok
[2026-02-24 02:30:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-24 02:30:08] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-24 02:30:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-24 02:30:08] Further information can be found at the LHC@home message board.
[2026-02-24 02:30:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-24 02:30:08] Checking for apptainer binary...
[2026-02-24 02:30:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-24 02:30:08] Running /usr/bin/apptainer --version
[2026-02-24 02:30:08] apptainer version 1.4.5
[2026-02-24 02:30:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-24 02:30:08] x11dain
[2026-02-24 02:30:08] apptainer works
[2026-02-24 02:30:08] Set ATHENA_PROC_NUMBER=4
[2026-02-24 02:30:08] Set ATHENA_CORE_NUMBER=4
[2026-02-24 02:30:08] Starting ATLAS job with PandaID=7028756077
[2026-02-24 02:30:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-24 03:43:36]  *** The last 200 lines of the pilot log: ***
[2026-02-24 03:43:36]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-24 03:43:36]  is_altstaged=None
[2026-02-24 03:43:36]  is_tar=False
[2026-02-24 03:43:36]  lfn=log.48700946._000884.job.log.tgz.1
[2026-02-24 03:43:36]  mtime=0
[2026-02-24 03:43:36]  protocol_id=None
[2026-02-24 03:43:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-24 03:43:36]  replicas=None
[2026-02-24 03:43:36]  scope=mc23_13p6TeV
[2026-02-24 03:43:36]  status=None
[2026-02-24 03:43:36]  status_code=0
[2026-02-24 03:43:36]  storage_token=
[2026-02-24 03:43:36]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-7028756077/log.48700946._000884.job.log.tgz.1
[2026-02-24 03:43:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/f3/log.48700946._000884.job.log.tgz.1
[2026-02-24 03:43:36]  workdir=None
[2026-02-24 03:43:36] ]
[2026-02-24 03:43:36] 2026-02-24 10:43:00,971 | INFO     | time since job start (4357s) is within the limit (349056.0s)
[2026-02-24 03:43:36] 2026-02-24 10:43:00,978 | INFO     | transferring file log.48700946._000884.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-7028756077/log.48700946._000884.job.log.tgz.1 to /var/lib/boinc
[2026-02-24 03:43:36] 2026-02-24 10:43:00,978 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-7028756077/log.48700946._000884.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.487009
[2026-02-24 03:43:36] 2026-02-24 10:43:00,994 | INFO     | adding to output.list: log.48700946._000884.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b2/f3/log.48700946._000884.job.log.tg
[2026-02-24 03:43:36] 2026-02-24 10:43:00,995 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-24 03:43:36] 2026-02-24 10:43:00,995 | INFO     | summary of transferred files:
[2026-02-24 03:43:36] 2026-02-24 10:43:00,995 | INFO     |  -- lfn=log.48700946._000884.job.log.tgz.1, status_code=0, status=transferred
[2026-02-24 03:43:36] 2026-02-24 10:43:00,995 | INFO     | stage-out finished correctly
[2026-02-24 03:43:36] 2026-02-24 10:43:01,144 | INFO     | number of running child processes to parent process 163797: 1
[2026-02-24 03:43:36] 2026-02-24 10:43:01,145 | INFO     | maximum number of monitored processes: 6
[2026-02-24 03:43:36] 2026-02-24 10:43:02,984 | INFO     | time since job start (4359s) is within the limit (349056.0s)
[2026-02-24 03:43:36] 2026-02-24 10:43:03,648 | INFO     | monitor loop #328: job 0:7028756077 is in state 'finished'
[2026-02-24 03:43:36] 2026-02-24 10:43:03,648 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-24 03:43:36] 2026-02-24 10:43:04,203 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-24 03:43:36] 2026-02-24 10:43:04,311 | INFO     | job 7028756077 has state=finished
[2026-02-24 03:43:36] 2026-02-24 10:43:04,311 | INFO     | preparing for final server update for job 7028756077 in state='finished'
[2026-02-24 03:43:36] 2026-02-24 10:43:04,312 | INFO     | reading metadata from: /var/lib/boinc-client/slots/7/PanDA_Pilot-7028756077/jobReport.json
[2026-02-24 03:43:36] 2026-02-24 10:43:04,315 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/7/workernode_map.json
[2026-02-24 03:43:36] 2026-02-24 10:43:04,316 | INFO     | this job has now completed (state=finished)
[2026-02-24 03:43:36] 2026-02-24 10:43:04,316 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-24 03:43:36] 2026-02-24 10:43:04,316 | INFO     | log transfer has been attempted: DONE
[2026-02-24 03:43:36] 2026-02-24 10:43:04,316 | INFO     | job 7028756077 has finished - writing final server update
[2026-02-24 03:43:36] 2026-02-24 10:43:04,317 | INFO     | total number of processed events: 400 (read)
[2026-02-24 03:43:36] 2026-02-24 10:43:04,346 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-7028756077/memory_monitor_summary.json (trf name=prmon)
[2026-02-24 03:43:36] 2026-02-24 10:43:04,346 | INFO     | extracted standard info from prmon json
[2026-02-24 03:43:36] 2026-02-24 10:43:04,347 | INFO     | extracted standard memory fields from prmon json
[2026-02-24 03:43:36] 2026-02-24 10:43:04,347 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-24 03:43:36] 2026-02-24 10:43:04,347 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-24 03:43:36] 2026-02-24 10:43:04,347 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-24 03:43:36] 2026-02-24 10:43:04,349 | INFO     | fitting pss+swap vs Time
[2026-02-24 03:43:36] 2026-02-24 10:43:04,350 | INFO     | sum of square deviations: 85136480.0
[2026-02-24 03:43:36] 2026-02-24 10:43:04,350 | INFO     | sum of deviations: -729811442.0
[2026-02-24 03:43:36] 2026-02-24 10:43:04,351 | INFO     | mean x: 1771927701.0
[2026-02-24 03:43:36] 2026-02-24 10:43:04,351 | INFO     | mean y: 2327667.8615384614
[2026-02-24 03:43:36] 2026-02-24 10:43:04,351 | INFO     | intersect: 15191740133.429235
[2026-02-24 03:43:36] 2026-02-24 10:43:04,351 | INFO     | chi2: 0.0027366756951497434
[2026-02-24 03:43:36] 2026-02-24 10:43:04,351 | INFO     | current memory leak: -8.57 B/s (using 65 data points, chi2=0.00)
[2026-02-24 03:43:36] 2026-02-24 10:43:04,352 | INFO     | could have reported an average CPU frequency of 1951 MHz (6 samples)
[2026-02-24 03:43:36] 2026-02-24 10:43:04,352 | INFO     | ..............................
[2026-02-24 03:43:36] 2026-02-24 10:43:04,352 | INFO     | . Timing measurements:
[2026-02-24 03:43:36] 2026-02-24 10:43:04,352 | INFO     | . get job = 0 s
[2026-02-24 03:43:36] 2026-02-24 10:43:04,352 | INFO     | . initial setup = 6 s
[2026-02-24 03:43:36] 2026-02-24 10:43:04,352 | INFO     | . payload setup = 5 s
[2026-02-24 03:43:36] 2026-02-24 10:43:04,352 | INFO     | . stage-in = 0 s
[2026-02-24 03:43:36] 2026-02-24 10:43:04,353 | INFO     | . payload execution = 4336 s
[2026-02-24 03:43:36] 2026-02-24 10:43:04,353 | INFO     | . stage-out = 0 s
[2026-02-24 03:43:36] 2026-02-24 10:43:04,353 | INFO     | . log creation = 0 s
[2026-02-24 03:43:36] 2026-02-24 10:43:04,353 | INFO     | ..............................
[2026-02-24 03:43:36] 2026-02-24 10:43:04,437 | INFO     | 
[2026-02-24 03:43:36] 2026-02-24 10:43:04,437 | INFO     | job summary report
[2026-02-24 03:43:36] 2026-02-24 10:43:04,437 | INFO     | --------------------------------------------------
[2026-02-24 03:43:36] 2026-02-24 10:43:04,437 | INFO     | PanDA job id: 7028756077
[2026-02-24 03:43:36] 2026-02-24 10:43:04,438 | INFO     | task id: 48700946
[2026-02-24 03:43:36] 2026-02-24 10:43:04,438 | INFO     | errors: (none)
[2026-02-24 03:43:36] 2026-02-24 10:43:04,438 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-24 03:43:36] 2026-02-24 10:43:04,438 | INFO     | pilot state: finished 
[2026-02-24 03:43:36] 2026-02-24 10:43:04,438 | INFO     | transexitcode: 0
[2026-02-24 03:43:36] 2026-02-24 10:43:04,438 | INFO     | exeerrorcode: 0
[2026-02-24 03:43:36] 2026-02-24 10:43:04,438 | INFO     | exeerrordiag: 
[2026-02-24 03:43:36] 2026-02-24 10:43:04,438 | INFO     | exitcode: 0
[2026-02-24 03:43:36] 2026-02-24 10:43:04,438 | INFO     | exitmsg: OK
[2026-02-24 03:43:36] 2026-02-24 10:43:04,439 | INFO     | cpuconsumptiontime: 16604 s
[2026-02-24 03:43:36] 2026-02-24 10:43:04,439 | INFO     | nevents: 400
[2026-02-24 03:43:36] 2026-02-24 10:43:04,439 | INFO     | neventsw: 0
[2026-02-24 03:43:36] 2026-02-24 10:43:04,439 | INFO     | pid: 163797
[2026-02-24 03:43:36] 2026-02-24 10:43:04,439 | INFO     | pgrp: 163797
[2026-02-24 03:43:36] 2026-02-24 10:43:04,439 | INFO     | corecount: 4
[2026-02-24 03:43:36] 2026-02-24 10:43:04,439 | INFO     | event service: False
[2026-02-24 03:43:36] 2026-02-24 10:43:04,439 | INFO     | sizes: {0: 2281933, 1: 2282195, 11: 2282223, 4346: 2308282, 4347: 2317294, 4350: 2317672}
[2026-02-24 03:43:36] 2026-02-24 10:43:04,439 | INFO     | --------------------------------------------------
[2026-02-24 03:43:36] 2026-02-24 10:43:04,440 | INFO     | 
[2026-02-24 03:43:36] 2026-02-24 10:43:04,440 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2026-02-24 03:43:36] 2026-02-24 10:43:04,460 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,461 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,461 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,461 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,461 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,462 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,462 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,462 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,462 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,462 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,462 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,462 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,463 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,463 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,463 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,463 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,463 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-24 03:43:36] 2026-02-24 10:43:04,463 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,463 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-24 03:43:36] 2026-02-24 10:43:04,464 | INFO     | job 7028756077 has completed (purged errors)
[2026-02-24 03:43:36] 2026-02-24 10:43:04,464 | INFO     | overall cleanup function is called
[2026-02-24 03:43:36] 2026-02-24 10:43:05,473 | INFO     | --- collectZombieJob: --- 10, [163797]
[2026-02-24 03:43:36] 2026-02-24 10:43:05,474 | INFO     | zombie collector waiting for pid 163797
[2026-02-24 03:43:36] 2026-02-24 10:43:05,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-24 03:43:36] 2026-02-24 10:43:05,474 | INFO     | collected zombie processes
[2026-02-24 03:43:36] 2026-02-24 10:43:05,474 | INFO     | will attempt to kill all subprocesses of pid=163797
[2026-02-24 03:43:36] 2026-02-24 10:43:05,618 | INFO     | process IDs to be killed: [163797] (in reverse order)
[2026-02-24 03:43:36] 2026-02-24 10:43:05,687 | WARNING  | found no corresponding commands to process id(s)
[2026-02-24 03:43:36] 2026-02-24 10:43:05,687 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-24 03:43:36] 2026-02-24 10:43:05,693 | INFO     | did not find any defunct processes belonging to 163797
[2026-02-24 03:43:36] 2026-02-24 10:43:05,699 | INFO     | did not find any defunct processes belonging to 163797
[2026-02-24 03:43:36] 2026-02-24 10:43:05,699 | INFO     | ready for new job
[2026-02-24 03:43:36] 2026-02-24 10:43:05,699 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-24 03:43:36] 2026-02-24 10:43:05,700 | INFO     | **************************************
[2026-02-24 03:43:36] 2026-02-24 10:43:05,700 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-24 03:43:36] 2026-02-24 10:43:05,700 | INFO     | **************************************
[2026-02-24 03:43:36] 2026-02-24 10:43:05,701 | INFO     | 
[2026-02-24 03:43:36] 2026-02-24 10:43:05,704 | INFO     | architecture information:
[2026-02-24 03:43:36] 2026-02-24 10:43:05,705 | INFO     | executing command: cat /etc/os-release
[2026-02-24 03:43:36] 2026-02-24 10:43:05,716 | INFO     | cat /etc/os-release:
[2026-02-24 03:43:36] NAME="CentOS Linux"
[2026-02-24 03:43:36] VERSION="7 (Core)"
[2026-02-24 03:43:36] ID="centos"
[2026-02-24 03:43:36] ID_LIKE="rhel fedora"
[2026-02-24 03:43:36] VERSION_ID="7"
[2026-02-24 03:43:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-24 03:43:36] ANSI_COLOR="0;31"
[2026-02-24 03:43:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-24 03:43:36] HOME_URL="https://www.centos.org/"
[2026-02-24 03:43:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-24 03:43:36] 
[2026-02-24 03:43:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-24 03:43:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-24 03:43:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-24 03:43:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-24 03:43:36] 
[2026-02-24 03:43:36] 2026-02-24 10:43:05,717 | INFO     | **************************************
[2026-02-24 03:43:36] 2026-02-24 10:43:06,219 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2026-02-24 03:43:36] 2026-02-24 10:43:06,235 | INFO     | sufficient remaining disk space (360366211072 B)
[2026-02-24 03:43:36] 2026-02-24 10:43:06,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-24 03:43:36] 2026-02-24 10:43:06,236 | INFO     | current server update state: UPDATING_FINAL
[2026-02-24 03:43:36] 2026-02-24 10:43:06,236 | INFO     | update_server=False
[2026-02-24 03:43:36] 2026-02-24 10:43:06,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-24 03:43:36] 2026-02-24 10:43:06,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-24 03:43:36] 2026-02-24 10:43:06,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-24 03:43:36] 2026-02-24 10:43:06,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-24 03:43:36] 2026-02-24 10:43:07,053 | INFO     | all data control threads have been joined
[2026-02-24 03:43:36] 2026-02-24 10:43:07,083 | INFO     | all payload control threads have been joined
[2026-02-24 03:43:36] 2026-02-24 10:43:07,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-24 03:43:36] 2026-02-24 10:43:07,157 | INFO     | aborting loop
[2026-02-24 03:43:36] 2026-02-24 10:43:07,242 | INFO     | [job] retrieve thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:07,243 | INFO     | [job] queue monitor thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:07,444 | INFO     | [payload] validate_post thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:07,535 | INFO     | [data] copytool_in thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:07,797 | INFO     | [payload] failed_post thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:07,824 | INFO     | all job control threads have been joined
[2026-02-24 03:43:36] 2026-02-24 10:43:08,058 | INFO     | [data] control thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:08,088 | INFO     | [payload] control thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:08,163 | INFO     | [job] job monitor thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:08,170 | INFO     | [job] validate thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:08,410 | INFO     | [payload] execute_payloads thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:08,559 | INFO     | [data] copytool_out thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:08,607 | INFO     | [job] create_data_payload thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:08,709 | INFO     | [payload] validate_pre thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:08,830 | INFO     | [job] control thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:10,243 | INFO     | [data] queue_monitor thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:16,428 | INFO     | job.realtimelogging is not enabled
[2026-02-24 03:43:36] 2026-02-24 10:43:17,433 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-24 03:43:36] 2026-02-24 10:43:29,056 | INFO     | [monitor] cgroup control has ended
[2026-02-24 03:43:36] 2026-02-24 10:43:30,230 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125202042623808)>', '<ExcThread(monitor, started 125201534654208)>']
[2026-02-24 03:43:36] 2026-02-24 10:43:35,255 | INFO     | all workflow threads have been joined
[2026-02-24 03:43:36] 2026-02-24 10:43:35,256 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-24 03:43:36] 2026-02-24 10:43:35,256 | INFO     | traces error code: 0
[2026-02-24 03:43:36] 2026-02-24 10:43:35,257 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-24 03:43:36] 2026-02-24 10:43:36,395 | INFO     | PID=137714 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-24 03:43:36] 2026-02-24 10:43:36,395 | INFO     | .. there are 2 such processes running
[2026-02-24 03:43:36] 2026-02-24 10:43:36,395 | INFO     | found 0 job(s) in 20 queues
[2026-02-24 03:43:36] 2026-02-24 10:43:36,396 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-24 03:43:36] 2026-02-24 10:43:36,396 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-24 03:43:36] 2026-02-24 10:43:36,396 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-24 03:43:36] 2026-02-24 10:43:36,396 | INFO     | [monitor] control thread has ended
[2026-02-24 03:43:36] 2026-02-24 10:43:36,502 [wrapper] ==== pilot stdout END ====
[2026-02-24 03:43:36] 2026-02-24 10:43:36,506 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-24 03:43:36] 2026-02-24 10:43:36,509 [wrapper] pilotpid: 137714
[2026-02-24 03:43:36] 2026-02-24 10:43:36,512 [wrapper] Pilot exit status: 0
[2026-02-24 03:43:36] 2026-02-24 10:43:36,522 [wrapper] pandaids: 7028756077
[2026-02-24 03:43:36] 2026-02-24 10:43:36,565 [wrapper] cleanup supervisor_pilot  169601 137716
[2026-02-24 03:43:36] 2026-02-24 10:43:36,568 [wrapper] Test setup, not cleaning
[2026-02-24 03:43:36] 2026-02-24 10:43:36,571 [wrapper] apfmon messages muted
[2026-02-24 03:43:36] 2026-02-24 10:43:36,574 [wrapper] ==== wrapper stdout END ====
[2026-02-24 03:43:36] 2026-02-24 10:43:36,577 [wrapper] ==== wrapper stderr END ====
[2026-02-24 03:43:36]  *** Error codes and diagnostics ***
[2026-02-24 03:43:36]     "exeErrorCode": 0,
[2026-02-24 03:43:36]     "exeErrorDiag": "",
[2026-02-24 03:43:36]     "pilotErrorCode": 0,
[2026-02-24 03:43:36]     "pilotErrorDiag": "",
[2026-02-24 03:43:36]  *** Listing of results directory ***
[2026-02-24 03:43:36] total 332140
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc    584627 Feb 24 02:13 pilot3.tar.gz
[2026-02-24 03:43:36] -rwx------ 1 boinc boinc     36322 Feb 24 02:28 runpilot2-wrapper.sh
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc      5111 Feb 24 02:28 queuedata.json
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc       100 Feb 24 02:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-24 03:43:36] -rwxr-xr-x 1 boinc boinc      7986 Feb 24 02:30 run_atlas
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc       105 Feb 24 02:30 job.xml
[2026-02-24 03:43:36] -rw-r--r-- 2 boinc boinc 188693856 Feb 24 02:30 EVNT.48700944._000034.pool.root.1
[2026-02-24 03:43:36] -rw-r--r-- 2 boinc boinc     15845 Feb 24 02:30 start_atlas.sh
[2026-02-24 03:43:36] drwxrwx--x 2 boinc boinc      4096 Feb 24 02:30 shared
[2026-02-24 03:43:36] -rw-r--r-- 2 boinc boinc    597930 Feb 24 02:30 input.tar.gz
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc      9674 Feb 24 02:30 init_data.xml
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc         0 Feb 24 02:30 boinc_lockfile
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc      2497 Feb 24 02:30 pandaJob.out
[2026-02-24 03:43:36] -rw------- 1 boinc boinc    997227 Feb 24 02:30 agis_schedconf.cvmfs.json
[2026-02-24 03:43:36] -rw------- 1 boinc boinc   1513015 Feb 24 02:30 agis_ddmendpoints.agis.ALL.json
[2026-02-24 03:43:36] -rw------- 1 boinc boinc       433 Feb 24 02:30 workernode_map.json
[2026-02-24 03:43:36] drwx------ 5 boinc boinc      4096 Feb 24 02:30 pilot3
[2026-02-24 03:43:36] -rw------- 1 boinc boinc 145657109 Feb 24 03:42 HITS.48700946._000884.pool.root.1
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc       529 Feb 24 03:42 boinc_task_state.xml
[2026-02-24 03:43:36] -rw------- 1 boinc boinc      1029 Feb 24 03:42 memory_monitor_summary.json
[2026-02-24 03:43:36] -rw------- 1 boinc boinc    267800 Feb 24 03:43 log.48700946._000884.job.log.tgz.1
[2026-02-24 03:43:36] -rw------- 1 boinc boinc      6329 Feb 24 03:43 heartbeat.json
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc      8192 Feb 24 03:43 boinc_mmap_file
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc        27 Feb 24 03:43 wrapper_checkpoint.txt
[2026-02-24 03:43:36] -rw------- 1 boinc boinc       821 Feb 24 03:43 pilotlog.txt
[2026-02-24 03:43:36] -rw------- 1 boinc boinc        95 Feb 24 03:43 pilot_heartbeat.json
[2026-02-24 03:43:36] -rw------- 1 boinc boinc    648245 Feb 24 03:43 log.48700946._000884.job.log.1
[2026-02-24 03:43:36] -rw------- 1 boinc boinc       357 Feb 24 03:43 output.list
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc       620 Feb 24 03:43 runtime_log
[2026-02-24 03:43:36] -rw------- 1 boinc boinc    931840 Feb 24 03:43 result.tar.gz
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc      8918 Feb 24 03:43 runtime_log.err
[2026-02-24 03:43:36] -rw------- 1 boinc boinc       653 Feb 24 03:43 NgOKDmCt3E9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmrHzKDmQ8QS7m.diag
[2026-02-24 03:43:36] -rw-r--r-- 1 boinc boinc     21460 Feb 24 03:43 stderr.txt
[2026-02-24 03:43:36] HITS file was successfully produced:
[2026-02-24 03:43:36] -rw------- 1 boinc boinc 145657109 Feb 24 03:42 shared/HITS.pool.root.1
[2026-02-24 03:43:36]  *** Contents of shared directory: ***
[2026-02-24 03:43:36] total 328036
[2026-02-24 03:43:36] -rw-r--r-- 2 boinc boinc 188693856 Feb 24 02:30 ATLAS.root_0
[2026-02-24 03:43:36] -rw-r--r-- 2 boinc boinc     15845 Feb 24 02:30 start_atlas.sh
[2026-02-24 03:43:36] -rw-r--r-- 2 boinc boinc    597930 Feb 24 02:30 input.tar.gz
[2026-02-24 03:43:36] -rw------- 1 boinc boinc 145657109 Feb 24 03:42 HITS.pool.root.1
[2026-02-24 03:43:36] -rw------- 1 boinc boinc    931840 Feb 24 03:43 result.tar.gz
03:43:37 (130371): run_atlas exited; CPU time 16725.064968
03:43:37 (130371): called boinc_finish(0)

</stderr_txt>
]]>

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