Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:29:03 (22163): wrapper (7.7.26015): starting
22:29:03 (22163): wrapper: running run_atlas (--nthreads 12)
[2026-02-23 22:29:03] Arguments: --nthreads 12
[2026-02-23 22:29:03] Threads: 12
[2026-02-23 22:29:03] Checking for CVMFS
[2026-02-23 22:29:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-23 22:29:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-23 22:29:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-23 22:29:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-23 22:29:04] 2.11.2.0 25590 317424 99736 156562 0 188 13369705 20275200 1 130560 2 147693911 99.952 14736517 26296 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-23 22:29:04] CVMFS is ok
[2026-02-23 22:29:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-23 22:29:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-23 22:29:04] Further information can be found at the LHC@home message board.
[2026-02-23 22:29:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-23 22:29:04] Checking for apptainer binary...
[2026-02-23 22:29:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-23 22:29:04] Running /usr/bin/apptainer --version
[2026-02-23 22:29:04] apptainer version 1.3.2-1.el7
[2026-02-23 22:29:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-23 22:29:05] c-205-24.aglt2.org
[2026-02-23 22:29:05] apptainer works
[2026-02-23 22:29:05] Set ATHENA_PROC_NUMBER=12
[2026-02-23 22:29:05] Set ATHENA_CORE_NUMBER=12
[2026-02-23 22:29:05] Starting ATLAS job with PandaID=7017883694
[2026-02-23 22:29:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-24 00:16:42]  *** The last 200 lines of the pilot log: ***
[2026-02-24 00:16:42] 2026-02-24 05:15:54,800 | INFO     | extracted standard info from prmon json
[2026-02-24 00:16:42] 2026-02-24 05:15:54,800 | INFO     | extracted standard memory fields from prmon json
[2026-02-24 00:16:42] 2026-02-24 05:15:54,801 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-24 00:16:42] 2026-02-24 05:15:54,801 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-24 00:16:42] 2026-02-24 05:15:54,801 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-24 00:16:42] 2026-02-24 05:15:54,803 | INFO     | fitting pss+swap vs Time
[2026-02-24 00:16:42] 2026-02-24 05:15:54,803 | INFO     | sum of square deviations: 358927660.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,804 | INFO     | sum of deviations: 18962304084.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,804 | INFO     | mean x: 1771906962.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,804 | INFO     | mean y: 2948821.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,804 | INFO     | intersect: -93607665145.05832
[2026-02-24 00:16:42] 2026-02-24 05:15:54,804 | INFO     | chi2: 2.3315139190348195
[2026-02-24 00:16:42] 2026-02-24 05:15:54,804 | INFO     | sum of square deviations: 310052325.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,805 | INFO     | sum of deviations: 25915197727.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,805 | INFO     | mean x: 1771906809.5
[2026-02-24 00:16:42] 2026-02-24 05:15:54,805 | INFO     | mean y: 2969515.86
[2026-02-24 00:16:42] 2026-02-24 05:15:54,805 | INFO     | intersect: -148098855948.6329
[2026-02-24 00:16:42] 2026-02-24 05:15:54,805 | INFO     | chi2: 1.5802343776009153
[2026-02-24 00:16:42] 2026-02-24 05:15:54,806 | INFO     | current chi2=1.5802343776009153 (change=32.222820344341436 %)
[2026-02-24 00:16:42] 2026-02-24 05:15:54,806 | INFO     | sum of square deviations: 265828240.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,806 | INFO     | sum of deviations: 24476483386.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,806 | INFO     | mean x: 1771906657.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,806 | INFO     | mean y: 2964553.989473684
[2026-02-24 00:16:42] 2026-02-24 05:15:54,807 | INFO     | intersect: -163147661773.75998
[2026-02-24 00:16:42] 2026-02-24 05:15:54,807 | INFO     | chi2: 1.5786883863166854
[2026-02-24 00:16:42] 2026-02-24 05:15:54,807 | INFO     | current chi2=1.5786883863166854 (change=0.09783303705726482 %)
[2026-02-24 00:16:42] 2026-02-24 05:15:54,807 | INFO     | right removable region: 94
[2026-02-24 00:16:42] 2026-02-24 05:15:54,807 | INFO     | sum of square deviations: 310052325.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,808 | INFO     | sum of deviations: -2186996339.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,808 | INFO     | mean x: 1771907114.5
[2026-02-24 00:16:42] 2026-02-24 05:15:54,808 | INFO     | mean y: 3013755.14
[2026-02-24 00:16:42] 2026-02-24 05:15:54,808 | INFO     | intersect: 12501402123.811493
[2026-02-24 00:16:42] 2026-02-24 05:15:54,808 | INFO     | chi2: 0.856760285770023
[2026-02-24 00:16:42] 2026-02-24 05:15:54,808 | INFO     | current chi2=0.856760285770023 (change=63.25304864040026 %)
[2026-02-24 00:16:42] 2026-02-24 05:15:54,809 | INFO     | sum of square deviations: 265828240.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,809 | INFO     | sum of deviations: -6468198318.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,809 | INFO     | mean x: 1771907267.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,809 | INFO     | mean y: 3028183.8842105265
[2026-02-24 00:16:42] 2026-02-24 05:15:54,809 | INFO     | intersect: 43117512950.66962
[2026-02-24 00:16:42] 2026-02-24 05:15:54,810 | INFO     | chi2: 0.7790256597664548
[2026-02-24 00:16:42] 2026-02-24 05:15:54,810 | INFO     | current chi2=0.7790256597664548 (change=9.073089322027025 %)
[2026-02-24 00:16:42] 2026-02-24 05:15:54,810 | INFO     | left removable region: 20
[2026-02-24 00:16:42] 2026-02-24 05:15:54,810 | INFO     | sum of square deviations: 125630262.5
[2026-02-24 00:16:42] 2026-02-24 05:15:54,810 | INFO     | sum of deviations: 368360334.0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,810 | INFO     | mean x: 1771907236.5
[2026-02-24 00:16:42] 2026-02-24 05:15:54,811 | INFO     | mean y: 3057612.081081081
[2026-02-24 00:16:42] 2026-02-24 05:15:54,811 | INFO     | intersect: -5192349358.0679865
[2026-02-24 00:16:42] 2026-02-24 05:15:54,811 | INFO     | chi2: 3.9791549950181876e-05
[2026-02-24 00:16:42] 2026-02-24 05:15:54,811 | INFO     | current memory leak: 2.93 B/s (using 74 data points, chi2=0.00)
[2026-02-24 00:16:42] 2026-02-24 05:15:54,811 | INFO     | could have reported an average CPU frequency of 1795 MHz (7 samples)
[2026-02-24 00:16:42] 2026-02-24 05:15:54,812 | INFO     | ..............................
[2026-02-24 00:16:42] 2026-02-24 05:15:54,812 | INFO     | . Timing measurements:
[2026-02-24 00:16:42] 2026-02-24 05:15:54,812 | INFO     | . get job = 0 s
[2026-02-24 00:16:42] 2026-02-24 05:15:54,812 | INFO     | . initial setup = 7 s
[2026-02-24 00:16:42] 2026-02-24 05:15:54,812 | INFO     | . payload setup = 7 s
[2026-02-24 00:16:42] 2026-02-24 05:15:54,812 | INFO     | . stage-in = 0 s
[2026-02-24 00:16:42] 2026-02-24 05:15:54,812 | INFO     | . payload execution = 6365 s
[2026-02-24 00:16:42] 2026-02-24 05:15:54,812 | INFO     | . stage-out = 0 s
[2026-02-24 00:16:42] 2026-02-24 05:15:54,812 | INFO     | . log creation = 0 s
[2026-02-24 00:16:42] 2026-02-24 05:15:54,812 | INFO     | ..............................
[2026-02-24 00:16:42] 2026-02-24 05:15:54,890 | INFO     | 
[2026-02-24 00:16:42] 2026-02-24 05:15:54,890 | INFO     | job summary report
[2026-02-24 00:16:42] 2026-02-24 05:15:54,890 | INFO     | --------------------------------------------------
[2026-02-24 00:16:42] 2026-02-24 05:15:54,891 | INFO     | PanDA job id: 7017883694
[2026-02-24 00:16:42] 2026-02-24 05:15:54,892 | INFO     | task id: 48431096
[2026-02-24 00:16:42] 2026-02-24 05:15:54,892 | INFO     | errors: (none)
[2026-02-24 00:16:42] 2026-02-24 05:15:54,893 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-24 00:16:42] 2026-02-24 05:15:54,893 | INFO     | pilot state: finished 
[2026-02-24 00:16:42] 2026-02-24 05:15:54,893 | INFO     | transexitcode: 0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,894 | INFO     | exeerrorcode: 0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,894 | INFO     | exeerrordiag: 
[2026-02-24 00:16:42] 2026-02-24 05:15:54,894 | INFO     | exitcode: 0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,894 | INFO     | exitmsg: OK
[2026-02-24 00:16:42] 2026-02-24 05:15:54,894 | INFO     | cpuconsumptiontime: 70224 s
[2026-02-24 00:16:42] 2026-02-24 05:15:54,895 | INFO     | nevents: 400
[2026-02-24 00:16:42] 2026-02-24 05:15:54,895 | INFO     | neventsw: 0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,895 | INFO     | pid: 30234
[2026-02-24 00:16:42] 2026-02-24 05:15:54,896 | INFO     | pgrp: 30234
[2026-02-24 00:16:42] 2026-02-24 05:15:54,896 | INFO     | corecount: 12
[2026-02-24 00:16:42] 2026-02-24 05:15:54,896 | INFO     | event service: False
[2026-02-24 00:16:42] 2026-02-24 05:15:54,897 | INFO     | sizes: {0: 2281727, 1: 2282244, 12: 2282244, 6375: 2309242, 6376: 2318240, 6377: 2318618}
[2026-02-24 00:16:42] 2026-02-24 05:15:54,897 | INFO     | --------------------------------------------------
[2026-02-24 00:16:42] 2026-02-24 05:15:54,897 | INFO     | 
[2026-02-24 00:16:42] 2026-02-24 05:15:54,897 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-24 00:16:42] 2026-02-24 05:15:54,920 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,920 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,920 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,920 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,922 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,922 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,922 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,922 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,922 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,923 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,923 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,923 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-24 00:16:42] 2026-02-24 05:15:54,923 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,923 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-24 00:16:42] 2026-02-24 05:15:54,924 | INFO     | job 7017883694 has completed (purged errors)
[2026-02-24 00:16:42] 2026-02-24 05:15:54,924 | INFO     | overall cleanup function is called
[2026-02-24 00:16:42] 2026-02-24 05:15:54,992 | WARNING  | process 30234 can no longer be monitored (due to stat problems) - aborting
[2026-02-24 00:16:42] 2026-02-24 05:15:55,063 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-24 00:16:42] 2026-02-24 05:15:55,146 | INFO     | number of running child processes to parent process 30234: 1
[2026-02-24 00:16:42] 2026-02-24 05:15:55,146 | INFO     | maximum number of monitored processes: 6
[2026-02-24 00:16:42] 2026-02-24 05:15:55,146 | INFO     | aborting job monitoring since job object (job id=7017883694) has expired
[2026-02-24 00:16:42] 2026-02-24 05:15:55,932 | INFO     | --- collectZombieJob: --- 10, [30234]
[2026-02-24 00:16:42] 2026-02-24 05:15:55,932 | INFO     | zombie collector waiting for pid 30234
[2026-02-24 00:16:42] 2026-02-24 05:15:55,933 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-24 00:16:42] 2026-02-24 05:15:55,933 | INFO     | collected zombie processes
[2026-02-24 00:16:42] 2026-02-24 05:15:55,933 | INFO     | will attempt to kill all subprocesses of pid=30234
[2026-02-24 00:16:42] 2026-02-24 05:15:56,018 | INFO     | process IDs to be killed: [30234] (in reverse order)
[2026-02-24 00:16:42] 2026-02-24 05:15:56,073 | WARNING  | found no corresponding commands to process id(s)
[2026-02-24 00:16:42] 2026-02-24 05:15:56,074 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-24 00:16:42] 2026-02-24 05:15:56,077 | INFO     | did not find any defunct processes belonging to 30234
[2026-02-24 00:16:42] 2026-02-24 05:15:56,080 | INFO     | did not find any defunct processes belonging to 30234
[2026-02-24 00:16:42] 2026-02-24 05:15:56,080 | INFO     | ready for new job
[2026-02-24 00:16:42] 2026-02-24 05:15:56,080 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-24 00:16:42] 2026-02-24 05:15:56,081 | INFO     | **************************************
[2026-02-24 00:16:42] 2026-02-24 05:15:56,081 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-24 00:16:42] 2026-02-24 05:15:56,082 | INFO     | **************************************
[2026-02-24 00:16:42] 2026-02-24 05:15:56,082 | INFO     | 
[2026-02-24 00:16:42] 2026-02-24 05:15:56,082 | INFO     | architecture information:
[2026-02-24 00:16:42] 2026-02-24 05:15:56,083 | INFO     | executing command: cat /etc/os-release
[2026-02-24 00:16:42] 2026-02-24 05:15:56,099 | INFO     | cat /etc/os-release:
[2026-02-24 00:16:42] NAME="CentOS Linux"
[2026-02-24 00:16:42] VERSION="7 (Core)"
[2026-02-24 00:16:42] ID="centos"
[2026-02-24 00:16:42] ID_LIKE="rhel fedora"
[2026-02-24 00:16:42] VERSION_ID="7"
[2026-02-24 00:16:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-24 00:16:42] ANSI_COLOR="0;31"
[2026-02-24 00:16:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-24 00:16:42] HOME_URL="https://www.centos.org/"
[2026-02-24 00:16:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-24 00:16:42] 
[2026-02-24 00:16:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-24 00:16:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-24 00:16:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-24 00:16:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-24 00:16:42] 
[2026-02-24 00:16:42] 2026-02-24 05:15:56,099 | INFO     | **************************************
[2026-02-24 00:16:42] 2026-02-24 05:15:56,602 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-24 00:16:42] 2026-02-24 05:15:56,619 | INFO     | sufficient remaining disk space (28328329216 B)
[2026-02-24 00:16:42] 2026-02-24 05:15:56,619 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-24 00:16:42] 2026-02-24 05:15:56,619 | INFO     | current server update state: UPDATING_FINAL
[2026-02-24 00:16:42] 2026-02-24 05:15:56,619 | INFO     | update_server=False
[2026-02-24 00:16:42] 2026-02-24 05:15:56,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-24 00:16:42] 2026-02-24 05:15:56,620 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-24 00:16:42] 2026-02-24 05:15:56,620 | INFO     | aborting loop
[2026-02-24 00:16:42] 2026-02-24 05:15:56,620 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-24 00:16:42] 2026-02-24 05:15:56,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-24 00:16:42] 2026-02-24 05:15:57,016 | INFO     | all payload control threads have been joined
[2026-02-24 00:16:42] 2026-02-24 05:15:57,309 | INFO     | all data control threads have been joined
[2026-02-24 00:16:42] 2026-02-24 05:15:57,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-24 00:16:42] 2026-02-24 05:15:57,625 | INFO     | [job] retrieve thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:57,626 | INFO     | [job] job monitor thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:57,626 | INFO     | [job] queue monitor thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:57,646 | INFO     | all job control threads have been joined
[2026-02-24 00:16:42] 2026-02-24 05:15:57,726 | INFO     | [data] copytool_in thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:57,846 | INFO     | [payload] failed_post thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:58,022 | INFO     | [payload] control thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:58,314 | INFO     | [data] control thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:58,543 | INFO     | [job] create_data_payload thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:58,544 | INFO     | [job] validate thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:58,652 | INFO     | [job] control thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:58,844 | INFO     | [payload] validate_pre thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:58,854 | INFO     | [payload] execute_payloads thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:59,185 | INFO     | [payload] validate_post thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:15:59,341 | INFO     | [data] copytool_out thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:16:00,627 | INFO     | [data] queue_monitor thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:16:07,511 | INFO     | job.realtimelogging is not enabled
[2026-02-24 00:16:42] 2026-02-24 05:16:08,517 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-24 00:16:42] 2026-02-24 05:16:27,052 | INFO     | PID=25861 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-24 00:16:42] 2026-02-24 05:16:27,052 | INFO     | found 0 job(s) in 20 queues
[2026-02-24 00:16:42] 2026-02-24 05:16:27,053 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-24 00:16:42] 2026-02-24 05:16:27,053 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-24 00:16:42] 2026-02-24 05:16:35,912 | INFO     | [monitor] cgroup control has ended
[2026-02-24 00:16:42] 2026-02-24 05:16:36,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912009848640)>', '<ExcThread(monitor, started 139911302735616)>']
[2026-02-24 00:16:42] 2026-02-24 05:16:37,104 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-24 00:16:42] 2026-02-24 05:16:37,104 | INFO     | [monitor] control thread has ended
[2026-02-24 00:16:42] 2026-02-24 05:16:41,955 | INFO     | all workflow threads have been joined
[2026-02-24 00:16:42] 2026-02-24 05:16:41,955 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-24 00:16:42] 2026-02-24 05:16:41,955 | INFO     | traces error code: 0
[2026-02-24 00:16:42] 2026-02-24 05:16:41,956 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-24 00:16:42] 2026-02-24 05:16:42,042 [wrapper] ==== pilot stdout END ====
[2026-02-24 00:16:42] 2026-02-24 05:16:42,046 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-24 00:16:42] 2026-02-24 05:16:42,050 [wrapper] pilotpid: 25861
[2026-02-24 00:16:42] 2026-02-24 05:16:42,053 [wrapper] Pilot exit status: 0
[2026-02-24 00:16:42] 2026-02-24 05:16:42,068 [wrapper] pandaids: 7017883694
[2026-02-24 00:16:42] 2026-02-24 05:16:42,105 [wrapper] cleanup supervisor_pilot 26789 25862
[2026-02-24 00:16:42] 2026-02-24 05:16:42,109 [wrapper] Test setup, not cleaning
[2026-02-24 00:16:42] 2026-02-24 05:16:42,113 [wrapper] apfmon messages muted
[2026-02-24 00:16:42] 2026-02-24 05:16:42,117 [wrapper] ==== wrapper stdout END ====
[2026-02-24 00:16:42] 2026-02-24 05:16:42,121 [wrapper] ==== wrapper stderr END ====
[2026-02-24 00:16:42]  *** Error codes and diagnostics ***
[2026-02-24 00:16:42]     "exeErrorCode": 0,
[2026-02-24 00:16:42]     "exeErrorDiag": "",
[2026-02-24 00:16:42]     "pilotErrorCode": 0,
[2026-02-24 00:16:42]     "pilotErrorDiag": "",
[2026-02-24 00:16:42]  *** Listing of results directory ***
[2026-02-24 00:16:42] total 945136
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas    584627 Feb 15 15:13 pilot3.tar.gz
[2026-02-24 00:16:42] -rwx------ 1 boincer umatlas     36322 Feb 15 15:15 runpilot2-wrapper.sh
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas      5111 Feb 15 15:19 queuedata.json
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas       100 Feb 23 22:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-24 00:16:42] -rwxr-xr-x 1 boincer umatlas      7986 Feb 23 22:29 run_atlas
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas       105 Feb 23 22:29 job.xml
[2026-02-24 00:16:42] -rw-r--r-- 2 boincer umatlas 681351394 Feb 23 22:29 EVNT.48431094._000922.pool.root.1
[2026-02-24 00:16:42] -rw-r--r-- 2 boincer umatlas     15845 Feb 23 22:29 start_atlas.sh
[2026-02-24 00:16:42] drwxrwx--x 2 boincer umatlas      4096 Feb 23 22:29 shared
[2026-02-24 00:16:42] -rw-r--r-- 2 boincer umatlas    597958 Feb 23 22:29 input.tar.gz
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas         0 Feb 23 22:29 boinc_lockfile
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas      2557 Feb 23 22:29 pandaJob.out
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas        57 Feb 23 22:29 setup.sh.local
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas    997853 Feb 23 22:29 agis_schedconf.cvmfs.json
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas   1513015 Feb 23 22:29 agis_ddmendpoints.agis.ALL.json
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas       445 Feb 23 22:29 workernode_map.json
[2026-02-24 00:16:42] drwx------ 5 boincer umatlas      4096 Feb 23 22:29 pilot3
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas      5952 Feb 24 00:12 init_data.xml
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas 279883046 Feb 24 00:15 HITS.48431096._056190.pool.root.1
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas       530 Feb 24 00:15 boinc_task_state.xml
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas        95 Feb 24 00:15 pilot_heartbeat.json
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas      1043 Feb 24 00:15 memory_monitor_summary.json
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas    417698 Feb 24 00:15 log.48431096._056190.job.log.tgz.1
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas      6407 Feb 24 00:15 heartbeat.json
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas      8192 Feb 24 00:16 boinc_mmap_file
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas        27 Feb 24 00:16 wrapper_checkpoint.txt
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas      4814 Feb 24 00:16 pilotlog.txt
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas    911237 Feb 24 00:16 log.48431096._056190.job.log.1
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas       357 Feb 24 00:16 output.list
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas       620 Feb 24 00:16 runtime_log
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas   1341440 Feb 24 00:16 result.tar.gz
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas      9343 Feb 24 00:16 runtime_log.err
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas       658 Feb 24 00:16 86ZMDmfhxB9n9Rq4apOajLDm4fhM0noT9bVooX4SDmkqpKDmtrp2Jm.diag
[2026-02-24 00:16:42] -rw-r--r-- 1 boincer umatlas     20981 Feb 24 00:16 stderr.txt
[2026-02-24 00:16:42] HITS file was successfully produced:
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas 279883046 Feb 24 00:15 shared/HITS.pool.root.1
[2026-02-24 00:16:42]  *** Contents of shared directory: ***
[2026-02-24 00:16:42] total 940628
[2026-02-24 00:16:42] -rw-r--r-- 2 boincer umatlas 681351394 Feb 23 22:29 ATLAS.root_0
[2026-02-24 00:16:42] -rw-r--r-- 2 boincer umatlas     15845 Feb 23 22:29 start_atlas.sh
[2026-02-24 00:16:42] -rw-r--r-- 2 boincer umatlas    597958 Feb 23 22:29 input.tar.gz
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas 279883046 Feb 24 00:15 HITS.pool.root.1
[2026-02-24 00:16:42] -rw------- 1 boincer umatlas   1341440 Feb 24 00:16 result.tar.gz
00:16:43 (22163): run_atlas exited; CPU time 70209.427057
00:16:43 (22163): called boinc_finish(0)

</stderr_txt>
]]>

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