Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:46:02 (1310741): wrapper (7.7.26015): starting
13:46:02 (1310741): wrapper: running run_atlas (--nthreads 10)
[2026-02-23 13:46:02] Arguments: --nthreads 10
[2026-02-23 13:46:02] Threads: 10
[2026-02-23 13:46:02] Checking for CVMFS
[2026-02-23 13:46:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-23 13:46:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-23 13:46:02] Running cvmfs_config stat atlas.cern.ch
[2026-02-23 13:46:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-23 13:46:03] 2.13.3.0 7385 158524 345788 156562 3 832 20559050 32503808 64747 16776704 0 1796406594 99.618 1799253140 47656 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-23 13:46:03] CVMFS is ok
[2026-02-23 13:46:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-23 13:46:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-23 13:46:03] Further information can be found at the LHC@home message board.
[2026-02-23 13:46:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-23 13:46:03] Checking for apptainer binary...
[2026-02-23 13:46:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-23 13:46:03] Running /usr/bin/apptainer --version
[2026-02-23 13:46:04] apptainer version 1.4.5-2.el9
[2026-02-23 13:46:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-23 13:46:04] c8-7-1.aglt2.org
[2026-02-23 13:46:04] apptainer works
[2026-02-23 13:46:04] Set ATHENA_PROC_NUMBER=10
[2026-02-23 13:46:04] Set ATHENA_CORE_NUMBER=10
[2026-02-23 13:46:04] Starting ATLAS job with PandaID=7017658567
[2026-02-23 13:46:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-23 15:49:17]  *** The last 200 lines of the pilot log: ***
[2026-02-23 15:49:17] 2026-02-23 20:48:41,941 | INFO     | sum of square deviations: 509446167.49152595
[2026-02-23 15:49:17] 2026-02-23 20:48:41,941 | INFO     | sum of deviations: 70686714474.01694
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | mean x: 1771876140.5084746
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | mean y: 2903420.9830508474
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | intersect: -245848593399.8837
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | chi2: 5.7565114627549026
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | sum of square deviations: 447389494.9911509
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | sum of deviations: 76028755163.61061
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | mean x: 1771875988.0088496
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | mean y: 2915771.389380531
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | intersect: -301107251500.7993
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | chi2: 5.0842695821821735
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | current chi2=5.0842695821821735 (change=11.677938712051365 %)
[2026-02-23 15:49:17] 2026-02-23 20:48:41,942 | INFO     | right removable region: 112
[2026-02-23 15:49:17] 2026-02-23 20:48:41,943 | INFO     | sum of square deviations: 447388884.9911509
[2026-02-23 15:49:17] 2026-02-23 20:48:41,943 | INFO     | sum of deviations: 24665937484.92919
[2026-02-23 15:49:17] 2026-02-23 20:48:41,943 | INFO     | mean x: 1771876293.0088496
[2026-02-23 15:49:17] 2026-02-23 20:48:41,943 | INFO     | mean y: 3016334.0707964604
[2026-02-23 15:49:17] 2026-02-23 20:48:41,943 | INFO     | intersect: -97686021861.96936
[2026-02-23 15:49:17] 2026-02-23 20:48:41,943 | INFO     | chi2: 1.4951508856919733
[2026-02-23 15:49:17] 2026-02-23 20:48:41,943 | INFO     | current chi2=1.4951508856919733 (change=74.02678870066147 %)
[2026-02-23 15:49:17] 2026-02-23 20:48:41,943 | INFO     | sum of square deviations: 390587514.99074095
[2026-02-23 15:49:17] 2026-02-23 20:48:41,943 | INFO     | sum of deviations: 5801849586.962963
[2026-02-23 15:49:17] 2026-02-23 20:48:41,943 | INFO     | mean x: 1771876445.5092592
[2026-02-23 15:49:17] 2026-02-23 20:48:41,943 | INFO     | mean y: 3066573.037037037
[2026-02-23 15:49:17] 2026-02-23 20:48:41,944 | INFO     | intersect: -26316670307.879383
[2026-02-23 15:49:17] 2026-02-23 20:48:41,944 | INFO     | chi2: 0.8196241429484765
[2026-02-23 15:49:17] 2026-02-23 20:48:41,944 | INFO     | current chi2=0.8196241429484765 (change=45.18117530531744 %)
[2026-02-23 15:49:17] 2026-02-23 20:48:41,948 | INFO     | sum of square deviations: 338809494.99029166
[2026-02-23 15:49:17] 2026-02-23 20:48:41,952 | INFO     | sum of deviations: -170605396.29125977
[2026-02-23 15:49:17] 2026-02-23 20:48:41,952 | INFO     | mean x: 1771876598.0097086
[2026-02-23 15:49:17] 2026-02-23 20:48:41,952 | INFO     | mean y: 3084146.291262136
[2026-02-23 15:49:17] 2026-02-23 20:48:41,952 | INFO     | intersect: 895301494.5427257
[2026-02-23 15:49:17] 2026-02-23 20:48:41,952 | INFO     | chi2: 0.7663157185695952
[2026-02-23 15:49:17] 2026-02-23 20:48:41,952 | INFO     | current chi2=0.7663157185695952 (change=6.5040085553253855 %)
[2026-02-23 15:49:17] 2026-02-23 20:48:41,952 | INFO     | left removable region: 30
[2026-02-23 15:49:17] 2026-02-23 20:48:41,952 | INFO     | sum of square deviations: 170949054.4878044
[2026-02-23 15:49:17] 2026-02-23 20:48:41,952 | INFO     | sum of deviations: 585723121.8536587
[2026-02-23 15:49:17] 2026-02-23 20:48:41,952 | INFO     | mean x: 1771876872.512195
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | mean y: 3132387.1463414636
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | intersect: -6067853243.14961
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | chi2: 0.00013451973350491617
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | current memory leak: 3.43 B/s (using 82 data points, chi2=0.00)
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | could have reported an average CPU frequency of 3733 MHz (8 samples)
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | ..............................
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | . Timing measurements:
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | . get job = 0 s
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | . initial setup = 40 s
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | . payload setup = 51 s
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | . stage-in = 0 s
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | . payload execution = 7170 s
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | . stage-out = 1 s
[2026-02-23 15:49:17] 2026-02-23 20:48:41,953 | INFO     | . log creation = 0 s
[2026-02-23 15:49:17] 2026-02-23 20:48:41,954 | INFO     | ..............................
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | 
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | job summary report
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | --------------------------------------------------
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | PanDA job id: 7017658567
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | task id: 48431096
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | errors: (none)
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | pilot state: finished 
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | transexitcode: 0
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | exeerrorcode: 0
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | exeerrordiag: 
[2026-02-23 15:49:17] 2026-02-23 20:48:42,041 | INFO     | exitcode: 0
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | exitmsg: OK
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | cpuconsumptiontime: 34859 s
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | nevents: 400
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | neventsw: 0
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | pid: 1345263
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | pgrp: 1345263
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | corecount: 10
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | event service: False
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | sizes: {0: 2281677, 1: 2282134, 2: 2282222, 12: 2282222, 7225: 2309522, 7226: 2318520, 7228: 2318704, 7230: 2318898}
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | --------------------------------------------------
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | 
[2026-02-23 15:49:17] 2026-02-23 20:48:42,042 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-23 15:49:17] 2026-02-23 20:48:42,117 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,117 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,117 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,117 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,117 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,117 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,117 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | job 7017658567 has completed (purged errors)
[2026-02-23 15:49:17] 2026-02-23 20:48:42,118 | INFO     | overall cleanup function is called
[2026-02-23 15:49:17] 2026-02-23 20:48:43,138 | INFO     | --- collectZombieJob: --- 10, [1345263]
[2026-02-23 15:49:17] 2026-02-23 20:48:43,138 | INFO     | zombie collector waiting for pid 1345263
[2026-02-23 15:49:17] 2026-02-23 20:48:43,138 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-23 15:49:17] 2026-02-23 20:48:43,138 | INFO     | collected zombie processes
[2026-02-23 15:49:17] 2026-02-23 20:48:43,138 | INFO     | will attempt to kill all subprocesses of pid=1345263
[2026-02-23 15:49:17] 2026-02-23 20:48:43,457 | WARNING  | process 1345263 can no longer be monitored (due to stat problems) - aborting
[2026-02-23 15:49:17] 2026-02-23 20:48:44,587 | INFO     | process IDs to be killed: [1345263] (in reverse order)
[2026-02-23 15:49:17] 2026-02-23 20:48:44,605 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-02-23 15:49:17] 2026-02-23 20:48:44,606 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/2/PanDA_Pilot-7017658567/payload.stdout) since it has not been created yet
[2026-02-23 15:49:17] 2026-02-23 20:48:44,607 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-23 15:49:17] 2026-02-23 20:48:44,721 | INFO     | sufficient remaining disk space (95612305408 B)
[2026-02-23 15:49:17] 2026-02-23 20:48:44,721 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-23 15:49:17] 2026-02-23 20:48:44,721 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-7017658567/HITS.48431096._051444.pool.root.1 since it does not exist
[2026-02-23 15:49:17] 2026-02-23 20:48:44,954 | WARNING  | found no corresponding commands to process id(s)
[2026-02-23 15:49:17] 2026-02-23 20:48:44,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-23 15:49:17] 2026-02-23 20:48:45,059 | INFO     | did not find any defunct processes belonging to 1345263
[2026-02-23 15:49:17] 2026-02-23 20:48:45,157 | INFO     | did not find any defunct processes belonging to 1345263
[2026-02-23 15:49:17] 2026-02-23 20:48:45,158 | INFO     | ready for new job
[2026-02-23 15:49:17] 2026-02-23 20:48:45,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-23 15:49:17] 2026-02-23 20:48:45,159 | INFO     | **************************************
[2026-02-23 15:49:17] 2026-02-23 20:48:45,159 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-23 15:49:17] 2026-02-23 20:48:45,159 | INFO     | **************************************
[2026-02-23 15:49:17] 2026-02-23 20:48:45,159 | INFO     | 
[2026-02-23 15:49:17] 2026-02-23 20:48:45,186 | INFO     | architecture information:
[2026-02-23 15:49:17] 2026-02-23 20:48:45,195 | INFO     | executing command: cat /etc/os-release
[2026-02-23 15:49:17] 2026-02-23 20:48:45,217 | INFO     | cat /etc/os-release:
[2026-02-23 15:49:17] NAME="CentOS Linux"
[2026-02-23 15:49:17] VERSION="7 (Core)"
[2026-02-23 15:49:17] ID="centos"
[2026-02-23 15:49:17] ID_LIKE="rhel fedora"
[2026-02-23 15:49:17] VERSION_ID="7"
[2026-02-23 15:49:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-23 15:49:17] ANSI_COLOR="0;31"
[2026-02-23 15:49:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-23 15:49:17] HOME_URL="https://www.centos.org/"
[2026-02-23 15:49:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-23 15:49:17] 
[2026-02-23 15:49:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-23 15:49:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-23 15:49:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-23 15:49:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-23 15:49:17] 
[2026-02-23 15:49:17] 2026-02-23 20:48:45,218 | INFO     | **************************************
[2026-02-23 15:49:17] 2026-02-23 20:48:45,574 | INFO     | number of running child processes to parent process 1345263: 1
[2026-02-23 15:49:17] 2026-02-23 20:48:45,574 | INFO     | maximum number of monitored processes: 7
[2026-02-23 15:49:17] 2026-02-23 20:48:45,574 | INFO     | aborting job monitoring since job object (job id=7017658567) has expired
[2026-02-23 15:49:17] 2026-02-23 20:48:45,721 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-23 15:49:17] 2026-02-23 20:48:45,822 | INFO     | sufficient remaining disk space (95613353984 B)
[2026-02-23 15:49:17] 2026-02-23 20:48:45,822 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-23 15:49:17] 2026-02-23 20:48:45,822 | INFO     | current server update state: UPDATING_FINAL
[2026-02-23 15:49:17] 2026-02-23 20:48:45,822 | INFO     | update_server=False
[2026-02-23 15:49:17] 2026-02-23 20:48:45,822 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-23 15:49:17] 2026-02-23 20:48:45,823 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-23 15:49:17] 2026-02-23 20:48:45,826 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-23 15:49:17] 2026-02-23 20:48:45,826 | INFO     | will abort loop
[2026-02-23 15:49:17] 2026-02-23 20:48:46,012 | INFO     | all payload control threads have been joined
[2026-02-23 15:49:17] 2026-02-23 20:48:46,067 | INFO     | all data control threads have been joined
[2026-02-23 15:49:17] 2026-02-23 20:48:46,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-23 15:49:17] 2026-02-23 20:48:46,748 | INFO     | all job control threads have been joined
[2026-02-23 15:49:17] 2026-02-23 20:48:46,828 | INFO     | [job] retrieve thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:46,832 | INFO     | [job] job monitor thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:47,018 | INFO     | [payload] control thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:47,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-23 15:49:17] 2026-02-23 20:48:47,074 | INFO     | [data] control thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:47,243 | INFO     | [job] create_data_payload thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:47,433 | INFO     | [payload] validate_post thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:47,752 | INFO     | [payload] failed_post thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:47,754 | INFO     | [job] control thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:47,840 | INFO     | [payload] validate_pre thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:47,895 | INFO     | [data] copytool_in thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:48,066 | INFO     | [job] queue monitor thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:48,225 | INFO     | [payload] execute_payloads thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:48,323 | INFO     | [job] validate thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:48,331 | INFO     | [data] copytool_out thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:49,832 | INFO     | [data] queue_monitor thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:48:55,997 | INFO     | job.realtimelogging is not enabled
[2026-02-23 15:49:17] 2026-02-23 20:48:57,014 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-23 15:49:17] 2026-02-23 20:49:10,074 | INFO     | [monitor] cgroup control has ended
[2026-02-23 15:49:17] 2026-02-23 20:49:11,320 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140610632525632)>', '<ExcThread(monitor, started 140609771792128)>']
[2026-02-23 15:49:17] 2026-02-23 20:49:14,770 | INFO     | PID=1326311 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-23 15:49:17] 2026-02-23 20:49:14,770 | INFO     | .. there are 98 such processes running
[2026-02-23 15:49:17] 2026-02-23 20:49:14,770 | INFO     | found 0 job(s) in 20 queues
[2026-02-23 15:49:17] 2026-02-23 20:49:14,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-23 15:49:17] 2026-02-23 20:49:14,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-23 15:49:17] 2026-02-23 20:49:14,770 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-23 15:49:17] 2026-02-23 20:49:14,770 | INFO     | [monitor] control thread has ended
[2026-02-23 15:49:17] 2026-02-23 20:49:16,346 | INFO     | all workflow threads have been joined
[2026-02-23 15:49:17] 2026-02-23 20:49:16,346 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-23 15:49:17] 2026-02-23 20:49:16,346 | INFO     | traces error code: 0
[2026-02-23 15:49:17] 2026-02-23 20:49:16,346 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-23 15:49:17] 2026-02-23 20:49:16,515 [wrapper] ==== pilot stdout END ====
[2026-02-23 15:49:17] 2026-02-23 20:49:16,547 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-23 15:49:17] 2026-02-23 20:49:16,586 [wrapper] pilotpid: 1326311
[2026-02-23 15:49:17] 2026-02-23 20:49:16,608 [wrapper] Pilot exit status: 0
[2026-02-23 15:49:17] 2026-02-23 20:49:16,722 [wrapper] pandaids: 7017658567
[2026-02-23 15:49:17] 2026-02-23 20:49:17,172 [wrapper] cleanup supervisor_pilot 2356407 1326312
[2026-02-23 15:49:17] 2026-02-23 20:49:17,186 [wrapper] Test setup, not cleaning
[2026-02-23 15:49:17] 2026-02-23 20:49:17,211 [wrapper] apfmon messages muted
[2026-02-23 15:49:17] 2026-02-23 20:49:17,231 [wrapper] ==== wrapper stdout END ====
[2026-02-23 15:49:17] 2026-02-23 20:49:17,245 [wrapper] ==== wrapper stderr END ====
[2026-02-23 15:49:17]  *** Error codes and diagnostics ***
[2026-02-23 15:49:17]     "exeErrorCode": 0,
[2026-02-23 15:49:17]     "exeErrorDiag": "",
[2026-02-23 15:49:17]     "pilotErrorCode": 0,
[2026-02-23 15:49:17]     "pilotErrorDiag": "",
[2026-02-23 15:49:17]  *** Listing of results directory ***
[2026-02-23 15:49:17] total 944612
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas    584627 Feb 15 08:09 pilot3.tar.gz
[2026-02-23 15:49:17] -rwx------. 1 boincer umatlas     36322 Feb 15 08:12 runpilot2-wrapper.sh
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas      5111 Feb 15 08:15 queuedata.json
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas       100 Feb 23 13:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-23 15:49:17] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 23 13:45 run_atlas
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas       105 Feb 23 13:45 job.xml
[2026-02-23 15:49:17] -rw-r--r--. 2 boincer umatlas 683277122 Feb 23 13:46 EVNT.48431094._000237.pool.root.1
[2026-02-23 15:49:17] -rw-r--r--. 2 boincer umatlas     15845 Feb 23 13:46 start_atlas.sh
[2026-02-23 15:49:17] drwxrwx--x. 2 boincer umatlas      4096 Feb 23 13:46 shared
[2026-02-23 15:49:17] -rw-r--r--. 2 boincer umatlas    597970 Feb 23 13:46 input.tar.gz
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas         0 Feb 23 13:46 boinc_lockfile
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas      2557 Feb 23 13:46 pandaJob.out
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas        57 Feb 23 13:46 setup.sh.local
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas    997853 Feb 23 13:47 agis_schedconf.cvmfs.json
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas   1513015 Feb 23 13:47 agis_ddmendpoints.agis.ALL.json
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas       430 Feb 23 13:47 workernode_map.json
[2026-02-23 15:49:17] drwx------. 5 boincer umatlas      4096 Feb 23 13:47 pilot3
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas      7170 Feb 23 15:40 init_data.xml
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas 277335484 Feb 23 15:47 HITS.48431096._051444.pool.root.1
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas       530 Feb 23 15:48 boinc_task_state.xml
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas        95 Feb 23 15:48 pilot_heartbeat.json
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas      1036 Feb 23 15:48 memory_monitor_summary.json
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas    414493 Feb 23 15:48 log.48431096._051444.job.log.tgz.1
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas      6333 Feb 23 15:48 heartbeat.json
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas      8192 Feb 23 15:49 boinc_mmap_file
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas        27 Feb 23 15:49 wrapper_checkpoint.txt
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas      5183 Feb 23 15:49 pilotlog.txt
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas    954690 Feb 23 15:49 log.48431096._051444.job.log.1
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas       357 Feb 23 15:49 output.list
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas       620 Feb 23 15:49 runtime_log
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas   1382400 Feb 23 15:49 result.tar.gz
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas      9333 Feb 23 15:49 runtime_log.err
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas       649 Feb 23 15:49 dO8MDmT6qB9n9Rq4apOajLDm4fhM0noT9bVooX4SDmlBpKDm7JIIAo.diag
[2026-02-23 15:49:17] -rw-r--r--. 1 boincer umatlas     21432 Feb 23 15:49 stderr.txt
[2026-02-23 15:49:17] HITS file was successfully produced:
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas 277335484 Feb 23 15:47 shared/HITS.pool.root.1
[2026-02-23 15:49:17]  *** Contents of shared directory: ***
[2026-02-23 15:49:17] total 940060
[2026-02-23 15:49:17] -rw-r--r--. 2 boincer umatlas 683277122 Feb 23 13:46 ATLAS.root_0
[2026-02-23 15:49:17] -rw-r--r--. 2 boincer umatlas     15845 Feb 23 13:46 start_atlas.sh
[2026-02-23 15:49:17] -rw-r--r--. 2 boincer umatlas    597970 Feb 23 13:46 input.tar.gz
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas 277335484 Feb 23 15:47 HITS.pool.root.1
[2026-02-23 15:49:17] -rw-------. 1 boincer umatlas   1382400 Feb 23 15:49 result.tar.gz
15:49:19 (1310741): run_atlas exited; CPU time 35174.444734
15:49:19 (1310741): called boinc_finish(0)

</stderr_txt>
]]>

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