Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:21:33 (2315182): wrapper (7.7.26015): starting
13:21:33 (2315182): wrapper: running run_atlas (--nthreads 8)
[2026-02-23 13:21:33] Arguments: --nthreads 8
[2026-02-23 13:21:33] Threads: 8
[2026-02-23 13:21:33] Checking for CVMFS
[2026-02-23 13:21:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-23 13:21:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-23 13:21:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-23 13:21:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-23 13:21:38] 2.13.3.0 8602 158477 668012 156562 3 685 20187533 21042176 26019 16776704 0 566488673 99.394 855507569 33047 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-23 13:21:38] CVMFS is ok
[2026-02-23 13:21:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-23 13:21:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-23 13:21:38] Further information can be found at the LHC@home message board.
[2026-02-23 13:21:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-23 13:21:38] Checking for apptainer binary...
[2026-02-23 13:21:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-23 13:21:38] Running /usr/bin/apptainer --version
[2026-02-23 13:21:38] apptainer version 1.4.5-2.el9
[2026-02-23 13:21:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-23 13:21:40] c-16-16.aglt2.org
[2026-02-23 13:21:40] apptainer works
[2026-02-23 13:21:40] Set ATHENA_PROC_NUMBER=8
[2026-02-23 13:21:40] Set ATHENA_CORE_NUMBER=8
[2026-02-23 13:21:40] Starting ATLAS job with PandaID=7012833303
[2026-02-23 13:21:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-24 17:43:28]  *** The last 200 lines of the pilot log: ***
[2026-02-24 17:43:29] 2026-02-24 22:42:53,264 | INFO     | preparing for final server update for job 7012833303 in state='finished'
[2026-02-24 17:43:29] 2026-02-24 22:42:53,264 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-7012833303/jobReport.json
[2026-02-24 17:43:29] 2026-02-24 22:42:53,267 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-02-24 17:43:29] 2026-02-24 22:42:53,267 | INFO     | this job has now completed (state=finished)
[2026-02-24 17:43:29] 2026-02-24 22:42:53,268 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-24 17:43:29] 2026-02-24 22:42:53,268 | INFO     | log transfer has been attempted: DONE
[2026-02-24 17:43:29] 2026-02-24 22:42:53,268 | INFO     | job 7012833303 has finished - writing final server update
[2026-02-24 17:43:29] 2026-02-24 22:42:53,268 | INFO     | total number of processed events: 400 (read)
[2026-02-24 17:43:29] 2026-02-24 22:42:53,287 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7012833303/memory_monitor_summary.json (trf name=prmon)
[2026-02-24 17:43:29] 2026-02-24 22:42:53,288 | INFO     | extracted standard info from prmon json
[2026-02-24 17:43:29] 2026-02-24 22:42:53,288 | INFO     | extracted standard memory fields from prmon json
[2026-02-24 17:43:29] 2026-02-24 22:42:53,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-24 17:43:29] 2026-02-24 22:42:53,292 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-24 17:43:29] 2026-02-24 22:42:53,292 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-24 17:43:29] 2026-02-24 22:42:53,360 | INFO     | fitting pss+swap vs Time
[2026-02-24 17:43:29] 2026-02-24 22:42:53,371 | INFO     | sum of square deviations: 1438985049663.8057
[2026-02-24 17:43:29] 2026-02-24 22:42:53,583 | INFO     | sum of deviations: -5544820452499.274
[2026-02-24 17:43:29] 2026-02-24 22:42:53,583 | INFO     | mean x: 1771922084.3770983
[2026-02-24 17:43:29] 2026-02-24 22:42:53,583 | INFO     | mean y: 2778625.1864508395
[2026-02-24 17:43:29] 2026-02-24 22:42:53,583 | INFO     | intersect: 6830500578.2287855
[2026-02-24 17:43:29] 2026-02-24 22:42:53,585 | INFO     | chi2: 10.206842279463986
[2026-02-24 17:43:29] 2026-02-24 22:42:53,595 | INFO     | sum of square deviations: 1426083430709.9485
[2026-02-24 17:43:29] 2026-02-24 22:42:53,702 | INFO     | time since job start (101879s) is within the limit (349056.0s)
[2026-02-24 17:43:29] 2026-02-24 22:42:53,717 | INFO     | sum of deviations: -5393512645336.098
[2026-02-24 17:43:29] 2026-02-24 22:42:53,718 | INFO     | mean x: 1771921931.8797355
[2026-02-24 17:43:29] 2026-02-24 22:42:53,718 | INFO     | mean y: 2780410.5045099217
[2026-02-24 17:43:29] 2026-02-24 22:42:53,718 | INFO     | intersect: 6704270057.140407
[2026-02-24 17:43:29] 2026-02-24 22:42:53,720 | INFO     | chi2: 9.527916731201234
[2026-02-24 17:43:29] 2026-02-24 22:42:53,720 | INFO     | current chi2=9.527916731201234 (change=6.651670807422391 %)
[2026-02-24 17:43:29] 2026-02-24 22:42:53,721 | INFO     | right removable region: 1662
[2026-02-24 17:43:29] 2026-02-24 22:42:53,723 | INFO     | sum of square deviations: 1426082538279.949
[2026-02-24 17:43:29] 2026-02-24 22:42:53,798 | INFO     | monitor loop #4372: job 0:7012833303 is in state 'finished'
[2026-02-24 17:43:29] 2026-02-24 22:42:53,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-24 17:43:29] 2026-02-24 22:42:53,996 | INFO     | sum of deviations: -6111239532970.435
[2026-02-24 17:43:29] 2026-02-24 22:42:53,996 | INFO     | mean x: 1771922236.8797355
[2026-02-24 17:43:29] 2026-02-24 22:42:53,996 | INFO     | mean y: 2785318.3728202046
[2026-02-24 17:43:29] 2026-02-24 22:42:53,996 | INFO     | intersect: 7596063359.929705
[2026-02-24 17:43:29] 2026-02-24 22:42:53,999 | INFO     | chi2: 6.692026447009262
[2026-02-24 17:43:29] 2026-02-24 22:42:53,999 | INFO     | current chi2=6.692026447009262 (change=34.43587875876638 %)
[2026-02-24 17:43:29] 2026-02-24 22:42:54,006 | INFO     | sum of square deviations: 1413257884402.3755
[2026-02-24 17:43:29] 2026-02-24 22:42:54,243 | INFO     | sum of deviations: -6485195556747.226
[2026-02-24 17:43:29] 2026-02-24 22:42:54,243 | INFO     | mean x: 1771922389.3793728
[2026-02-24 17:43:29] 2026-02-24 22:42:54,243 | INFO     | mean y: 2789764.116405308
[2026-02-24 17:43:29] 2026-02-24 22:42:54,243 | INFO     | intersect: 8133834588.510468
[2026-02-24 17:43:29] 2026-02-24 22:42:54,245 | INFO     | chi2: 5.0221735437554775
[2026-02-24 17:43:29] 2026-02-24 22:42:54,246 | INFO     | current chi2=5.0221735437554775 (change=24.95287363964408 %)
[2026-02-24 17:43:29] 2026-02-24 22:42:54,246 | INFO     | left removable region: 20
[2026-02-24 17:43:29] 2026-02-24 22:42:54,256 | INFO     | sum of square deviations: 1372736434309.343
[2026-02-24 17:43:29] 2026-02-24 22:42:54,470 | INFO     | sum of deviations: -6637713025962.14
[2026-02-24 17:43:29] 2026-02-24 22:42:54,470 | INFO     | mean x: 1771922511.3812423
[2026-02-24 17:43:29] 2026-02-24 22:42:54,471 | INFO     | mean y: 2795493.4890377587
[2026-02-24 17:43:29] 2026-02-24 22:42:54,471 | INFO     | intersect: 8570728011.94683
[2026-02-24 17:43:29] 2026-02-24 22:42:54,480 | INFO     | chi2: 3.4687441945633424
[2026-02-24 17:43:29] 2026-02-24 22:42:54,481 | INFO     | current memory leak: -4.84 B/s (using 1642 data points, chi2=3.47)
[2026-02-24 17:43:29] 2026-02-24 22:42:54,482 | INFO     | could have reported an average CPU frequency of 2900 MHz (60 samples)
[2026-02-24 17:43:29] 2026-02-24 22:42:54,482 | INFO     | ..............................
[2026-02-24 17:43:29] 2026-02-24 22:42:54,482 | INFO     | . Timing measurements:
[2026-02-24 17:43:29] 2026-02-24 22:42:54,490 | INFO     | . get job = 1 s
[2026-02-24 17:43:29] 2026-02-24 22:42:54,490 | INFO     | . initial setup = 67 s
[2026-02-24 17:43:29] 2026-02-24 22:42:54,490 | INFO     | . payload setup = 84 s
[2026-02-24 17:43:29] 2026-02-24 22:42:54,490 | INFO     | . stage-in = 1 s
[2026-02-24 17:43:29] 2026-02-24 22:42:54,490 | INFO     | . payload execution = 101776 s
[2026-02-24 17:43:29] 2026-02-24 22:42:54,490 | INFO     | . stage-out = 4 s
[2026-02-24 17:43:29] 2026-02-24 22:42:54,491 | INFO     | . log creation = 0 s
[2026-02-24 17:43:29] 2026-02-24 22:42:54,491 | INFO     | ..............................
[2026-02-24 17:43:29] 2026-02-24 22:42:54,671 | INFO     | 
[2026-02-24 17:43:29] 2026-02-24 22:42:54,671 | INFO     | job summary report
[2026-02-24 17:43:29] 2026-02-24 22:42:54,671 | INFO     | --------------------------------------------------
[2026-02-24 17:43:29] 2026-02-24 22:42:54,671 | INFO     | PanDA job id: 7012833303
[2026-02-24 17:43:29] 2026-02-24 22:42:54,671 | INFO     | task id: 48508763
[2026-02-24 17:43:29] 2026-02-24 22:42:54,672 | INFO     | errors: (none)
[2026-02-24 17:43:29] 2026-02-24 22:42:54,672 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-24 17:43:29] 2026-02-24 22:42:54,672 | INFO     | pilot state: finished 
[2026-02-24 17:43:29] 2026-02-24 22:42:54,672 | INFO     | transexitcode: 0
[2026-02-24 17:43:29] 2026-02-24 22:42:54,672 | INFO     | exeerrorcode: 0
[2026-02-24 17:43:29] 2026-02-24 22:42:54,672 | INFO     | exeerrordiag: 
[2026-02-24 17:43:29] 2026-02-24 22:42:54,673 | INFO     | exitcode: 0
[2026-02-24 17:43:29] 2026-02-24 22:42:54,673 | INFO     | exitmsg: OK
[2026-02-24 17:43:29] 2026-02-24 22:42:54,673 | INFO     | cpuconsumptiontime: 113627 s
[2026-02-24 17:43:29] 2026-02-24 22:42:54,673 | INFO     | nevents: 400
[2026-02-24 17:43:29] 2026-02-24 22:42:54,673 | INFO     | neventsw: 0
[2026-02-24 17:43:29] 2026-02-24 22:42:54,673 | INFO     | pid: 2333851
[2026-02-24 17:43:29] 2026-02-24 22:42:54,673 | INFO     | pgrp: 2333851
[2026-02-24 17:43:29] 2026-02-24 22:42:54,674 | INFO     | corecount: 8
[2026-02-24 17:43:29] 2026-02-24 22:42:54,674 | INFO     | event service: False
[2026-02-24 17:43:29] 2026-02-24 22:42:54,674 | INFO     | sizes: {0: 2281765, 1: 2281821, 2: 2281849, 3: 2281849, 4: 2281849, 5: 2282494, 6: 2282494, 101865: 2350159, 101870: 2359157, 101872: 2359213, 101873: 2359407}
[2026-02-24 17:43:29] 2026-02-24 22:42:54,674 | INFO     | --------------------------------------------------
[2026-02-24 17:43:29] 2026-02-24 22:42:54,674 | INFO     | 
[2026-02-24 17:43:29] 2026-02-24 22:42:54,674 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-24 17:43:29] 2026-02-24 22:42:54,697 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,697 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,697 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,698 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,698 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,698 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,698 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,699 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,699 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,699 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,699 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,700 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,700 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-24 17:43:29] 2026-02-24 22:42:54,700 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,700 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-24 17:43:29] 2026-02-24 22:42:54,705 | INFO     | job 7012833303 has completed (purged errors)
[2026-02-24 17:43:29] 2026-02-24 22:42:54,705 | INFO     | overall cleanup function is called
[2026-02-24 17:43:29] 2026-02-24 22:42:55,714 | INFO     | --- collectZombieJob: --- 10, [2333851]
[2026-02-24 17:43:29] 2026-02-24 22:42:55,715 | INFO     | zombie collector waiting for pid 2333851
[2026-02-24 17:43:29] 2026-02-24 22:42:55,715 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-24 17:43:29] 2026-02-24 22:42:55,715 | INFO     | collected zombie processes
[2026-02-24 17:43:29] 2026-02-24 22:42:55,715 | INFO     | will attempt to kill all subprocesses of pid=2333851
[2026-02-24 17:43:29] 2026-02-24 22:42:56,713 | INFO     | process IDs to be killed: [2333851] (in reverse order)
[2026-02-24 17:43:29] 2026-02-24 22:42:57,181 | WARNING  | found no corresponding commands to process id(s)
[2026-02-24 17:43:29] 2026-02-24 22:42:57,181 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-24 17:43:29] 2026-02-24 22:42:57,261 | INFO     | did not find any defunct processes belonging to 2333851
[2026-02-24 17:43:29] 2026-02-24 22:42:57,310 | INFO     | did not find any defunct processes belonging to 2333851
[2026-02-24 17:43:29] 2026-02-24 22:42:57,310 | INFO     | ready for new job
[2026-02-24 17:43:29] 2026-02-24 22:42:57,311 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-24 17:43:29] 2026-02-24 22:42:57,324 | INFO     | **************************************
[2026-02-24 17:43:29] 2026-02-24 22:42:57,324 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-24 17:43:29] 2026-02-24 22:42:57,324 | INFO     | **************************************
[2026-02-24 17:43:29] 2026-02-24 22:42:57,324 | INFO     | 
[2026-02-24 17:43:29] 2026-02-24 22:42:57,332 | INFO     | architecture information:
[2026-02-24 17:43:29] 2026-02-24 22:42:57,341 | INFO     | executing command: cat /etc/os-release
[2026-02-24 17:43:29] 2026-02-24 22:42:57,367 | INFO     | cat /etc/os-release:
[2026-02-24 17:43:29] NAME="CentOS Linux"
[2026-02-24 17:43:29] VERSION="7 (Core)"
[2026-02-24 17:43:29] ID="centos"
[2026-02-24 17:43:29] ID_LIKE="rhel fedora"
[2026-02-24 17:43:29] VERSION_ID="7"
[2026-02-24 17:43:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-24 17:43:29] ANSI_COLOR="0;31"
[2026-02-24 17:43:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-24 17:43:29] HOME_URL="https://www.centos.org/"
[2026-02-24 17:43:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-24 17:43:29] 
[2026-02-24 17:43:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-24 17:43:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-24 17:43:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-24 17:43:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-24 17:43:29] 
[2026-02-24 17:43:29] 2026-02-24 22:42:57,368 | INFO     | **************************************
[2026-02-24 17:43:29] 2026-02-24 22:42:57,877 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-24 17:43:29] 2026-02-24 22:42:57,970 | INFO     | sufficient remaining disk space (52774830080 B)
[2026-02-24 17:43:29] 2026-02-24 22:42:57,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-24 17:43:29] 2026-02-24 22:42:57,970 | INFO     | current server update state: UPDATING_FINAL
[2026-02-24 17:43:29] 2026-02-24 22:42:57,971 | INFO     | update_server=False
[2026-02-24 17:43:29] 2026-02-24 22:42:57,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-24 17:43:29] 2026-02-24 22:42:57,971 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-24 17:43:29] 2026-02-24 22:42:57,971 | INFO     | aborting loop
[2026-02-24 17:43:29] 2026-02-24 22:42:58,012 | INFO     | all payload control threads have been joined
[2026-02-24 17:43:29] 2026-02-24 22:42:58,313 | INFO     | all data control threads have been joined
[2026-02-24 17:43:29] 2026-02-24 22:42:58,331 | INFO     | all job control threads have been joined
[2026-02-24 17:43:29] 2026-02-24 22:42:58,986 | INFO     | [job] retrieve thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:42:58,986 | INFO     | [job] job monitor thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:42:58,990 | INFO     | [payload] validate_pre thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:42:59,018 | INFO     | [payload] control thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:42:59,054 | INFO     | [job] create_data_payload thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:42:59,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-24 17:43:29] 2026-02-24 22:42:59,297 | INFO     | [payload] execute_payloads thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:42:59,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-24 17:43:29] 2026-02-24 22:42:59,319 | INFO     | [data] control thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:42:59,338 | INFO     | [job] control thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:42:59,416 | INFO     | [job] validate thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:42:59,618 | INFO     | [payload] failed_post thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:42:59,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-24 17:43:29] 2026-02-24 22:42:59,875 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:43:00,045 | INFO     | [data] copytool_in thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:43:00,511 | INFO     | [payload] validate_post thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:43:00,705 | INFO     | [job] queue monitor thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:43:01,317 | INFO     | [data] copytool_out thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:43:03,306 | INFO     | [data] queue_monitor thread has finished
[2026-02-24 17:43:29] 2026-02-24 22:43:20,472 | INFO     | [monitor] cgroup control has ended
[2026-02-24 17:43:29] 2026-02-24 22:43:20,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140371247621952)>', '<ExcThread(monitor, started 140370436404992)>']
[2026-02-24 17:43:29] 2026-02-24 22:43:25,515 | INFO     | all workflow threads have been joined
[2026-02-24 17:43:29] 2026-02-24 22:43:25,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-24 17:43:29] 2026-02-24 22:43:25,517 | INFO     | traces error code: 0
[2026-02-24 17:43:29] 2026-02-24 22:43:25,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-24 17:43:29] 2026-02-24 22:43:27,917 | INFO     | PID=2325053 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-24 17:43:29] 2026-02-24 22:43:27,917 | INFO     | .. there are 41 such processes running
[2026-02-24 17:43:29] 2026-02-24 22:43:27,918 | INFO     | found 0 job(s) in 20 queues
[2026-02-24 17:43:29] 2026-02-24 22:43:27,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-24 17:43:29] 2026-02-24 22:43:27,919 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-24 17:43:29] 2026-02-24 22:43:27,919 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-24 17:43:29] 2026-02-24 22:43:27,919 | INFO     | [monitor] control thread has ended
[2026-02-24 17:43:29] 2026-02-24 22:43:28,161 [wrapper] ==== pilot stdout END ====
[2026-02-24 17:43:29] 2026-02-24 22:43:28,196 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-24 17:43:29] 2026-02-24 22:43:28,235 [wrapper] pilotpid: 2325053
[2026-02-24 17:43:29] 2026-02-24 22:43:28,247 [wrapper] Pilot exit status: 0
[2026-02-24 17:43:29] 2026-02-24 22:43:28,391 [wrapper] pandaids: 7012833303
[2026-02-24 17:43:29] 2026-02-24 22:43:28,558 [wrapper] cleanup supervisor_pilot 3731799 2325054
[2026-02-24 17:43:29] 2026-02-24 22:43:28,562 [wrapper] Test setup, not cleaning
[2026-02-24 17:43:29] 2026-02-24 22:43:28,565 [wrapper] apfmon messages muted
[2026-02-24 17:43:29] 2026-02-24 22:43:28,567 [wrapper] ==== wrapper stdout END ====
[2026-02-24 17:43:29] 2026-02-24 22:43:28,570 [wrapper] ==== wrapper stderr END ====
[2026-02-24 17:43:29]  *** Error codes and diagnostics ***
[2026-02-24 17:43:29]     "exeErrorCode": 0,
[2026-02-24 17:43:29]     "exeErrorDiag": "",
[2026-02-24 17:43:29]     "pilotErrorCode": 0,
[2026-02-24 17:43:29]     "pilotErrorDiag": "",
[2026-02-24 17:43:29]  *** Listing of results directory ***
[2026-02-24 17:43:29] total 963620
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas    584627 Feb 16 00:08 pilot3.tar.gz
[2026-02-24 17:43:29] -rwx------. 1 boincer umatlas     36322 Feb 16 00:12 runpilot2-wrapper.sh
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas      5111 Feb 16 00:14 queuedata.json
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas       100 Feb 23 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-24 17:43:29] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 23 13:21 run_atlas
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas       105 Feb 23 13:21 job.xml
[2026-02-24 17:43:29] -rw-r--r--. 2 boincer umatlas 681282002 Feb 23 13:21 EVNT.48508760._000160.pool.root.1
[2026-02-24 17:43:29] -rw-r--r--. 2 boincer umatlas     15845 Feb 23 13:21 start_atlas.sh
[2026-02-24 17:43:29] drwxrwx--x. 2 boincer umatlas      4096 Feb 23 13:21 shared
[2026-02-24 17:43:29] -rw-r--r--. 2 boincer umatlas    597946 Feb 23 13:21 input.tar.gz
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas         0 Feb 23 13:21 boinc_lockfile
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas      2548 Feb 23 13:21 pandaJob.out
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas        57 Feb 23 13:21 setup.sh.local
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas       441 Feb 23 13:24 workernode_map.json
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas    997853 Feb 23 13:24 agis_schedconf.cvmfs.json
[2026-02-24 17:43:29] drwx------. 5 boincer umatlas      4096 Feb 23 13:24 pilot3
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas      6525 Feb 24 17:39 init_data.xml
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas 278346409 Feb 24 17:41 HITS.48508763._008139.pool.root.1
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas       533 Feb 24 17:41 boinc_task_state.xml
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas      1041 Feb 24 17:42 memory_monitor_summary.json
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas   1513015 Feb 24 17:42 agis_ddmendpoints.agis.ALL.json
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas   1369262 Feb 24 17:42 log.48508763._008139.job.log.tgz.1
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas      6396 Feb 24 17:42 heartbeat.json
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas      8192 Feb 24 17:43 boinc_mmap_file
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas        29 Feb 24 17:43 wrapper_checkpoint.txt
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas        95 Feb 24 17:43 pilot_heartbeat.json
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas       823 Feb 24 17:43 pilotlog.txt
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas  10226657 Feb 24 17:43 log.48508763._008139.job.log.1
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas       357 Feb 24 17:43 output.list
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas       620 Feb 24 17:43 runtime_log
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas  11612160 Feb 24 17:43 result.tar.gz
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas       660 Feb 24 17:43 W8MODmy55B9n9Rq4apOajLDm4fhM0noT9bVooX4SDm5RqKDmnckwkm.diag
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas      9338 Feb 24 17:43 runtime_log.err
[2026-02-24 17:43:29] -rw-r--r--. 1 boincer umatlas     21430 Feb 24 17:43 stderr.txt
[2026-02-24 17:43:29] HITS file was successfully produced:
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas 278346409 Feb 24 17:41 shared/HITS.pool.root.1
[2026-02-24 17:43:29]  *** Contents of shared directory: ***
[2026-02-24 17:43:29] total 949088
[2026-02-24 17:43:29] -rw-r--r--. 2 boincer umatlas 681282002 Feb 23 13:21 ATLAS.root_0
[2026-02-24 17:43:29] -rw-r--r--. 2 boincer umatlas     15845 Feb 23 13:21 start_atlas.sh
[2026-02-24 17:43:29] -rw-r--r--. 2 boincer umatlas    597946 Feb 23 13:21 input.tar.gz
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas 278346409 Feb 24 17:41 HITS.pool.root.1
[2026-02-24 17:43:29] -rw-------. 1 boincer umatlas  11612160 Feb 24 17:43 result.tar.gz
17:43:31 (2315182): run_atlas exited; CPU time 119161.393847
17:43:31 (2315182): called boinc_finish(0)

</stderr_txt>
]]>

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