Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:04:00 (257820): wrapper (7.7.26015): starting
20:04:00 (257820): wrapper: running run_atlas (--nthreads 8)
[2026-02-22 20:04:00] Arguments: --nthreads 8
[2026-02-22 20:04:00] Threads: 8
[2026-02-22 20:04:00] Checking for CVMFS
[2026-02-22 20:04:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-22 20:04:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-22 20:04:00] Running cvmfs_config stat atlas.cern.ch
[2026-02-22 20:04:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-22 20:04:01] 2.13.3.0 10223 157503 316200 156539 2 614 31569067 40960001 60542 16776704 0 1713622278 99.718 1273614192 49075 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-22 20:04:01] CVMFS is ok
[2026-02-22 20:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-22 20:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-22 20:04:01] Further information can be found at the LHC@home message board.
[2026-02-22 20:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-22 20:04:01] Checking for apptainer binary...
[2026-02-22 20:04:01] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-22 20:04:01] Running /usr/bin/apptainer --version
[2026-02-22 20:04:01] apptainer version 1.4.5-2.el9
[2026-02-22 20:04:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-22 20:04:02] c8-7-6.aglt2.org
[2026-02-22 20:04:02] apptainer works
[2026-02-22 20:04:02] Set ATHENA_PROC_NUMBER=8
[2026-02-22 20:04:02] Set ATHENA_CORE_NUMBER=8
[2026-02-22 20:04:02] Starting ATLAS job with PandaID=7011891334
[2026-02-22 20:04:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:28:07 (901085): wrapper (7.7.26015): starting
21:28:07 (901085): wrapper: running run_atlas (--nthreads 8)
[2026-02-22 21:28:07] Arguments: --nthreads 8
[2026-02-22 21:28:07] Threads: 8
[2026-02-22 21:28:07] This job has been restarted, cleaning up previous attempt
[2026-02-22 21:28:07] Checking for CVMFS
[2026-02-22 21:28:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-22 21:28:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-22 21:28:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-22 21:28:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-22 21:28:08] 2.13.3.0 10223 157588 318108 156541 2 612 34150863 40960000 60464 16776704 0 1714382483 99.718 1274246597 49072 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-22 21:28:08] CVMFS is ok
[2026-02-22 21:28:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-22 21:28:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-22 21:28:08] Further information can be found at the LHC@home message board.
[2026-02-22 21:28:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-22 21:28:08] Checking for apptainer binary...
[2026-02-22 21:28:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-22 21:28:08] Running /usr/bin/apptainer --version
[2026-02-22 21:28:08] apptainer version 1.4.5-2.el9
[2026-02-22 21:28:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-22 21:28:09] c8-7-6.aglt2.org
[2026-02-22 21:28:09] apptainer works
[2026-02-22 21:28:09] Set ATHENA_PROC_NUMBER=8
[2026-02-22 21:28:09] Set ATHENA_CORE_NUMBER=8
[2026-02-22 21:28:09] Starting ATLAS job with PandaID=7011891334
[2026-02-22 21:28:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-22 22:49:11]  *** The last 200 lines of the pilot log: ***
[2026-02-22 22:49:11]  guid=9a20f28c-7773-4032-969c-bf037a098fe9
[2026-02-22 22:49:11]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-22 22:49:11]  is_altstaged=None
[2026-02-22 22:49:11]  is_tar=False
[2026-02-22 22:49:11]  lfn=log.48508763._006600.job.log.tgz.1
[2026-02-22 22:49:11]  mtime=0
[2026-02-22 22:49:11]  protocol_id=None
[2026-02-22 22:49:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-22 22:49:11]  replicas=None
[2026-02-22 22:49:11]  scope=mc23_13p6TeV
[2026-02-22 22:49:11]  status=None
[2026-02-22 22:49:11]  status_code=0
[2026-02-22 22:49:11]  storage_token=
[2026-02-22 22:49:11]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-7011891334/log.48508763._006600.job.log.tgz.1
[2026-02-22 22:49:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/e5/log.48508763._006600.job.log.tgz.1
[2026-02-22 22:49:11]  workdir=None
[2026-02-22 22:49:11] ]
[2026-02-22 22:49:11] 2026-02-23 03:48:32,946 | INFO     | transferring file log.48508763._006600.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-7011891334/log.48508763._006600.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-22 22:49:11] 2026-02-23 03:48:32,946 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-7011891334/log.48508763._006600.job.log.tgz.1 /tmp/boinchome/slots/0/log.48508763._006600.job
[2026-02-22 22:49:11] 2026-02-23 03:48:32,962 | INFO     | adding to output.list: log.48508763._006600.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/e5/log.48508763._006600.job.log.tg
[2026-02-22 22:49:11] 2026-02-23 03:48:32,962 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-22 22:49:11] 2026-02-23 03:48:32,962 | INFO     | summary of transferred files:
[2026-02-22 22:49:11] 2026-02-23 03:48:32,962 | INFO     |  -- lfn=log.48508763._006600.job.log.tgz.1, status_code=0, status=transferred
[2026-02-22 22:49:11] 2026-02-23 03:48:32,962 | INFO     | stage-out finished correctly
[2026-02-22 22:49:11] 2026-02-23 03:48:33,094 | INFO     | time since job start (4783s) is within the limit (349056.0s)
[2026-02-22 22:49:11] 2026-02-23 03:48:35,100 | INFO     | time since job start (4785s) is within the limit (349056.0s)
[2026-02-22 22:49:11] 2026-02-23 03:48:35,309 | INFO     | monitor loop #329: job 0:7011891334 is in state 'finished'
[2026-02-22 22:49:11] 2026-02-23 03:48:35,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-22 22:49:11] 2026-02-23 03:48:36,257 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-22 22:49:11] 2026-02-23 03:48:37,022 | INFO     | job 7011891334 has state=finished
[2026-02-22 22:49:11] 2026-02-23 03:48:37,022 | INFO     | preparing for final server update for job 7011891334 in state='finished'
[2026-02-22 22:49:11] 2026-02-23 03:48:37,022 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-7011891334/jobReport.json
[2026-02-22 22:49:11] 2026-02-23 03:48:37,024 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-22 22:49:11] 2026-02-23 03:48:37,024 | INFO     | this job has now completed (state=finished)
[2026-02-22 22:49:11] 2026-02-23 03:48:37,024 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-22 22:49:11] 2026-02-23 03:48:37,024 | INFO     | log transfer has been attempted: DONE
[2026-02-22 22:49:11] 2026-02-23 03:48:37,024 | INFO     | job 7011891334 has finished - writing final server update
[2026-02-22 22:49:11] 2026-02-23 03:48:37,024 | INFO     | total number of processed events: 400 (read)
[2026-02-22 22:49:11] 2026-02-23 03:48:37,041 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7011891334/memory_monitor_summary.json (trf name=prmon)
[2026-02-22 22:49:11] 2026-02-23 03:48:37,042 | INFO     | extracted standard info from prmon json
[2026-02-22 22:49:11] 2026-02-23 03:48:37,042 | INFO     | extracted standard memory fields from prmon json
[2026-02-22 22:49:11] 2026-02-23 03:48:37,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-22 22:49:11] 2026-02-23 03:48:37,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-22 22:49:11] 2026-02-23 03:48:37,042 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-22 22:49:11] 2026-02-23 03:48:37,043 | INFO     | fitting pss+swap vs Time
[2026-02-22 22:49:11] 2026-02-23 03:48:37,043 | INFO     | sum of square deviations: 110960220.0
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | sum of deviations: -14984844834.000004
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | mean x: 1771816211.0
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | mean y: 2795599.1830985914
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | intersect: 239281259504.54318
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | chi2: 0.1091730755895037
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | current memory leak: -135.05 B/s (using 71 data points, chi2=0.11)
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | ..............................
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | . Timing measurements:
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | . get job = 0 s
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | . initial setup = 2 s
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | . payload setup = 19 s
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | . stage-in = 0 s
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | . payload execution = 4747 s
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | . stage-out = 0 s
[2026-02-22 22:49:11] 2026-02-23 03:48:37,044 | INFO     | . log creation = 0 s
[2026-02-22 22:49:11] 2026-02-23 03:48:37,045 | INFO     | ..............................
[2026-02-22 22:49:11] 2026-02-23 03:48:37,092 | INFO     | 
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | job summary report
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | --------------------------------------------------
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | PanDA job id: 7011891334
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | task id: 48508763
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | errors: (none)
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | pilot state: finished 
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | transexitcode: 0
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | exeerrorcode: 0
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | exeerrordiag: 
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | exitcode: 0
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | exitmsg: OK
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | cpuconsumptiontime: 32659 s
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | nevents: 400
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | neventsw: 0
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | pid: 922835
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | pgrp: 922835
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | corecount: 8
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | event service: False
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | sizes: {0: 2281166, 1: 2282284, 12: 2282284, 4770: 2308723, 4771: 2317721, 4774: 2317777, 4775: 2318099}
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | --------------------------------------------------
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | 
[2026-02-22 22:49:11] 2026-02-23 03:48:37,093 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-22 22:49:11] 2026-02-23 03:48:37,106 | INFO     | time since job start (4787s) is within the limit (349056.0s)
[2026-02-22 22:49:11] 2026-02-23 03:48:37,112 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,112 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | job 7011891334 has completed (purged errors)
[2026-02-22 22:49:11] 2026-02-23 03:48:37,113 | INFO     | overall cleanup function is called
[2026-02-22 22:49:11] 2026-02-23 03:48:38,122 | INFO     | --- collectZombieJob: --- 10, [922835]
[2026-02-22 22:49:11] 2026-02-23 03:48:38,124 | INFO     | zombie collector waiting for pid 922835
[2026-02-22 22:49:11] 2026-02-23 03:48:38,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-22 22:49:11] 2026-02-23 03:48:38,124 | INFO     | collected zombie processes
[2026-02-22 22:49:11] 2026-02-23 03:48:38,124 | INFO     | will attempt to kill all subprocesses of pid=922835
[2026-02-22 22:49:11] 2026-02-23 03:48:38,649 | INFO     | process IDs to be killed: [922835] (in reverse order)
[2026-02-22 22:49:11] 2026-02-23 03:48:38,849 | WARNING  | found no corresponding commands to process id(s)
[2026-02-22 22:49:11] 2026-02-23 03:48:38,849 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-22 22:49:11] 2026-02-23 03:48:38,876 | INFO     | did not find any defunct processes belonging to 922835
[2026-02-22 22:49:11] 2026-02-23 03:48:38,902 | INFO     | did not find any defunct processes belonging to 922835
[2026-02-22 22:49:11] 2026-02-23 03:48:38,902 | INFO     | ready for new job
[2026-02-22 22:49:11] 2026-02-23 03:48:38,902 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-22 22:49:11] 2026-02-23 03:48:38,903 | INFO     | **************************************
[2026-02-22 22:49:11] 2026-02-23 03:48:38,903 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-22 22:49:11] 2026-02-23 03:48:38,903 | INFO     | **************************************
[2026-02-22 22:49:11] 2026-02-23 03:48:38,903 | INFO     | 
[2026-02-22 22:49:11] 2026-02-23 03:48:38,906 | INFO     | architecture information:
[2026-02-22 22:49:11] 2026-02-23 03:48:38,906 | INFO     | executing command: cat /etc/os-release
[2026-02-22 22:49:11] 2026-02-23 03:48:38,915 | INFO     | cat /etc/os-release:
[2026-02-22 22:49:11] NAME="CentOS Linux"
[2026-02-22 22:49:11] VERSION="7 (Core)"
[2026-02-22 22:49:11] ID="centos"
[2026-02-22 22:49:11] ID_LIKE="rhel fedora"
[2026-02-22 22:49:11] VERSION_ID="7"
[2026-02-22 22:49:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-22 22:49:11] ANSI_COLOR="0;31"
[2026-02-22 22:49:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-22 22:49:11] HOME_URL="https://www.centos.org/"
[2026-02-22 22:49:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-22 22:49:11] 
[2026-02-22 22:49:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-22 22:49:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-22 22:49:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-22 22:49:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-22 22:49:11] 
[2026-02-22 22:49:11] 2026-02-23 03:48:38,915 | INFO     | **************************************
[2026-02-22 22:49:11] 2026-02-23 03:48:39,418 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-22 22:49:11] 2026-02-23 03:48:39,434 | INFO     | sufficient remaining disk space (172683689984 B)
[2026-02-22 22:49:11] 2026-02-23 03:48:39,435 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-22 22:49:11] 2026-02-23 03:48:39,435 | INFO     | current server update state: UPDATING_FINAL
[2026-02-22 22:49:11] 2026-02-23 03:48:39,435 | INFO     | update_server=False
[2026-02-22 22:49:11] 2026-02-23 03:48:39,435 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-22 22:49:11] 2026-02-23 03:48:39,435 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-22 22:49:11] 2026-02-23 03:48:39,435 | INFO     | aborting loop
[2026-02-22 22:49:11] 2026-02-23 03:48:39,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-22 22:49:11] 2026-02-23 03:48:40,076 | INFO     | all payload control threads have been joined
[2026-02-22 22:49:11] 2026-02-23 03:48:40,440 | INFO     | [job] job monitor thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:40,441 | INFO     | [job] retrieve thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:40,472 | INFO     | [job] create_data_payload thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:40,499 | INFO     | all data control threads have been joined
[2026-02-22 22:49:11] 2026-02-23 03:48:40,503 | INFO     | all job control threads have been joined
[2026-02-22 22:49:11] 2026-02-23 03:48:40,552 | INFO     | [payload] validate_post thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:40,894 | INFO     | [payload] validate_pre thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:41,081 | INFO     | [payload] control thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:41,290 | INFO     | [payload] failed_post thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:41,441 | INFO     | [data] copytool_out thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:41,501 | INFO     | [job] validate thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:41,504 | INFO     | [data] control thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:41,509 | INFO     | [job] control thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:41,521 | INFO     | [payload] execute_payloads thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:41,654 | INFO     | [data] copytool_in thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:42,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-22 22:49:11] 2026-02-23 03:48:42,313 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-22 22:49:11] 2026-02-23 03:48:43,106 | INFO     | [job] queue monitor thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:46,320 | INFO     | [data] queue_monitor thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:49,605 | INFO     | job.realtimelogging is not enabled
[2026-02-22 22:49:11] 2026-02-23 03:48:50,610 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-22 22:49:11] 2026-02-23 03:48:57,732 | INFO     | [monitor] cgroup control has ended
[2026-02-22 22:49:11] 2026-02-23 03:48:58,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549148432192)>', '<ExcThread(monitor, started 140548576900864)>']
[2026-02-22 22:49:11] 2026-02-23 03:49:03,151 | INFO     | all workflow threads have been joined
[2026-02-22 22:49:11] 2026-02-23 03:49:03,152 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-22 22:49:11] 2026-02-23 03:49:03,152 | INFO     | traces error code: 0
[2026-02-22 22:49:11] 2026-02-23 03:49:03,152 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-22 22:49:11] 2026-02-23 03:49:10,863 | INFO     | PID=911912 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-22 22:49:11] 2026-02-23 03:49:10,864 | INFO     | .. there are 81 such processes running
[2026-02-22 22:49:11] 2026-02-23 03:49:10,864 | INFO     | found 0 job(s) in 20 queues
[2026-02-22 22:49:11] 2026-02-23 03:49:10,864 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-22 22:49:11] 2026-02-23 03:49:10,864 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-22 22:49:11] 2026-02-23 03:49:10,864 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-22 22:49:11] 2026-02-23 03:49:10,864 | INFO     | [monitor] control thread has ended
[2026-02-22 22:49:11] 2026-02-23 03:49:10,978 [wrapper] ==== pilot stdout END ====
[2026-02-22 22:49:11] 2026-02-23 03:49:10,980 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-22 22:49:11] 2026-02-23 03:49:10,987 [wrapper] pilotpid: 911912
[2026-02-22 22:49:11] 2026-02-23 03:49:10,989 [wrapper] Pilot exit status: 0
[2026-02-22 22:49:11] 2026-02-23 03:49:10,997 [wrapper] pandaids: 7011891334 7011891334
[2026-02-22 22:49:11] 2026-02-23 03:49:11,134 [wrapper] cleanup supervisor_pilot 1818786 911913
[2026-02-22 22:49:11] 2026-02-23 03:49:11,137 [wrapper] Test setup, not cleaning
[2026-02-22 22:49:11] 2026-02-23 03:49:11,140 [wrapper] apfmon messages muted
[2026-02-22 22:49:11] 2026-02-23 03:49:11,143 [wrapper] ==== wrapper stdout END ====
[2026-02-22 22:49:11] 2026-02-23 03:49:11,145 [wrapper] ==== wrapper stderr END ====
[2026-02-22 22:49:11]  *** Error codes and diagnostics ***
[2026-02-22 22:49:11]     "exeErrorCode": 0,
[2026-02-22 22:49:11]     "exeErrorDiag": "",
[2026-02-22 22:49:11]     "pilotErrorCode": 0,
[2026-02-22 22:49:11]     "pilotErrorDiag": "",
[2026-02-22 22:49:11]  *** Listing of results directory ***
[2026-02-22 22:49:11] total 1601864
[2026-02-22 22:49:11] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas    584627 Feb 15 03:47 pilot3.tar.gz
[2026-02-22 22:49:11] -rwx------. 1 boincer umatlas     36322 Feb 15 03:49 runpilot2-wrapper.sh
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas      5111 Feb 15 03:52 queuedata.json
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas       100 Feb 22 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-22 22:49:11] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 22 20:03 run_atlas
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas       105 Feb 22 20:03 job.xml
[2026-02-22 22:49:11] -rw-r--r--. 3 boincer umatlas 678387154 Feb 22 20:03 EVNT.48508760._000129.pool.root.1
[2026-02-22 22:49:11] -rw-r--r--. 3 boincer umatlas 678387154 Feb 22 20:03 ATLAS.root_0
[2026-02-22 22:49:11] -rw-r--r--. 2 boincer umatlas     15845 Feb 22 20:03 start_atlas.sh
[2026-02-22 22:49:11] drwxrwx--x. 2 boincer umatlas      4096 Feb 22 20:03 shared
[2026-02-22 22:49:11] -rw-r--r--. 2 boincer umatlas    597957 Feb 22 20:03 input.tar.gz
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas         0 Feb 22 20:04 boinc_lockfile
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas   1513015 Feb 22 20:04 agis_ddmendpoints.agis.ALL.json
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas      2549 Feb 22 21:28 pandaJob.out
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas        57 Feb 22 21:28 setup.sh.local
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas    998264 Feb 22 21:28 agis_schedconf.cvmfs.json
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas       430 Feb 22 21:28 workernode_map.json
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas 277547351 Feb 22 22:48 HITS.48508763._006600.pool.root.1
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas       530 Feb 22 22:48 boinc_task_state.xml
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas        96 Feb 22 22:48 pilot_heartbeat.json
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas      7171 Feb 22 22:48 init_data.xml
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas      1032 Feb 22 22:48 memory_monitor_summary.json
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas    350988 Feb 22 22:48 log.48508763._006600.job.log.tgz.1
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas      6333 Feb 22 22:48 heartbeat.json
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas      8192 Feb 22 22:49 boinc_mmap_file
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas        27 Feb 22 22:49 wrapper_checkpoint.txt
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas       822 Feb 22 22:49 pilotlog.txt
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas    679135 Feb 22 22:49 log.48508763._006600.job.log.1
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas       357 Feb 22 22:49 output.list
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas       620 Feb 22 22:49 runtime_log
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas   1044480 Feb 22 22:49 result.tar.gz
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas      9416 Feb 22 22:49 runtime_log.err
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas       776 Feb 22 22:49 gNVLDmH0mB9nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmIdpKDmrlBQEn.diag
[2026-02-22 22:49:11] -rw-r--r--. 1 boincer umatlas     23530 Feb 22 22:49 stderr.txt
[2026-02-22 22:49:11] HITS file was successfully produced:
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas 277547351 Feb 22 22:48 shared/HITS.pool.root.1
[2026-02-22 22:49:11]  *** Contents of shared directory: ***
[2026-02-22 22:49:11] total 935160
[2026-02-22 22:49:11] -rw-r--r--. 3 boincer umatlas 678387154 Feb 22 20:03 ATLAS.root_0
[2026-02-22 22:49:11] -rw-r--r--. 2 boincer umatlas     15845 Feb 22 20:03 start_atlas.sh
[2026-02-22 22:49:11] -rw-r--r--. 2 boincer umatlas    597957 Feb 22 20:03 input.tar.gz
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas 277547351 Feb 22 22:48 HITS.pool.root.1
[2026-02-22 22:49:11] -rw-------. 1 boincer umatlas   1044480 Feb 22 22:49 result.tar.gz
22:49:12 (901085): run_atlas exited; CPU time 32851.285801
22:49:12 (901085): called boinc_finish(0)

</stderr_txt>
]]>

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