Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:09:50 (2391716): wrapper (7.7.26015): starting
22:09:50 (2391716): wrapper: running run_atlas (--nthreads 12)
[2026-02-22 22:09:50] Arguments: --nthreads 12
[2026-02-22 22:09:50] Threads: 12
[2026-02-22 22:09:50] Checking for CVMFS
[2026-02-22 22:09:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-22 22:09:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-22 22:09:50] Running cvmfs_config stat atlas.cern.ch
[2026-02-22 22:09:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-22 22:09:50] 2.13.3.0 6428 85755 211308 156542 1 286 25409328 39288833 4842 16776704 0 47332933 99.700 56015669 39210 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-22 22:09:50] CVMFS is ok
[2026-02-22 22:09:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-22 22:09:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-22 22:09:50] Further information can be found at the LHC@home message board.
[2026-02-22 22:09:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-22 22:09:50] Checking for apptainer binary...
[2026-02-22 22:09:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-22 22:09:50] Running /usr/bin/apptainer --version
[2026-02-22 22:09:50] apptainer version 1.4.5-2.el9
[2026-02-22 22:09:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-22 22:09:50] c-211-3.aglt2.org
[2026-02-22 22:09:50] apptainer works
[2026-02-22 22:09:50] Set ATHENA_PROC_NUMBER=12
[2026-02-22 22:09:50] Set ATHENA_CORE_NUMBER=12
[2026-02-22 22:09:50] Starting ATLAS job with PandaID=7018913655
[2026-02-22 22:09:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:30:39 (2684615): wrapper (7.7.26015): starting
01:30:39 (2684615): wrapper: running run_atlas (--nthreads 12)
[2026-02-23 01:30:39] Arguments: --nthreads 12
[2026-02-23 01:30:39] Threads: 12
[2026-02-23 01:30:39] This job has been restarted, cleaning up previous attempt
[2026-02-23 01:30:39] Checking for CVMFS
[2026-02-23 01:30:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-23 01:30:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-23 01:30:39] Running cvmfs_config stat atlas.cern.ch
[2026-02-23 01:30:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-23 01:30:40] 2.13.3.0 6428 85956 205712 156548 0 19 25762804 39288833 4520 16776704 0 47429949 99.701 56023859 39209 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-23 01:30:40] CVMFS is ok
[2026-02-23 01:30:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-23 01:30:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-23 01:30:40] Further information can be found at the LHC@home message board.
[2026-02-23 01:30:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-23 01:30:40] Checking for apptainer binary...
[2026-02-23 01:30:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-23 01:30:40] Running /usr/bin/apptainer --version
[2026-02-23 01:30:40] apptainer version 1.4.5-2.el9
[2026-02-23 01:30:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-23 01:30:40] c-211-3.aglt2.org
[2026-02-23 01:30:40] apptainer works
[2026-02-23 01:30:40] Set ATHENA_PROC_NUMBER=12
[2026-02-23 01:30:40] Set ATHENA_CORE_NUMBER=12
[2026-02-23 01:30:40] Starting ATLAS job with PandaID=7018913655
[2026-02-23 01:30:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-23 09:55:47]  *** The last 200 lines of the pilot log: ***
[2026-02-23 09:55:47] 2026-02-23 13:46:32,539 | INFO     | job 7018913655 has finished - writing final server update
[2026-02-23 09:55:47] 2026-02-23 13:46:32,539 | INFO     | total number of processed events: 400 (read)
[2026-02-23 09:55:47] 2026-02-23 13:46:32,547 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-7018913655/memory_monitor_summary.json (trf name=prmon)
[2026-02-23 09:55:47] 2026-02-23 13:46:32,548 | INFO     | extracted standard info from prmon json
[2026-02-23 09:55:47] 2026-02-23 13:46:32,574 | INFO     | extracted standard memory fields from prmon json
[2026-02-23 09:55:47] 2026-02-23 13:46:32,577 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-23 09:55:47] 2026-02-23 13:46:32,581 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-23 09:55:47] 2026-02-23 13:46:32,581 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-23 09:55:47] 2026-02-23 13:46:32,627 | INFO     | monitor loop #1535: job 0:7018913655 is in state 'finished'
[2026-02-23 09:55:47] 2026-02-23 13:46:32,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-23 09:55:47] 2026-02-23 13:46:32,633 | INFO     | fitting pss+swap vs Time
[2026-02-23 09:55:47] 2026-02-23 13:46:32,646 | INFO     | sum of square deviations: 24140549321.798733
[2026-02-23 09:55:47] 2026-02-23 13:46:32,701 | INFO     | sum of deviations: -67565805216.54561
[2026-02-23 09:55:47] 2026-02-23 13:46:32,701 | INFO     | mean x: 1771841333.8454332
[2026-02-23 09:55:47] 2026-02-23 13:46:32,701 | INFO     | mean y: 2778073.9765807963
[2026-02-23 09:55:47] 2026-02-23 13:46:32,701 | INFO     | intersect: 4961898301.167201
[2026-02-23 09:55:47] 2026-02-23 13:46:32,702 | INFO     | chi2: 5.0322556626855794
[2026-02-23 09:55:47] 2026-02-23 13:46:32,703 | INFO     | sum of square deviations: 23302469068.391045
[2026-02-23 09:55:47] 2026-02-23 13:46:32,752 | INFO     | sum of deviations: 56791408272.4218
[2026-02-23 09:55:47] 2026-02-23 13:46:32,753 | INFO     | mean x: 1771841181.3530805
[2026-02-23 09:55:47] 2026-02-23 13:46:32,802 | INFO     | mean y: 2800652.8293838864
[2026-02-23 09:55:47] 2026-02-23 13:46:32,802 | INFO     | intersect: -4315426554.286946
[2026-02-23 09:55:47] 2026-02-23 13:46:32,803 | INFO     | chi2: 2.0400468108309084
[2026-02-23 09:55:47] 2026-02-23 13:46:32,803 | INFO     | current chi2=2.0400468108309084 (change=59.46058889738145 %)
[2026-02-23 09:55:47] 2026-02-23 13:46:32,804 | INFO     | sum of square deviations: 22483939500.07677
[2026-02-23 09:55:47] 2026-02-23 13:46:32,858 | INFO     | sum of deviations: 56997345671.14156
[2026-02-23 09:55:47] 2026-02-23 13:46:32,858 | INFO     | mean x: 1771841028.853717
[2026-02-23 09:55:47] 2026-02-23 13:46:32,858 | INFO     | mean y: 2800691.1990407673
[2026-02-23 09:55:47] 2026-02-23 13:46:32,858 | INFO     | intersect: -4488860371.8251505
[2026-02-23 09:55:47] 2026-02-23 13:46:32,907 | INFO     | chi2: 2.0404245078596936
[2026-02-23 09:55:47] 2026-02-23 13:46:32,908 | INFO     | current chi2=2.0404245078596936 (change=-0.01851413540022501 %)
[2026-02-23 09:55:47] 2026-02-23 13:46:32,908 | INFO     | right removable region: 416
[2026-02-23 09:55:47] 2026-02-23 13:46:32,908 | INFO     | sum of square deviations: 23302274660.68257
[2026-02-23 09:55:47] 2026-02-23 13:46:32,960 | INFO     | sum of deviations: -158000444572.09958
[2026-02-23 09:55:47] 2026-02-23 13:46:32,960 | INFO     | mean x: 1771841486.3554502
[2026-02-23 09:55:47] 2026-02-23 13:46:32,961 | INFO     | mean y: 2794462.260663507
[2026-02-23 09:55:47] 2026-02-23 13:46:32,961 | INFO     | intersect: 12016717850.942001
[2026-02-23 09:55:47] 2026-02-23 13:46:32,961 | INFO     | chi2: 3.297047289186395
[2026-02-23 09:55:47] 2026-02-23 13:46:32,962 | INFO     | current chi2=3.297047289186395 (change=34.481721315668416 %)
[2026-02-23 09:55:47] 2026-02-23 13:46:33,005 | INFO     | sum of square deviations: 22483628274.479534
[2026-02-23 09:55:47] 2026-02-23 13:46:33,036 | INFO     | sum of deviations: -170806658345.15826
[2026-02-23 09:55:47] 2026-02-23 13:46:33,037 | INFO     | mean x: 1771841638.8657074
[2026-02-23 09:55:47] 2026-02-23 13:46:33,037 | INFO     | mean y: 2796845.6043165466
[2026-02-23 09:55:47] 2026-02-23 13:46:33,037 | INFO     | intersect: 13463362273.78212
[2026-02-23 09:55:47] 2026-02-23 13:46:33,038 | INFO     | chi2: 3.257010949326074
[2026-02-23 09:55:47] 2026-02-23 13:46:33,038 | INFO     | current chi2=3.257010949326074 (change=1.2143089361087278 %)
[2026-02-23 09:55:47] 2026-02-23 13:46:33,038 | INFO     | left removable region: 20
[2026-02-23 09:55:47] 2026-02-23 13:46:33,038 | INFO     | sum of square deviations: 19255063509.636406
[2026-02-23 09:55:47] 2026-02-23 13:46:33,068 | INFO     | sum of deviations: -21262900540.090878
[2026-02-23 09:55:47] 2026-02-23 13:46:33,100 | INFO     | mean x: 1771841608.3636363
[2026-02-23 09:55:47] 2026-02-23 13:46:33,100 | INFO     | mean y: 2815369.5631313133
[2026-02-23 09:55:47] 2026-02-23 13:46:33,100 | INFO     | intersect: 1959417167.9719522
[2026-02-23 09:55:47] 2026-02-23 13:46:33,101 | INFO     | chi2: 0.15599694041939108
[2026-02-23 09:55:47] 2026-02-23 13:46:33,101 | INFO     | current memory leak: -1.10 B/s (using 396 data points, chi2=0.16)
[2026-02-23 09:55:47] 2026-02-23 13:46:33,102 | INFO     | could have reported an average CPU frequency of 2600 MHz (18 samples)
[2026-02-23 09:55:47] 2026-02-23 13:46:33,102 | INFO     | ..............................
[2026-02-23 09:55:47] 2026-02-23 13:46:33,102 | INFO     | . Timing measurements:
[2026-02-23 09:55:47] 2026-02-23 13:46:33,102 | INFO     | . get job = 0 s
[2026-02-23 09:55:47] 2026-02-23 13:46:33,103 | INFO     | . initial setup = 3 s
[2026-02-23 09:55:47] 2026-02-23 13:46:33,103 | INFO     | . payload setup = 43 s
[2026-02-23 09:55:47] 2026-02-23 13:46:33,103 | INFO     | . stage-in = 0 s
[2026-02-23 09:55:47] 2026-02-23 13:46:33,103 | INFO     | . payload execution = 26041 s
[2026-02-23 09:55:47] 2026-02-23 13:46:33,103 | INFO     | . stage-out = 13 s
[2026-02-23 09:55:47] 2026-02-23 13:46:33,103 | INFO     | . log creation = 0 s
[2026-02-23 09:55:47] 2026-02-23 13:46:33,103 | INFO     | ..............................
[2026-02-23 09:55:47] 2026-02-23 13:46:33,725 | INFO     | 
[2026-02-23 09:55:47] 2026-02-23 13:46:33,729 | INFO     | job summary report
[2026-02-23 09:55:47] 2026-02-23 13:46:33,730 | INFO     | --------------------------------------------------
[2026-02-23 09:55:47] 2026-02-23 13:46:33,730 | INFO     | PanDA job id: 7018913655
[2026-02-23 09:55:47] 2026-02-23 13:46:33,730 | INFO     | task id: 48508763
[2026-02-23 09:55:47] 2026-02-23 13:46:33,730 | INFO     | errors: (none)
[2026-02-23 09:55:47] 2026-02-23 13:46:33,730 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-23 09:55:47] 2026-02-23 13:46:33,730 | INFO     | pilot state: finished 
[2026-02-23 09:55:47] 2026-02-23 13:46:33,730 | INFO     | transexitcode: 0
[2026-02-23 09:55:47] 2026-02-23 13:46:33,730 | INFO     | exeerrorcode: 0
[2026-02-23 09:55:47] 2026-02-23 13:46:33,730 | INFO     | exeerrordiag: 
[2026-02-23 09:55:47] 2026-02-23 13:46:33,731 | INFO     | exitcode: 0
[2026-02-23 09:55:47] 2026-02-23 13:46:33,731 | INFO     | exitmsg: OK
[2026-02-23 09:55:47] 2026-02-23 13:46:33,731 | INFO     | cpuconsumptiontime: 70767 s
[2026-02-23 09:55:47] 2026-02-23 13:46:33,731 | INFO     | nevents: 400
[2026-02-23 09:55:47] 2026-02-23 13:46:33,731 | INFO     | neventsw: 0
[2026-02-23 09:55:47] 2026-02-23 13:46:33,731 | INFO     | pid: 2691371
[2026-02-23 09:55:47] 2026-02-23 13:46:33,731 | INFO     | pgrp: 2691371
[2026-02-23 09:55:47] 2026-02-23 13:46:33,731 | INFO     | corecount: 12
[2026-02-23 09:55:47] 2026-02-23 13:46:33,731 | INFO     | event service: False
[2026-02-23 09:55:47] 2026-02-23 13:46:33,731 | INFO     | sizes: {0: 2281172, 1: 2281857, 2: 2282318, 3: 2282318, 14: 2282346, 26091: 2318314, 26092: 2318441, 26106: 2327523, 26109: 2327579, 26111: 2327773}
[2026-02-23 09:55:47] 2026-02-23 13:46:33,732 | INFO     | --------------------------------------------------
[2026-02-23 09:55:47] 2026-02-23 13:46:33,732 | INFO     | 
[2026-02-23 09:55:47] 2026-02-23 13:46:33,732 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-23 09:55:47] 2026-02-23 13:46:33,965 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,965 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,966 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,966 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,966 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,966 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,966 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,966 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,966 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,966 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,967 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,967 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,967 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,967 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,967 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,967 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,967 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-23 09:55:47] 2026-02-23 13:46:33,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,968 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-23 09:55:47] 2026-02-23 13:46:33,968 | INFO     | job 7018913655 has completed (purged errors)
[2026-02-23 09:55:47] 2026-02-23 13:46:33,968 | INFO     | overall cleanup function is called
[2026-02-23 09:55:47] 2026-02-23 13:46:35,026 | INFO     | --- collectZombieJob: --- 10, [2691371]
[2026-02-23 09:55:47] 2026-02-23 13:46:35,026 | INFO     | zombie collector waiting for pid 2691371
[2026-02-23 09:55:47] 2026-02-23 13:46:35,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-23 09:55:47] 2026-02-23 13:46:35,026 | INFO     | collected zombie processes
[2026-02-23 09:55:47] 2026-02-23 13:46:35,026 | INFO     | will attempt to kill all subprocesses of pid=2691371
[2026-02-23 09:55:47] 2026-02-23 13:46:37,170 | INFO     | process IDs to be killed: [2691371] (in reverse order)
[2026-02-23 09:55:47] 2026-02-23 13:46:38,017 | WARNING  | found no corresponding commands to process id(s)
[2026-02-23 09:55:47] 2026-02-23 13:46:38,017 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-23 09:55:47] 2026-02-23 13:46:38,102 | INFO     | did not find any defunct processes belonging to 2691371
[2026-02-23 09:55:47] 2026-02-23 13:46:38,207 | INFO     | did not find any defunct processes belonging to 2691371
[2026-02-23 09:55:47] 2026-02-23 13:46:38,208 | INFO     | ready for new job
[2026-02-23 09:55:47] 2026-02-23 13:46:38,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-23 09:55:47] 2026-02-23 13:46:38,259 | INFO     | **************************************
[2026-02-23 09:55:47] 2026-02-23 13:46:38,259 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-23 09:55:47] 2026-02-23 13:46:38,260 | INFO     | **************************************
[2026-02-23 09:55:47] 2026-02-23 13:46:38,260 | INFO     | 
[2026-02-23 09:55:47] 2026-02-23 13:46:38,262 | INFO     | architecture information:
[2026-02-23 09:55:47] 2026-02-23 13:46:38,288 | INFO     | executing command: cat /etc/os-release
[2026-02-23 09:55:47] 2026-02-23 13:46:38,523 | INFO     | cat /etc/os-release:
[2026-02-23 09:55:47] NAME="CentOS Linux"
[2026-02-23 09:55:47] VERSION="7 (Core)"
[2026-02-23 09:55:47] ID="centos"
[2026-02-23 09:55:47] ID_LIKE="rhel fedora"
[2026-02-23 09:55:47] VERSION_ID="7"
[2026-02-23 09:55:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-23 09:55:47] ANSI_COLOR="0;31"
[2026-02-23 09:55:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-23 09:55:47] HOME_URL="https://www.centos.org/"
[2026-02-23 09:55:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-23 09:55:47] 
[2026-02-23 09:55:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-23 09:55:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-23 09:55:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-23 09:55:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-23 09:55:47] 
[2026-02-23 09:55:47] 2026-02-23 13:46:38,524 | INFO     | **************************************
[2026-02-23 09:55:47] 2026-02-23 13:46:39,027 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-23 09:55:47] 2026-02-23 13:46:39,208 | INFO     | sufficient remaining disk space (51419021312 B)
[2026-02-23 09:55:47] 2026-02-23 13:46:39,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-23 09:55:47] 2026-02-23 13:46:39,209 | INFO     | current server update state: UPDATING_FINAL
[2026-02-23 09:55:47] 2026-02-23 13:46:39,209 | INFO     | update_server=False
[2026-02-23 09:55:47] 2026-02-23 13:46:39,209 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-23 09:55:47] 2026-02-23 13:46:39,225 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-23 09:55:47] 2026-02-23 13:46:39,225 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-23 09:55:47] 2026-02-23 13:46:39,225 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-23 09:55:47] 2026-02-23 13:46:39,225 | INFO     | aborting loop
[2026-02-23 09:55:47] 2026-02-23 13:46:39,762 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-23 09:55:47] 2026-02-23 13:46:39,873 | INFO     | all payload control threads have been joined
[2026-02-23 09:55:47] 2026-02-23 13:46:39,974 | INFO     | all data control threads have been joined
[2026-02-23 09:55:47] 2026-02-23 13:46:40,215 | INFO     | [job] retrieve thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:40,232 | INFO     | [job] queue monitor thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:40,238 | INFO     | [job] job monitor thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:40,277 | INFO     | all job control threads have been joined
[2026-02-23 09:55:47] 2026-02-23 13:46:40,329 | INFO     | [data] copytool_in thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:40,665 | INFO     | [job] create_data_payload thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:40,873 | INFO     | [job] validate thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:40,877 | INFO     | [payload] execute_payloads thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:40,879 | INFO     | [payload] control thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:40,881 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:40,881 | INFO     | [payload] validate_pre thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:40,980 | INFO     | [data] control thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:41,285 | INFO     | [job] control thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:41,670 | INFO     | [payload] validate_post thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:41,690 | INFO     | [payload] failed_post thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:41,769 | INFO     | [data] copytool_out thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:43,239 | INFO     | [data] queue_monitor thread has finished
[2026-02-23 09:55:47] 2026-02-23 13:46:54,728 | INFO     | [monitor] cgroup control has ended
[2026-02-23 09:55:47] 2026-02-23 13:46:56,172 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139876028675904)>', '<ExcThread(monitor, started 139875676321536)>']
[2026-02-23 09:55:47] 2026-02-23 13:47:01,198 | INFO     | all workflow threads have been joined
[2026-02-23 09:55:47] 2026-02-23 13:47:01,198 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-23 09:55:47] 2026-02-23 13:47:01,198 | INFO     | traces error code: 0
[2026-02-23 09:55:47] 2026-02-23 13:47:01,199 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-23 09:55:47] 2026-02-23 13:47:09,057 | INFO     | PID=2688365 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-23 09:55:47] 2026-02-23 13:47:09,069 | INFO     | .. there are 7 such processes running
[2026-02-23 09:55:47] 2026-02-23 13:47:09,070 | INFO     | found 0 job(s) in 20 queues
[2026-02-23 09:55:47] 2026-02-23 13:47:09,070 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-23 09:55:47] 2026-02-23 13:47:09,070 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-23 09:55:47] 2026-02-23 13:47:09,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-23 09:55:47] 2026-02-23 13:47:09,070 | INFO     | [monitor] control thread has ended
[2026-02-23 09:55:47] 2026-02-23 13:47:10,603 [wrapper] ==== pilot stdout END ====
[2026-02-23 09:55:47] 2026-02-23 13:47:10,620 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-23 09:55:47] 2026-02-23 13:47:10,643 [wrapper] pilotpid: 2688365
[2026-02-23 09:55:47] 2026-02-23 13:47:10,693 [wrapper] Pilot exit status: 0
[2026-02-23 09:55:47] 2026-02-23 13:47:10,862 [wrapper] pandaids: 7018913655 7018913655
[2026-02-23 09:55:47] 2026-02-23 13:47:11,386 [wrapper] cleanup supervisor_pilot 3335902 2688366
[2026-02-23 09:55:48] 2026-02-23 13:47:11,401 [wrapper] Test setup, not cleaning
[2026-02-23 09:55:48] 2026-02-23 13:47:11,420 [wrapper] apfmon messages muted
[2026-02-23 09:55:48] 2026-02-23 13:47:11,448 [wrapper] ==== wrapper stdout END ====
[2026-02-23 09:55:48] 2026-02-23 13:47:11,468 [wrapper] ==== wrapper stderr END ====
[2026-02-23 09:55:48]  *** Error codes and diagnostics ***
[2026-02-23 09:55:48]     "exeErrorCode": 0,
[2026-02-23 09:55:48]     "exeErrorDiag": "",
[2026-02-23 09:55:48]     "pilotErrorCode": 0,
[2026-02-23 09:55:48]     "pilotErrorDiag": "",
[2026-02-23 09:55:48]  *** Listing of results directory ***
[2026-02-23 09:55:48] total 1623472
[2026-02-23 09:55:48] drwx------. 5 boincer umatlas      4096 Feb  2 10:00 pilot3
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas    584627 Feb 17 21:39 pilot3.tar.gz
[2026-02-23 09:55:48] -rwx------. 1 boincer umatlas     36322 Feb 17 21:40 runpilot2-wrapper.sh
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas      5111 Feb 17 21:41 queuedata.json
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas       100 Feb 22 22:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-23 09:55:48] -rwxr-xr-x. 1 boincer umatlas      7986 Feb 22 22:09 run_atlas
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas       105 Feb 22 22:09 job.xml
[2026-02-23 09:55:48] -rw-r--r--. 3 boincer umatlas 685247099 Feb 22 22:09 EVNT.48508760._000527.pool.root.1
[2026-02-23 09:55:48] -rw-r--r--. 3 boincer umatlas 685247099 Feb 22 22:09 ATLAS.root_0
[2026-02-23 09:55:48] -rw-r--r--. 2 boincer umatlas     15845 Feb 22 22:09 start_atlas.sh
[2026-02-23 09:55:48] drwxrwx--x. 2 boincer umatlas      4096 Feb 22 22:09 shared
[2026-02-23 09:55:48] -rw-r--r--. 2 boincer umatlas    597961 Feb 22 22:09 input.tar.gz
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas         0 Feb 22 22:09 boinc_lockfile
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas      2552 Feb 23 01:30 pandaJob.out
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas        57 Feb 23 01:30 setup.sh.local
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas    998264 Feb 23 01:31 agis_schedconf.cvmfs.json
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas       441 Feb 23 01:31 workernode_map.json
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas 280259380 Feb 23 08:41 HITS.48508763._026977.pool.root.1
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas       533 Feb 23 08:42 boinc_task_state.xml
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas      1038 Feb 23 08:46 memory_monitor_summary.json
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas   1513015 Feb 23 08:46 agis_ddmendpoints.agis.ALL.json
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas    693825 Feb 23 08:46 log.48508763._026977.job.log.tgz.1
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas      6395 Feb 23 08:46 heartbeat.json
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas        96 Feb 23 08:47 pilot_heartbeat.json
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas       822 Feb 23 08:47 pilotlog.txt
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas   3180983 Feb 23 08:47 log.48508763._026977.job.log.1
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas       357 Feb 23 08:47 output.list
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas       620 Feb 23 08:47 runtime_log
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas   3891200 Feb 23 08:47 result.tar.gz
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas      9424 Feb 23 08:47 runtime_log.err
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas       781 Feb 23 08:47 AoDMDm5emC9n9Rq4apOajLDm4fhM0noT9bVooX4SDmmztKDm39zeGn.diag
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas      6661 Feb 23 09:55 init_data.xml
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas      8192 Feb 23 09:55 boinc_mmap_file
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas        29 Feb 23 09:55 wrapper_checkpoint.txt
[2026-02-23 09:55:48] -rw-r--r--. 1 boincer umatlas     23388 Feb 23 09:55 stderr.txt
[2026-02-23 09:55:48] HITS file was successfully produced:
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas 280259380 Feb 23 08:41 shared/HITS.pool.root.1
[2026-02-23 09:55:48]  *** Contents of shared directory: ***
[2026-02-23 09:55:48] total 947288
[2026-02-23 09:55:48] -rw-r--r--. 3 boincer umatlas 685247099 Feb 22 22:09 ATLAS.root_0
[2026-02-23 09:55:48] -rw-r--r--. 2 boincer umatlas     15845 Feb 22 22:09 start_atlas.sh
[2026-02-23 09:55:48] -rw-r--r--. 2 boincer umatlas    597961 Feb 22 22:09 input.tar.gz
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas 280259380 Feb 23 08:41 HITS.pool.root.1
[2026-02-23 09:55:48] -rw-------. 1 boincer umatlas   3891200 Feb 23 08:47 result.tar.gz
09:55:49 (2684615): run_atlas exited; CPU time 71418.208626
09:55:49 (2684615): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN